RNA–Protein interactions for RNA: ENST00000610481.1

MALAT1-204, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 353 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-204ENST00000610481 NISCHQ9Y2I1 1504 aa26.78■■□□□ 1.88
MALAT1-204ENST00000610481 CCDC180Q9P1Z9 1646 aa23.77■■□□□ 1.4
MALAT1-204ENST00000610481 ABCC9O60706 1549 aa23.56■■□□□ 1.36
MALAT1-204ENST00000610481 DCAF8L2P0C7V8 631 aa22.54■■□□□ 1.2
MALAT1-204ENST00000610481 RB1CC1Q8TDY2 1594 aa22.51■■□□□ 1.19
MALAT1-204ENST00000610481 NACADO15069 1562 aa22.45■■□□□ 1.18
MALAT1-204ENST00000610481 ZCCHC6Q5VYS8 1495 aaKnown RBP22.28■■□□□ 1.16
MALAT1-204ENST00000610481 MYO15BQ96JP2 1530 aa22.26■■□□□ 1.15
MALAT1-204ENST00000610481 DCAF1Q9Y4B6 1507 aa22.11■■□□□ 1.13
MALAT1-204ENST00000610481 PABPN1Q86U42 306 aaKnown RBP eCLIP22.05■■□□□ 1.12
MALAT1-204ENST00000610481 UNC13AQ9UPW8 1703 aa21.88■■□□□ 1.09
MALAT1-204ENST00000610481 BICRAQ9NZM4 1560 aa21.85■■□□□ 1.09
MALAT1-204ENST00000610481 DNAJC5BQ9UF47 199 aa21.82■■□□□ 1.08
MALAT1-204ENST00000610481 SCRIBQ14160 1630 aa21.77■■□□□ 1.07
MALAT1-204ENST00000610481 SHROOM4Q9ULL8 1493 aa21.58■■□□□ 1.05
MALAT1-204ENST00000610481 EIF4G1Q04637 1599 aaKnown RBP21.3■■□□□ 1
MALAT1-204ENST00000610481 CC2D2AQ9P2K1 1620 aa21.24■□□□□ 0.99
MALAT1-204ENST00000610481 CECR2Q9BXF3 1484 aa21.18■□□□□ 0.98
MALAT1-204ENST00000610481 SMARCA4P51532 1647 aa20.78■□□□□ 0.92
MALAT1-204ENST00000610481 NCAPD3P42695 1498 aa20.77■□□□□ 0.92
MALAT1-204ENST00000610481 ATAD2BQ9ULI0 1458 aa20.77■□□□□ 0.92
MALAT1-204ENST00000610481 BAZ1AQ9NRL2 1556 aaPredicted RBP20.74■□□□□ 0.91
MALAT1-204ENST00000610481 SMARCA2P51531 1590 aa20.68■□□□□ 0.9
MALAT1-204ENST00000610481 MROH2BQ7Z745 1585 aa20.65■□□□□ 0.9
MALAT1-204ENST00000610481 HMGXB3Q12766 1538 aa20.61■□□□□ 0.89
MALAT1-204ENST00000610481 BAZ1BQ9UIG0 1483 aaKnown RBP20.57■□□□□ 0.88
MALAT1-204ENST00000610481 PEG3Q9GZU2 1588 aa20.57■□□□□ 0.88
MALAT1-204ENST00000610481 RSF1Q96T23 1441 aaPredicted RBP20.39■□□□□ 0.85
MALAT1-204ENST00000610481 WIZO95785 1651 aa20.37■□□□□ 0.85
MALAT1-204ENST00000610481 NESP48681 1621 aa20.34■□□□□ 0.85
MALAT1-204ENST00000610481 ERCC6Q03468 1493 aa20.31■□□□□ 0.84
MALAT1-204ENST00000610481 LAMC3Q9Y6N6 1575 aa20.18■□□□□ 0.82
MALAT1-204ENST00000610481 CADPSQ9ULU8 1353 aa20.18■□□□□ 0.82
MALAT1-204ENST00000610481 TOP2AP11388 1531 aaKnown RBP20.17■□□□□ 0.82
MALAT1-204ENST00000610481 CUX2O14529 1486 aa20.12■□□□□ 0.81
MALAT1-204ENST00000610481 PDS5BQ9NTI5 1447 aa20.12■□□□□ 0.81
MALAT1-204ENST00000610481 CFTRP13569 1480 aa20■□□□□ 0.79
MALAT1-204ENST00000610481 THOC2Q8NI27 1593 aaKnown RBP20■□□□□ 0.79
MALAT1-204ENST00000610481 CCDC88BA6NC98 1476 aa19.98■□□□□ 0.79
MALAT1-204ENST00000610481 KIF21AQ7Z4S6 1674 aa19.97■□□□□ 0.79
MALAT1-204ENST00000610481 FANCD2Q9BXW9 1451 aa19.93■□□□□ 0.78
MALAT1-204ENST00000610481 MRC2Q9UBG0 1479 aa19.92■□□□□ 0.78
MALAT1-204ENST00000610481 CEP164Q9UPV0 1460 aa19.91■□□□□ 0.78
MALAT1-204ENST00000610481 WDR62O43379 1518 aa19.83■□□□□ 0.77
MALAT1-204ENST00000610481 SUPT5HO00267 1087 aaKnown RBP19.81■□□□□ 0.76
MALAT1-204ENST00000610481 DNAJC5Q9H3Z4 198 aa19.74■□□□□ 0.75
MALAT1-204ENST00000610481 URB2Q14146 1524 aaKnown RBP19.74■□□□□ 0.75
MALAT1-204ENST00000610481 PRDM2Q13029 1718 aa19.64■□□□□ 0.73
MALAT1-204ENST00000610481 TOPBP1Q92547 1522 aa19.58■□□□□ 0.73
MALAT1-204ENST00000610481 ABCC8Q09428 1581 aa19.54■□□□□ 0.72
MALAT1-204ENST00000610481 DNMBPQ6XZF7 1577 aa19.51■□□□□ 0.71
MALAT1-204ENST00000610481 IFT140Q96RY7 1462 aa19.5■□□□□ 0.71
MALAT1-204ENST00000610481 ZNF608Q9ULD9 1512 aaPredicted RBP19.46■□□□□ 0.71
MALAT1-204ENST00000610481 POLA1P09884 1462 aaPredicted RBP19.41■□□□□ 0.7
MALAT1-204ENST00000610481 CUX1P39880 1505 aa19.38■□□□□ 0.69
MALAT1-204ENST00000610481 RAD54L2Q9Y4B4 1467 aa19.36■□□□□ 0.69
MALAT1-204ENST00000610481 SOGA1O94964 1423 aa19.35■□□□□ 0.69
MALAT1-204ENST00000610481 FGD5Q6ZNL6 1462 aa19.35■□□□□ 0.69
MALAT1-204ENST00000610481 TARBP1Q13395 1621 aaKnown RBP19.34■□□□□ 0.69
MALAT1-204ENST00000610481 AQRO60306 1485 aaKnown RBP eCLIP19.34■□□□□ 0.69
MALAT1-204ENST00000610481 OSCARQ8IYS5 282 aa19.31■□□□□ 0.68
MALAT1-204ENST00000610481 EIF4G3O43432 1585 aaKnown RBP19.3■□□□□ 0.68
MALAT1-204ENST00000610481 TDRD9Q8NDG6 1382 aaKnown RBP19.29■□□□□ 0.68
MALAT1-204ENST00000610481 WRNQ14191 1432 aaPredicted RBP eCLIP19.22■□□□□ 0.67
MALAT1-204ENST00000610481 FBLN2P98095 1184 aa19.17■□□□□ 0.66
MALAT1-204ENST00000610481 SYNJ1O43426 1573 aa19.15■□□□□ 0.66
MALAT1-204ENST00000610481 SNAPC4Q5SXM2 1469 aa19.14■□□□□ 0.65
MALAT1-204ENST00000610481 ABCA10Q8WWZ4 1543 aa19.14■□□□□ 0.65
MALAT1-204ENST00000610481 WDR97A6NE52 1622 aa19.14■□□□□ 0.65
MALAT1-204ENST00000610481 TOP2BQ02880 1626 aa19.13■□□□□ 0.65
MALAT1-204ENST00000610481 GRIN2BQ13224 1484 aa19.12■□□□□ 0.65
MALAT1-204ENST00000610481 GAPVD1Q14C86 1478 aa19.11■□□□□ 0.65
MALAT1-204ENST00000610481 BIVM-ERCC5R4GMW8 1640 aa19.09■□□□□ 0.65
MALAT1-204ENST00000610481 CHMP7Q8WUX9 453 aaPredicted RBP19.07■□□□□ 0.64
MALAT1-204ENST00000610481 TRIM41Q8WV44 630 aa19.07■□□□□ 0.64
MALAT1-204ENST00000610481 MAGI1Q96QZ7 1491 aaPredicted RBP19.07■□□□□ 0.64
MALAT1-204ENST00000610481 ABCA5Q8WWZ7 1642 aa19.03■□□□□ 0.64
MALAT1-204ENST00000610481 CHD1O14646 1710 aa19.03■□□□□ 0.64
MALAT1-204ENST00000610481 SYNJ2O15056 1496 aa19.02■□□□□ 0.63
MALAT1-204ENST00000610481 ARHGEF11O15085 1522 aa18.96■□□□□ 0.63
MALAT1-204ENST00000610481 PBRM1Q86U86 1689 aa18.96■□□□□ 0.63
MALAT1-204ENST00000610481 RIMBP3CA6NJZ7 1639 aa18.94■□□□□ 0.62
MALAT1-204ENST00000610481 RIMBP3BA6NNM3 1639 aa18.94■□□□□ 0.62
MALAT1-204ENST00000610481 RIMBP3Q9UFD9 1639 aa18.94■□□□□ 0.62
MALAT1-204ENST00000610481 CLASP1Q7Z460 1538 aa18.9■□□□□ 0.62
MALAT1-204ENST00000610481 FHAD1B1AJZ9 1412 aa18.89■□□□□ 0.61
MALAT1-204ENST00000610481 GRIN2AQ12879 1464 aa18.88■□□□□ 0.61
MALAT1-204ENST00000610481 ERICH3Q5RHP9 1530 aa18.88■□□□□ 0.61
MALAT1-204ENST00000610481 ADAMTS12P58397 1594 aa18.88■□□□□ 0.61
MALAT1-204ENST00000610481 CYB5RLQ6IPT4 315 aa18.86■□□□□ 0.61
MALAT1-204ENST00000610481 KIF27Q86VH2 1401 aa18.83■□□□□ 0.6
MALAT1-204ENST00000610481 ARAP1Q96P48 1450 aa18.82■□□□□ 0.6
MALAT1-204ENST00000610481 NUP160Q12769 1436 aa18.81■□□□□ 0.6
MALAT1-204ENST00000610481 IGF1RP08069 1367 aa18.8■□□□□ 0.6
MALAT1-204ENST00000610481 CEP170Q5SW79 1584 aa18.77■□□□□ 0.6
MALAT1-204ENST00000610481 CARMIL1Q5VZK9 1371 aa18.68■□□□□ 0.58
MALAT1-204ENST00000610481 ERCC6L2Q5T890 1561 aa18.65■□□□□ 0.58
MALAT1-204ENST00000610481 JPH4Q96JJ6 628 aa18.64■□□□□ 0.57
MALAT1-204ENST00000610481 RUSC2Q8N2Y8 1516 aa18.63■□□□□ 0.57
MALAT1-204ENST00000610481 CUL7Q14999 1698 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms