RNA–Protein interactions for RNA: ENST00000495645.5

CHPF2-204, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 2 BASIC

Gene CHPF2, Length 2,709 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-204ENST00000495645 NISCHQ9Y2I1 1504 aa32.66■■■□□ 2.82
CHPF2-204ENST00000495645 CCDC180Q9P1Z9 1646 aa28.03■■■□□ 2.08
CHPF2-204ENST00000495645 DCAF8L2P0C7V8 631 aa27.7■■■□□ 2.03
CHPF2-204ENST00000495645 SHROOM4Q9ULL8 1493 aa27.59■■■□□ 2.01
CHPF2-204ENST00000495645 ZCCHC6Q5VYS8 1495 aaKnown RBP27.43■■□□□ 1.98
CHPF2-204ENST00000495645 ABCC9O60706 1549 aa27■■□□□ 1.91
CHPF2-204ENST00000495645 SUPT5HO00267 1087 aaKnown RBP26.63■■□□□ 1.85
CHPF2-204ENST00000495645 DCAF1Q9Y4B6 1507 aa26.62■■□□□ 1.85
CHPF2-204ENST00000495645 SCRIBQ14160 1630 aa26.34■■□□□ 1.81
CHPF2-204ENST00000495645 MYO15BQ96JP2 1530 aa26.29■■□□□ 1.8
CHPF2-204ENST00000495645 NACADO15069 1562 aa26.21■■□□□ 1.79
CHPF2-204ENST00000495645 RB1CC1Q8TDY2 1594 aa26.13■■□□□ 1.77
CHPF2-204ENST00000495645 PABPN1Q86U42 306 aaKnown RBP eCLIP25.77■■□□□ 1.72
CHPF2-204ENST00000495645 CECR2Q9BXF3 1484 aa25.7■■□□□ 1.71
CHPF2-204ENST00000495645 RSF1Q96T23 1441 aaPredicted RBP25.61■■□□□ 1.69
CHPF2-204ENST00000495645 UNC13AQ9UPW8 1703 aa25.61■■□□□ 1.69
CHPF2-204ENST00000495645 MROH2BQ7Z745 1585 aa25.45■■□□□ 1.66
CHPF2-204ENST00000495645 BICRAQ9NZM4 1560 aa25.37■■□□□ 1.65
CHPF2-204ENST00000495645 CHIC1Q5VXU3 224 aa25.36■■□□□ 1.65
CHPF2-204ENST00000495645 WIZO95785 1651 aa25.23■■□□□ 1.63
CHPF2-204ENST00000495645 BAZ1AQ9NRL2 1556 aaPredicted RBP25.09■■□□□ 1.61
CHPF2-204ENST00000495645 SMARCA4P51532 1647 aa25.01■■□□□ 1.59
CHPF2-204ENST00000495645 TRIM41Q8WV44 630 aa24.74■■□□□ 1.55
CHPF2-204ENST00000495645 LOC105371045A0A1W2PR82 267 aa24.74■■□□□ 1.55
CHPF2-204ENST00000495645 CCDC88BA6NC98 1476 aa24.72■■□□□ 1.55
CHPF2-204ENST00000495645 TOP2AP11388 1531 aaKnown RBP24.71■■□□□ 1.55
CHPF2-204ENST00000495645 FAM9AQ8IZU1 332 aaPredicted RBP24.7■■□□□ 1.55
CHPF2-204ENST00000495645 EHMT2Q96KQ7 1210 aa24.66■■□□□ 1.54
CHPF2-204ENST00000495645 ATAD2BQ9ULI0 1458 aa24.66■■□□□ 1.54
CHPF2-204ENST00000495645 EIF4G1Q04637 1599 aaKnown RBP24.61■■□□□ 1.53
CHPF2-204ENST00000495645 SMARCA2P51531 1590 aa24.6■■□□□ 1.53
CHPF2-204ENST00000495645 BAZ1BQ9UIG0 1483 aaKnown RBP24.52■■□□□ 1.52
CHPF2-204ENST00000495645 PEG3Q9GZU2 1588 aa24.48■■□□□ 1.51
CHPF2-204ENST00000495645 ABCC8Q09428 1581 aa24.45■■□□□ 1.51
CHPF2-204ENST00000495645 CC2D2AQ9P2K1 1620 aa24.44■■□□□ 1.5
CHPF2-204ENST00000495645 DNAJC5BQ9UF47 199 aa24.42■■□□□ 1.5
CHPF2-204ENST00000495645 NCAPD3P42695 1498 aa24.26■■□□□ 1.47
CHPF2-204ENST00000495645 HMGXB3Q12766 1538 aa24.1■■□□□ 1.45
CHPF2-204ENST00000495645 SOGA1O94964 1423 aa24.09■■□□□ 1.45
CHPF2-204ENST00000495645 WRNQ14191 1432 aaPredicted RBP eCLIP24.06■■□□□ 1.44
CHPF2-204ENST00000495645 RUSC2Q8N2Y8 1516 aa24.05■■□□□ 1.44
CHPF2-204ENST00000495645 SYNJ1O43426 1573 aa23.97■■□□□ 1.43
CHPF2-204ENST00000495645 CFTRP13569 1480 aa23.85■■□□□ 1.41
CHPF2-204ENST00000495645 NESP48681 1621 aa23.81■■□□□ 1.4
CHPF2-204ENST00000495645 CSRNP3Q8WYN3 585 aa23.81■■□□□ 1.4
CHPF2-204ENST00000495645 PCGF6Q9BYE7 350 aa23.81■■□□□ 1.4
CHPF2-204ENST00000495645 CADPSQ9ULU8 1353 aa23.81■■□□□ 1.4
CHPF2-204ENST00000495645 PPARGC1BQ86YN6 1023 aaKnown RBP23.8■■□□□ 1.4
CHPF2-204ENST00000495645 UBTFP17480 764 aaKnown RBP23.73■■□□□ 1.39
CHPF2-204ENST00000495645 CUX1P39880 1505 aa23.71■■□□□ 1.39
CHPF2-204ENST00000495645 RANGAP1P46060 587 aaPredicted RBP23.7■■□□□ 1.39
CHPF2-204ENST00000495645 TOP2BQ02880 1626 aa23.63■■□□□ 1.37
CHPF2-204ENST00000495645 HRCP23327 699 aa23.63■■□□□ 1.37
CHPF2-204ENST00000495645 TTBK1Q5TCY1 1321 aaPredicted RBP23.59■■□□□ 1.37
CHPF2-204ENST00000495645 FANCD2Q9BXW9 1451 aa23.57■■□□□ 1.36
CHPF2-204ENST00000495645 EEA1Q15075 1411 aa23.51■■□□□ 1.35
CHPF2-204ENST00000495645 BIVM-ERCC5R4GMW8 1640 aa23.5■■□□□ 1.35
CHPF2-204ENST00000495645 LAMC3Q9Y6N6 1575 aa23.5■■□□□ 1.35
CHPF2-204ENST00000495645 RAPGEF2Q9Y4G8 1499 aa23.49■■□□□ 1.35
CHPF2-204ENST00000495645 CEP162Q5TB80 1403 aa23.48■■□□□ 1.35
CHPF2-204ENST00000495645 FGD5Q6ZNL6 1462 aa23.43■■□□□ 1.34
CHPF2-204ENST00000495645 GOLGA3Q08378 1498 aa23.43■■□□□ 1.34
CHPF2-204ENST00000495645 TNIKQ9UKE5 1360 aa23.42■■□□□ 1.34
CHPF2-204ENST00000495645 RAD54L2Q9Y4B4 1467 aa23.4■■□□□ 1.34
CHPF2-204ENST00000495645 CUX2O14529 1486 aa23.39■■□□□ 1.33
CHPF2-204ENST00000495645 CEP164Q9UPV0 1460 aa23.37■■□□□ 1.33
CHPF2-204ENST00000495645 PRDM2Q13029 1718 aa23.35■■□□□ 1.33
CHPF2-204ENST00000495645 TRIM26Q12899 539 aaPredicted RBP23.35■■□□□ 1.33
CHPF2-204ENST00000495645 KIF27Q86VH2 1401 aa23.35■■□□□ 1.33
CHPF2-204ENST00000495645 TOPBP1Q92547 1522 aa23.31■■□□□ 1.32
CHPF2-204ENST00000495645 URB2Q14146 1524 aaKnown RBP23.3■■□□□ 1.32
CHPF2-204ENST00000495645 POLA1P09884 1462 aaPredicted RBP23.27■■□□□ 1.32
CHPF2-204ENST00000495645 IGF1RP08069 1367 aa23.27■■□□□ 1.32
CHPF2-204ENST00000495645 KIF21BO75037 1637 aa23.25■■□□□ 1.31
CHPF2-204ENST00000495645 PRXQ9BXM0 1461 aa23.25■■□□□ 1.31
CHPF2-204ENST00000495645 PDS5BQ9NTI5 1447 aa23.25■■□□□ 1.31
CHPF2-204ENST00000495645 TDRD9Q8NDG6 1382 aaKnown RBP23.22■■□□□ 1.31
CHPF2-204ENST00000495645 CLIP1P30622 1438 aa23.22■■□□□ 1.31
CHPF2-204ENST00000495645 DNMBPQ6XZF7 1577 aa23.2■■□□□ 1.31
CHPF2-204ENST00000495645 KIF21AQ7Z4S6 1674 aa23.2■■□□□ 1.3
CHPF2-204ENST00000495645 THOC2Q8NI27 1593 aaKnown RBP23.16■■□□□ 1.3
CHPF2-204ENST00000495645 CARMIL1Q5VZK9 1371 aa23.13■■□□□ 1.29
CHPF2-204ENST00000495645 ERCC6Q03468 1493 aa23.07■■□□□ 1.28
CHPF2-204ENST00000495645 P3H3Q8IVL6 736 aa23.07■■□□□ 1.28
CHPF2-204ENST00000495645 ABCA10Q8WWZ4 1543 aa23.05■■□□□ 1.28
CHPF2-204ENST00000495645 ERICH3Q5RHP9 1530 aa23.03■■□□□ 1.28
CHPF2-204ENST00000495645 WDR62O43379 1518 aa23.02■■□□□ 1.28
CHPF2-204ENST00000495645 MRC2Q9UBG0 1479 aa22.99■■□□□ 1.27
CHPF2-204ENST00000495645 AQRO60306 1485 aaKnown RBP eCLIP22.98■■□□□ 1.274e-7■■■□□ 15.2
CHPF2-204ENST00000495645 ARAP1Q96P48 1450 aa22.97■■□□□ 1.27
CHPF2-204ENST00000495645 VPS8Q8N3P4 1428 aa22.95■■□□□ 1.26
CHPF2-204ENST00000495645 GAPVD1Q14C86 1478 aa22.92■■□□□ 1.26
CHPF2-204ENST00000495645 ZNF608Q9ULD9 1512 aaPredicted RBP22.9■■□□□ 1.26
CHPF2-204ENST00000495645 ARHGAP35Q9NRY4 1499 aa22.9■■□□□ 1.26
CHPF2-204ENST00000495645 KANK4Q5T7N3 995 aaPredicted RBP22.88■■□□□ 1.25
CHPF2-204ENST00000495645 APLP2Q06481 763 aa22.88■■□□□ 1.25
CHPF2-204ENST00000495645 ATP1B4Q9UN42 357 aaPredicted RBP22.85■■□□□ 1.25
CHPF2-204ENST00000495645 TARBP1Q13395 1621 aaKnown RBP22.84■■□□□ 1.25
CHPF2-204ENST00000495645 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.82■■□□□ 1.24
CHPF2-204ENST00000495645 WDR97A6NE52 1622 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms