RNA–Protein interactions for RNA: ENST00000342449.7

BRWD1-203, Transcript of bromodomain and WD repeat domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene BRWD1, Length 12,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRWD1-203ENST00000342449 DCAF8L2P0C7V8 631 aa12.4□□□□□ -0.42
BRWD1-203ENST00000342449 SUPT5HO00267 1087 aaKnown RBP11.68□□□□□ -0.54
BRWD1-203ENST00000342449 EHMT2Q96KQ7 1210 aa11.51□□□□□ -0.57
BRWD1-203ENST00000342449 SHROOM4Q9ULL8 1493 aa11.42□□□□□ -0.58
BRWD1-203ENST00000342449 PELP1Q8IZL8 1130 aaKnown RBP11.38□□□□□ -0.59
BRWD1-203ENST00000342449 APLP2Q06481 763 aa11.27□□□□□ -0.61
BRWD1-203ENST00000342449 NISCHQ9Y2I1 1504 aa11.21□□□□□ -0.62
BRWD1-203ENST00000342449 FAM9AQ8IZU1 332 aaPredicted RBP11.14□□□□□ -0.63
BRWD1-203ENST00000342449 TTBK1Q5TCY1 1321 aaPredicted RBP11.11□□□□□ -0.63
BRWD1-203ENST00000342449 RANGAP1P46060 587 aaPredicted RBP10.99□□□□□ -0.65
BRWD1-203ENST00000342449 ERICH6Q7L0X2 663 aa10.99□□□□□ -0.65
BRWD1-203ENST00000342449 PCGF6Q9BYE7 350 aa10.97□□□□□ -0.65
BRWD1-203ENST00000342449 ATP1B4Q9UN42 357 aaPredicted RBP10.94□□□□□ -0.66
BRWD1-203ENST00000342449 CCER1Q8TC90 406 aaPredicted RBP10.89□□□□□ -0.67
BRWD1-203ENST00000342449 CENPBP07199 599 aaPredicted RBP10.86□□□□□ -0.67
BRWD1-203ENST00000342449 TRIM41Q8WV44 630 aa10.79□□□□□ -0.68
BRWD1-203ENST00000342449 ZEB1P37275 1124 aaPredicted RBP10.78□□□□□ -0.68
BRWD1-203ENST00000342449 UBTFP17480 764 aaKnown RBP10.75□□□□□ -0.69
BRWD1-203ENST00000342449 NEFLP07196 543 aa10.72□□□□□ -0.69
BRWD1-203ENST00000342449 YTHDC1Q96MU7 727 aaKnown RBP10.69□□□□□ -0.7
BRWD1-203ENST00000342449 PPARGC1BQ86YN6 1023 aaKnown RBP10.59□□□□□ -0.71
BRWD1-203ENST00000342449 MYT1LQ9UL68 1186 aa10.58□□□□□ -0.72
BRWD1-203ENST00000342449 POLR3GLQ9BT43 218 aa10.53□□□□□ -0.72
BRWD1-203ENST00000342449 DAXXQ9UER7 740 aaPredicted RBP10.51□□□□□ -0.73
BRWD1-203ENST00000342449 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.51□□□□□ -0.73
BRWD1-203ENST00000342449 HNRNPUL2Q1KMD3 747 aaKnown RBP10.51□□□□□ -0.73
BRWD1-203ENST00000342449 ITGAEP38570 1179 aa10.49□□□□□ -0.73
BRWD1-203ENST00000342449 MYT1Q01538 1121 aa10.45□□□□□ -0.74
BRWD1-203ENST00000342449 CNGB1Q14028 1251 aaPredicted RBP10.43□□□□□ -0.74
BRWD1-203ENST00000342449 CHIC1Q5VXU3 224 aa10.42□□□□□ -0.74
BRWD1-203ENST00000342449 TRIM26Q12899 539 aaPredicted RBP10.4□□□□□ -0.74
BRWD1-203ENST00000342449 SLC4A1APQ9BWU0 796 aaKnown RBP10.39□□□□□ -0.75
BRWD1-203ENST00000342449 HRCP23327 699 aa10.29□□□□□ -0.76
BRWD1-203ENST00000342449 LOC105371045A0A1W2PR82 267 aa10.26□□□□□ -0.77
BRWD1-203ENST00000342449 CLSPNQ9HAW4 1339 aa10.26□□□□□ -0.77
BRWD1-203ENST00000342449 ZNF316A6NFI3 1004 aaPredicted RBP10.25□□□□□ -0.77
BRWD1-203ENST00000342449 RTL5Q5HYW3 569 aaPredicted RBP10.19□□□□□ -0.78
BRWD1-203ENST00000342449 FAM50AQ14320 339 aaKnown RBP10.18□□□□□ -0.78
BRWD1-203ENST00000342449 TRIM52Q96A61 297 aa10.17□□□□□ -0.78
BRWD1-203ENST00000342449 NEUROD1Q13562 356 aa10.12□□□□□ -0.79
BRWD1-203ENST00000342449 DIEXFQ68CQ4 756 aaKnown RBP10.12□□□□□ -0.79
BRWD1-203ENST00000342449 SLC24A1O60721 1099 aa10.07□□□□□ -0.8
BRWD1-203ENST00000342449 ZBTB47Q9UFB7 747 aaPredicted RBP10.07□□□□□ -0.8
BRWD1-203ENST00000342449 ZNF326Q5BKZ1 582 aaKnown RBP10.06□□□□□ -0.8
BRWD1-203ENST00000342449 BCANQ96GW7 911 aa10.05□□□□□ -0.8
BRWD1-203ENST00000342449 BCL11AQ9H165 835 aa10.04□□□□□ -0.8
BRWD1-203ENST00000342449 ANP32CO43423 234 aa10.01□□□□□ -0.81
BRWD1-203ENST00000342449 FBLN2P98095 1184 aa10□□□□□ -0.81
BRWD1-203ENST00000342449 PABPN1Q86U42 306 aaKnown RBP eCLIP10□□□□□ -0.81
BRWD1-203ENST00000342449 CANXP27824 592 aaKnown RBP9.99□□□□□ -0.81
BRWD1-203ENST00000342449 CDK11AQ9UQ88 783 aaPredicted RBP9.98□□□□□ -0.81
BRWD1-203ENST00000342449 NEFMP07197 916 aa9.95□□□□□ -0.82
BRWD1-203ENST00000342449 GTF3C3Q9Y5Q9 886 aa9.91□□□□□ -0.82
BRWD1-203ENST00000342449 ARID3CA6NKF2 412 aa9.9□□□□□ -0.82
BRWD1-203ENST00000342449 ABCC9O60706 1549 aa9.88□□□□□ -0.83
BRWD1-203ENST00000342449 P3H3Q8IVL6 736 aa9.88□□□□□ -0.83
BRWD1-203ENST00000342449 ZNF777Q9ULD5 760 aaPredicted RBP9.86□□□□□ -0.83
BRWD1-203ENST00000342449 NPM2Q86SE8 214 aaKnown RBP9.83□□□□□ -0.84
BRWD1-203ENST00000342449 ANP32AP39687 249 aaKnown RBP9.82□□□□□ -0.84
BRWD1-203ENST00000342449 PLPPR3Q6T4P5 718 aa9.81□□□□□ -0.84
BRWD1-203ENST00000342449 ESF1Q9H501 851 aaKnown RBP9.81□□□□□ -0.84
BRWD1-203ENST00000342449 CHGAP10645 457 aaKnown RBP9.79□□□□□ -0.84
BRWD1-203ENST00000342449 STAG3Q9UJ98 1225 aa9.79□□□□□ -0.84
BRWD1-203ENST00000342449 HSP90AA1P07900 732 aaKnown RBP9.76□□□□□ -0.85
BRWD1-203ENST00000342449 ANP32BQ92688 251 aaKnown RBP9.75□□□□□ -0.85
BRWD1-203ENST00000342449 CSRNP3Q8WYN3 585 aa9.7□□□□□ -0.86
BRWD1-203ENST00000342449 SALL2Q9Y467 1007 aaPredicted RBP9.7□□□□□ -0.86
BRWD1-203ENST00000342449 UPF2Q9HAU5 1272 aaKnown RBP9.7□□□□□ -0.86
BRWD1-203ENST00000342449 FKBP8Q14318 412 aa9.69□□□□□ -0.86
BRWD1-203ENST00000342449 ACIN1Q9UKV3 1341 aaKnown RBP9.69□□□□□ -0.86
BRWD1-203ENST00000342449 FAM9BQ8IZU0 186 aa9.68□□□□□ -0.86
BRWD1-203ENST00000342449 TONSLQ96HA7 1378 aa9.68□□□□□ -0.86
BRWD1-203ENST00000342449 EIF5BO60841 1220 aaKnown RBP9.67□□□□□ -0.86
BRWD1-203ENST00000342449 HNRNPUQ00839 825 aaKnown RBP eCLIP9.66□□□□□ -0.86
BRWD1-203ENST00000342449 NPM1P06748 294 aaKnown RBP eCLIP9.66□□□□□ -0.86
BRWD1-203ENST00000342449 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.66□□□□□ -0.861e-6■■□□□ 11.6
BRWD1-203ENST00000342449 SCAF1Q9H7N4 1312 aaKnown RBP9.65□□□□□ -0.87
BRWD1-203ENST00000342449 DDX10Q13206 875 aaKnown RBP9.63□□□□□ -0.87
BRWD1-203ENST00000342449 CHIC2Q9UKJ5 165 aa9.62□□□□□ -0.87
BRWD1-203ENST00000342449 TMC1Q8TDI8 760 aa9.62□□□□□ -0.87
BRWD1-203ENST00000342449 WDR43Q15061 677 aaKnown RBP eCLIP9.61□□□□□ -0.87
BRWD1-203ENST00000342449 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.61□□□□□ -0.87
BRWD1-203ENST00000342449 A0A0G2JS52 829 aa9.6□□□□□ -0.87
BRWD1-203ENST00000342449 ARXQ96QS3 562 aa9.59□□□□□ -0.87
BRWD1-203ENST00000342449 KDM2AQ9Y2K7 1162 aa9.59□□□□□ -0.87
BRWD1-203ENST00000342449 CCDC136Q96JN2 1154 aa9.59□□□□□ -0.87
BRWD1-203ENST00000342449 NBR1Q14596 966 aa9.58□□□□□ -0.88
BRWD1-203ENST00000342449 ZBTB7CA1YPR0 619 aa9.57□□□□□ -0.88
BRWD1-203ENST00000342449 PLEKHG5O94827 1062 aa9.57□□□□□ -0.88
BRWD1-203ENST00000342449 SENP3Q9H4L4 574 aaPredicted RBP9.55□□□□□ -0.88
BRWD1-203ENST00000342449 MYH16Q9H6N6 1097 aa9.54□□□□□ -0.88
BRWD1-203ENST00000342449 TSPY4P0CV99 314 aa9.54□□□□□ -0.88
BRWD1-203ENST00000342449 TSPY10P0CW01 314 aa9.54□□□□□ -0.88
BRWD1-203ENST00000342449 CDK11BP21127 795 aaKnown RBP9.54□□□□□ -0.88
BRWD1-203ENST00000342449 C14orf37Q86TY3 774 aa9.53□□□□□ -0.88
BRWD1-203ENST00000342449 MRS2Q9HD23 443 aa9.53□□□□□ -0.88
BRWD1-203ENST00000342449 SCRIBQ14160 1630 aa9.51□□□□□ -0.89
BRWD1-203ENST00000342449 IRX6P78412 446 aaPredicted RBP9.5□□□□□ -0.89
BRWD1-203ENST00000342449 GLIPR1L2Q4G1C9 344 aa9.5□□□□□ -0.89
BRWD1-203ENST00000342449 HIRIP3Q9BW71 556 aaPredicted RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms