RNA–Protein interactions for RNA: ENST00000333229.6

BRWD1-201, Transcript of bromodomain and WD repeat domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRWD1, Length 10,141 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRWD1-201ENST00000333229 PELP1Q8IZL8 1130 aaKnown RBP22.5■■□□□ 1.19
BRWD1-201ENST00000333229 DCAF8L2P0C7V8 631 aa22.26■■□□□ 1.15
BRWD1-201ENST00000333229 MYT1Q01538 1121 aa22.01■■□□□ 1.11
BRWD1-201ENST00000333229 ERICH6Q7L0X2 663 aa21.49■■□□□ 1.03
BRWD1-201ENST00000333229 CCER1Q8TC90 406 aaPredicted RBP21.33■■□□□ 1
BRWD1-201ENST00000333229 EHMT2Q96KQ7 1210 aa21.02■□□□□ 0.96
BRWD1-201ENST00000333229 TTBK1Q5TCY1 1321 aaPredicted RBP20.9■□□□□ 0.94
BRWD1-201ENST00000333229 SUPT5HO00267 1087 aaKnown RBP20.9■□□□□ 0.94
BRWD1-201ENST00000333229 CENPBP07199 599 aaPredicted RBP20.81■□□□□ 0.92
BRWD1-201ENST00000333229 YTHDC1Q96MU7 727 aaKnown RBP20.81■□□□□ 0.92
BRWD1-201ENST00000333229 SHROOM4Q9ULL8 1493 aa20.47■□□□□ 0.87
BRWD1-201ENST00000333229 APLP2Q06481 763 aa20.43■□□□□ 0.86
BRWD1-201ENST00000333229 NEFLP07196 543 aa20.37■□□□□ 0.85
BRWD1-201ENST00000333229 DAXXQ9UER7 740 aaPredicted RBP20.21■□□□□ 0.83
BRWD1-201ENST00000333229 FAM9AQ8IZU1 332 aaPredicted RBP20.13■□□□□ 0.81
BRWD1-201ENST00000333229 ZEB1P37275 1124 aaPredicted RBP20.08■□□□□ 0.8
BRWD1-201ENST00000333229 RANGAP1P46060 587 aaPredicted RBP20■□□□□ 0.79
BRWD1-201ENST00000333229 PCGF6Q9BYE7 350 aa19.92■□□□□ 0.78
BRWD1-201ENST00000333229 RTL5Q5HYW3 569 aaPredicted RBP19.92■□□□□ 0.78
BRWD1-201ENST00000333229 ATP1B4Q9UN42 357 aaPredicted RBP19.84■□□□□ 0.77
BRWD1-201ENST00000333229 ZNF316A6NFI3 1004 aaPredicted RBP19.67■□□□□ 0.74
BRWD1-201ENST00000333229 GLIPR1L2Q4G1C9 344 aa19.62■□□□□ 0.73
BRWD1-201ENST00000333229 POLR3GLQ9BT43 218 aa19.35■□□□□ 0.69
BRWD1-201ENST00000333229 UBTFP17480 764 aaKnown RBP19.32■□□□□ 0.68
BRWD1-201ENST00000333229 MYT1LQ9UL68 1186 aa19.29■□□□□ 0.68
BRWD1-201ENST00000333229 NISCHQ9Y2I1 1504 aa19.27■□□□□ 0.68
BRWD1-201ENST00000333229 EIF5BO60841 1220 aaKnown RBP19.26■□□□□ 0.67
BRWD1-201ENST00000333229 CHIC1Q5VXU3 224 aa19.22■□□□□ 0.67
BRWD1-201ENST00000333229 CNGB1Q14028 1251 aaPredicted RBP19.19■□□□□ 0.66
BRWD1-201ENST00000333229 TRIM41Q8WV44 630 aa19.18■□□□□ 0.66
BRWD1-201ENST00000333229 CLSPNQ9HAW4 1339 aa19.16■□□□□ 0.66
BRWD1-201ENST00000333229 PPARGC1BQ86YN6 1023 aaKnown RBP19.14■□□□□ 0.66
BRWD1-201ENST00000333229 SLC4A1APQ9BWU0 796 aaKnown RBP19.1■□□□□ 0.65
BRWD1-201ENST00000333229 ITGAEP38570 1179 aa19■□□□□ 0.63
BRWD1-201ENST00000333229 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.99■□□□□ 0.63
BRWD1-201ENST00000333229 HNRNPUL2Q1KMD3 747 aaKnown RBP18.99■□□□□ 0.63
BRWD1-201ENST00000333229 ANP32BQ92688 251 aaKnown RBP18.92■□□□□ 0.62
BRWD1-201ENST00000333229 HRCP23327 699 aa18.88■□□□□ 0.61
BRWD1-201ENST00000333229 CDK11AQ9UQ88 783 aaPredicted RBP18.85■□□□□ 0.61
BRWD1-201ENST00000333229 ANP32AP39687 249 aaKnown RBP18.75■□□□□ 0.59
BRWD1-201ENST00000333229 TNNT2P45379 298 aaPredicted RBP18.72■□□□□ 0.59
BRWD1-201ENST00000333229 BCL11AQ9H165 835 aa18.68■□□□□ 0.58
BRWD1-201ENST00000333229 TRIM26Q12899 539 aaPredicted RBP18.64■□□□□ 0.57
BRWD1-201ENST00000333229 ZBTB47Q9UFB7 747 aaPredicted RBP18.63■□□□□ 0.57
BRWD1-201ENST00000333229 GTF3C3Q9Y5Q9 886 aa18.61■□□□□ 0.57
BRWD1-201ENST00000333229 SLC24A1O60721 1099 aa18.58■□□□□ 0.56
BRWD1-201ENST00000333229 DIEXFQ68CQ4 756 aaKnown RBP18.57■□□□□ 0.56
BRWD1-201ENST00000333229 BCANQ96GW7 911 aa18.55■□□□□ 0.56
BRWD1-201ENST00000333229 CDK11BP21127 795 aaKnown RBP18.5■□□□□ 0.55
BRWD1-201ENST00000333229 CANXP27824 592 aaKnown RBP18.39■□□□□ 0.53
BRWD1-201ENST00000333229 HSP90AA1P07900 732 aaKnown RBP18.37■□□□□ 0.53
BRWD1-201ENST00000333229 ZNF326Q5BKZ1 582 aaKnown RBP18.37■□□□□ 0.53
BRWD1-201ENST00000333229 TRIM44Q96DX7 344 aaPredicted RBP18.36■□□□□ 0.53
BRWD1-201ENST00000333229 FAM50AQ14320 339 aaKnown RBP18.34■□□□□ 0.53
BRWD1-201ENST00000333229 TRIM52Q96A61 297 aa18.32■□□□□ 0.52
BRWD1-201ENST00000333229 NPM2Q86SE8 214 aaKnown RBP18.31■□□□□ 0.52
BRWD1-201ENST00000333229 NEUROD1Q13562 356 aa18.26■□□□□ 0.51
BRWD1-201ENST00000333229 NCLP19338 710 aaKnown RBP18.24■□□□□ 0.51
BRWD1-201ENST00000333229 UPF2Q9HAU5 1272 aaKnown RBP18.24■□□□□ 0.51
BRWD1-201ENST00000333229 NBR1Q14596 966 aa18.24■□□□□ 0.51
BRWD1-201ENST00000333229 ANP32CO43423 234 aa18.17■□□□□ 0.5
BRWD1-201ENST00000333229 ACIN1Q9UKV3 1341 aaKnown RBP18.15■□□□□ 0.5
BRWD1-201ENST00000333229 LOC105371045A0A1W2PR82 267 aa18.15■□□□□ 0.5
BRWD1-201ENST00000333229 ARXQ96QS3 562 aa18.11■□□□□ 0.49
BRWD1-201ENST00000333229 NEFMP07197 916 aa18.11■□□□□ 0.49
BRWD1-201ENST00000333229 ANP32EQ9BTT0 268 aa18.05■□□□□ 0.48
BRWD1-201ENST00000333229 ERICH6BQ5W0A0 696 aa18.05■□□□□ 0.48
BRWD1-201ENST00000333229 NAP1L5Q96NT1 182 aaPredicted RBP18.02■□□□□ 0.48
BRWD1-201ENST00000333229 PLPPR3Q6T4P5 718 aa17.98■□□□□ 0.47
BRWD1-201ENST00000333229 AMER1Q5JTC6 1135 aaPredicted RBP17.97■□□□□ 0.47
BRWD1-201ENST00000333229 FBLN2P98095 1184 aa17.93■□□□□ 0.46
BRWD1-201ENST00000333229 DNTTIP2Q5QJE6 756 aaKnown RBP17.92■□□□□ 0.46
BRWD1-201ENST00000333229 ARID3CA6NKF2 412 aa17.89■□□□□ 0.45
BRWD1-201ENST00000333229 PTMAP06454 111 aaKnown RBP17.87■□□□□ 0.45
BRWD1-201ENST00000333229 CALRP27797 417 aaKnown RBP17.85■□□□□ 0.45
BRWD1-201ENST00000333229 FKBP8Q14318 412 aa17.83■□□□□ 0.45
BRWD1-201ENST00000333229 DDRGK1Q96HY6 314 aa17.82■□□□□ 0.44
BRWD1-201ENST00000333229 GOLGA6L22H0YM25 854 aa17.82■□□□□ 0.44
BRWD1-201ENST00000333229 A0A0G2JS52 829 aa17.8■□□□□ 0.44
BRWD1-201ENST00000333229 BECN1Q14457 450 aa17.8■□□□□ 0.44
BRWD1-201ENST00000333229 ESF1Q9H501 851 aaKnown RBP17.77■□□□□ 0.44
BRWD1-201ENST00000333229 TNNT3P45378 269 aaPredicted RBP17.77■□□□□ 0.43
BRWD1-201ENST00000333229 CHAF1AQ13111 956 aaPredicted RBP17.74■□□□□ 0.43
BRWD1-201ENST00000333229 RTN4Q9NQC3 1192 aaKnown RBP17.73■□□□□ 0.43
BRWD1-201ENST00000333229 STAG3Q9UJ98 1225 aa17.72■□□□□ 0.43
BRWD1-201ENST00000333229 ZRSR1Q15695 479 aaKnown RBP17.7■□□□□ 0.42
BRWD1-201ENST00000333229 SCAF1Q9H7N4 1312 aaKnown RBP17.7■□□□□ 0.42
BRWD1-201ENST00000333229 GOLGA6L6A8MZA4 724 aa17.7■□□□□ 0.42
BRWD1-201ENST00000333229 ZNF777Q9ULD5 760 aaPredicted RBP17.69■□□□□ 0.42
BRWD1-201ENST00000333229 CCDC136Q96JN2 1154 aa17.69■□□□□ 0.42
BRWD1-201ENST00000333229 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.69■□□□□ 0.42
BRWD1-201ENST00000333229 CHGAP10645 457 aaKnown RBP17.68■□□□□ 0.42
BRWD1-201ENST00000333229 PTMSP20962 102 aa17.64■□□□□ 0.41
BRWD1-201ENST00000333229 P3H3Q8IVL6 736 aa17.61■□□□□ 0.41
BRWD1-201ENST00000333229 TULP1O00294 542 aaPredicted RBP17.61■□□□□ 0.41
BRWD1-201ENST00000333229 PLEKHG5O94827 1062 aa17.6■□□□□ 0.41
BRWD1-201ENST00000333229 SALL2Q9Y467 1007 aaPredicted RBP17.6■□□□□ 0.41
BRWD1-201ENST00000333229 NRDCO43847 1150 aa17.59■□□□□ 0.41
BRWD1-201ENST00000333229 PPM1GO15355 546 aaPredicted RBP17.58■□□□□ 0.4
BRWD1-201ENST00000333229 PABPN1Q86U42 306 aaKnown RBP eCLIP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms