RNA–Protein interactions for RNA: ENST00000438748.5

POLR1B-208, Transcript of RNA polymerase I subunit B, humanhuman

TSL 4

Gene POLR1B, Length 555 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-208ENST00000438748 NISCHQ9Y2I1 1504 aa29.59■■■□□ 2.33
POLR1B-208ENST00000438748 CCDC180Q9P1Z9 1646 aa26.23■■□□□ 1.79
POLR1B-208ENST00000438748 ABCC9O60706 1549 aa25.42■■□□□ 1.66
POLR1B-208ENST00000438748 ZCCHC6Q5VYS8 1495 aaKnown RBP24.72■■□□□ 1.55
POLR1B-208ENST00000438748 DCAF8L2P0C7V8 631 aa24.7■■□□□ 1.54
POLR1B-208ENST00000438748 NACADO15069 1562 aa24.58■■□□□ 1.52
POLR1B-208ENST00000438748 RB1CC1Q8TDY2 1594 aa24.57■■□□□ 1.52
POLR1B-208ENST00000438748 DCAF1Q9Y4B6 1507 aa24.47■■□□□ 1.51
POLR1B-208ENST00000438748 MYO15BQ96JP2 1530 aa24.46■■□□□ 1.51
POLR1B-208ENST00000438748 SCRIBQ14160 1630 aa24■■□□□ 1.43
POLR1B-208ENST00000438748 UNC13AQ9UPW8 1703 aa23.98■■□□□ 1.43
POLR1B-208ENST00000438748 PABPN1Q86U42 306 aaKnown RBP eCLIP23.77■■□□□ 1.4
POLR1B-208ENST00000438748 BICRAQ9NZM4 1560 aa23.74■■□□□ 1.39
POLR1B-208ENST00000438748 SHROOM4Q9ULL8 1493 aa23.63■■□□□ 1.37
POLR1B-208ENST00000438748 EIF4G1Q04637 1599 aaKnown RBP23.14■■□□□ 1.3
POLR1B-208ENST00000438748 CECR2Q9BXF3 1484 aa23.01■■□□□ 1.27
POLR1B-208ENST00000438748 CC2D2AQ9P2K1 1620 aa22.98■■□□□ 1.27
POLR1B-208ENST00000438748 BAZ1AQ9NRL2 1556 aaPredicted RBP22.96■■□□□ 1.27
POLR1B-208ENST00000438748 DNAJC5BQ9UF47 199 aa22.95■■□□□ 1.26
POLR1B-208ENST00000438748 SMARCA4P51532 1647 aa22.94■■□□□ 1.26
POLR1B-208ENST00000438748 MROH2BQ7Z745 1585 aa22.81■■□□□ 1.24
POLR1B-208ENST00000438748 SMARCA2P51531 1590 aa22.74■■□□□ 1.23
POLR1B-208ENST00000438748 ATAD2BQ9ULI0 1458 aa22.71■■□□□ 1.23
POLR1B-208ENST00000438748 PEG3Q9GZU2 1588 aa22.66■■□□□ 1.22
POLR1B-208ENST00000438748 RSF1Q96T23 1441 aaPredicted RBP22.64■■□□□ 1.21
POLR1B-208ENST00000438748 NCAPD3P42695 1498 aa22.63■■□□□ 1.21
POLR1B-208ENST00000438748 WIZO95785 1651 aa22.61■■□□□ 1.21
POLR1B-208ENST00000438748 BAZ1BQ9UIG0 1483 aaKnown RBP22.6■■□□□ 1.21
POLR1B-208ENST00000438748 HMGXB3Q12766 1538 aa22.59■■□□□ 1.21
POLR1B-208ENST00000438748 TOP2AP11388 1531 aaKnown RBP22.4■■□□□ 1.18
POLR1B-208ENST00000438748 SUPT5HO00267 1087 aaKnown RBP22.36■■□□□ 1.17
POLR1B-208ENST00000438748 CCDC88BA6NC98 1476 aa22.09■■□□□ 1.13
POLR1B-208ENST00000438748 LAMC3Q9Y6N6 1575 aa22.05■■□□□ 1.12
POLR1B-208ENST00000438748 NESP48681 1621 aa22.04■■□□□ 1.12
POLR1B-208ENST00000438748 CADPSQ9ULU8 1353 aa22■■□□□ 1.11
POLR1B-208ENST00000438748 ERCC6Q03468 1493 aa21.94■■□□□ 1.1
POLR1B-208ENST00000438748 CFTRP13569 1480 aa21.93■■□□□ 1.1
POLR1B-208ENST00000438748 PDS5BQ9NTI5 1447 aa21.89■■□□□ 1.1
POLR1B-208ENST00000438748 PRDM2Q13029 1718 aa21.86■■□□□ 1.09
POLR1B-208ENST00000438748 KIF21AQ7Z4S6 1674 aa21.83■■□□□ 1.09
POLR1B-208ENST00000438748 FANCD2Q9BXW9 1451 aa21.8■■□□□ 1.08
POLR1B-208ENST00000438748 CEP164Q9UPV0 1460 aa21.77■■□□□ 1.08
POLR1B-208ENST00000438748 THOC2Q8NI27 1593 aaKnown RBP21.67■■□□□ 1.06
POLR1B-208ENST00000438748 MRC2Q9UBG0 1479 aa21.67■■□□□ 1.06
POLR1B-208ENST00000438748 WDR62O43379 1518 aa21.56■■□□□ 1.04
POLR1B-208ENST00000438748 CUX2O14529 1486 aa21.54■■□□□ 1.04
POLR1B-208ENST00000438748 URB2Q14146 1524 aaKnown RBP21.54■■□□□ 1.04
POLR1B-208ENST00000438748 ABCC8Q09428 1581 aa21.48■■□□□ 1.03
POLR1B-208ENST00000438748 DNMBPQ6XZF7 1577 aa21.48■■□□□ 1.03
POLR1B-208ENST00000438748 TOPBP1Q92547 1522 aa21.47■■□□□ 1.03
POLR1B-208ENST00000438748 CUX1P39880 1505 aa21.4■■□□□ 1.02
POLR1B-208ENST00000438748 WRNQ14191 1432 aaPredicted RBP eCLIP21.39■■□□□ 1.02
POLR1B-208ENST00000438748 FGD5Q6ZNL6 1462 aa21.32■■□□□ 1
POLR1B-208ENST00000438748 SYNJ1O43426 1573 aa21.31■■□□□ 1
POLR1B-208ENST00000438748 BIVM-ERCC5R4GMW8 1640 aa21.3■■□□□ 1
POLR1B-208ENST00000438748 POLA1P09884 1462 aaPredicted RBP21.3■■□□□ 1
POLR1B-208ENST00000438748 TOP2BQ02880 1626 aa21.29■■□□□ 1
POLR1B-208ENST00000438748 IFT140Q96RY7 1462 aa21.28■■□□□ 1
POLR1B-208ENST00000438748 SOGA1O94964 1423 aa21.22■□□□□ 0.99
POLR1B-208ENST00000438748 RAD54L2Q9Y4B4 1467 aa21.2■□□□□ 0.98
POLR1B-208ENST00000438748 TARBP1Q13395 1621 aaKnown RBP21.19■□□□□ 0.98
POLR1B-208ENST00000438748 ZNF608Q9ULD9 1512 aaPredicted RBP21.13■□□□□ 0.97
POLR1B-208ENST00000438748 WDR97A6NE52 1622 aa21.11■□□□□ 0.97
POLR1B-208ENST00000438748 EIF4G3O43432 1585 aaKnown RBP21.11■□□□□ 0.97
POLR1B-208ENST00000438748 TRIM41Q8WV44 630 aa21.09■□□□□ 0.97
POLR1B-208ENST00000438748 ABCA10Q8WWZ4 1543 aa21.09■□□□□ 0.97
POLR1B-208ENST00000438748 TDRD9Q8NDG6 1382 aaKnown RBP21.06■□□□□ 0.96
POLR1B-208ENST00000438748 AQRO60306 1485 aaKnown RBP eCLIP21.05■□□□□ 0.964e-6■■■■■ 31
POLR1B-208ENST00000438748 GAPVD1Q14C86 1478 aa21■□□□□ 0.95
POLR1B-208ENST00000438748 ABCA5Q8WWZ7 1642 aa21■□□□□ 0.95
POLR1B-208ENST00000438748 PBRM1Q86U86 1689 aa20.97■□□□□ 0.95
POLR1B-208ENST00000438748 GRIN2BQ13224 1484 aa20.95■□□□□ 0.94
POLR1B-208ENST00000438748 CHIC1Q5VXU3 224 aa20.95■□□□□ 0.94
POLR1B-208ENST00000438748 KIF27Q86VH2 1401 aa20.94■□□□□ 0.94
POLR1B-208ENST00000438748 SNAPC4Q5SXM2 1469 aa20.91■□□□□ 0.94
POLR1B-208ENST00000438748 MAGI1Q96QZ7 1491 aaPredicted RBP20.87■□□□□ 0.93
POLR1B-208ENST00000438748 ERICH3Q5RHP9 1530 aa20.86■□□□□ 0.93
POLR1B-208ENST00000438748 FBLN2P98095 1184 aa20.82■□□□□ 0.92
POLR1B-208ENST00000438748 ADAMTS12P58397 1594 aa20.8■□□□□ 0.92
POLR1B-208ENST00000438748 CHD1O14646 1710 aa20.79■□□□□ 0.92
POLR1B-208ENST00000438748 SYNJ2O15056 1496 aa20.78■□□□□ 0.92
POLR1B-208ENST00000438748 CHMP7Q8WUX9 453 aaPredicted RBP20.77■□□□□ 0.92
POLR1B-208ENST00000438748 RUSC2Q8N2Y8 1516 aa20.77■□□□□ 0.92
POLR1B-208ENST00000438748 FHAD1B1AJZ9 1412 aa20.76■□□□□ 0.91
POLR1B-208ENST00000438748 CUL7Q14999 1698 aa20.76■□□□□ 0.91
POLR1B-208ENST00000438748 IGF1RP08069 1367 aa20.73■□□□□ 0.91
POLR1B-208ENST00000438748 EEA1Q15075 1411 aa20.71■□□□□ 0.91
POLR1B-208ENST00000438748 GRIN2AQ12879 1464 aa20.69■□□□□ 0.9
POLR1B-208ENST00000438748 OSCARQ8IYS5 282 aa20.68■□□□□ 0.9
POLR1B-208ENST00000438748 FAM9AQ8IZU1 332 aaPredicted RBP20.68■□□□□ 0.9
POLR1B-208ENST00000438748 CARMIL1Q5VZK9 1371 aa20.67■□□□□ 0.9
POLR1B-208ENST00000438748 CSRNP3Q8WYN3 585 aa20.61■□□□□ 0.89
POLR1B-208ENST00000438748 RAPGEF2Q9Y4G8 1499 aa20.59■□□□□ 0.89
POLR1B-208ENST00000438748 CEP170Q5SW79 1584 aa20.56■□□□□ 0.88
POLR1B-208ENST00000438748 NUP160Q12769 1436 aa20.54■□□□□ 0.88
POLR1B-208ENST00000438748 PRXQ9BXM0 1461 aa20.54■□□□□ 0.88
POLR1B-208ENST00000438748 CLASP1Q7Z460 1538 aa20.53■□□□□ 0.88
POLR1B-208ENST00000438748 DNAJC5Q9H3Z4 198 aa20.48■□□□□ 0.87
POLR1B-208ENST00000438748 KIF21BO75037 1637 aa20.48■□□□□ 0.87
POLR1B-208ENST00000438748 EHMT2Q96KQ7 1210 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms