RNA–Protein interactions for RNA: ENST00000575069.5

P4HB-220, Transcript of prolyl 4-hydroxylase subunit beta, humanhuman

TSL 2

Gene P4HB, Length 2,453 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
P4HB-220ENST00000575069 NISCHQ9Y2I1 1504 aa33.9■■■■□ 3.02
P4HB-220ENST00000575069 CCDC180Q9P1Z9 1646 aa29.45■■■□□ 2.3
P4HB-220ENST00000575069 ZCCHC6Q5VYS8 1495 aaKnown RBP28.46■■■□□ 2.15
P4HB-220ENST00000575069 DCAF8L2P0C7V8 631 aa28.16■■■□□ 2.1
P4HB-220ENST00000575069 ABCC9O60706 1549 aa27.97■■■□□ 2.07
P4HB-220ENST00000575069 DCAF1Q9Y4B6 1507 aa27.94■■■□□ 2.06
P4HB-220ENST00000575069 SHROOM4Q9ULL8 1493 aa27.84■■■□□ 2.05
P4HB-220ENST00000575069 MYO15BQ96JP2 1530 aa27.58■■■□□ 2.01
P4HB-220ENST00000575069 NACADO15069 1562 aa27.45■■□□□ 1.98
P4HB-220ENST00000575069 RB1CC1Q8TDY2 1594 aa27.22■■□□□ 1.95
P4HB-220ENST00000575069 SCRIBQ14160 1630 aa27.21■■□□□ 1.95
P4HB-220ENST00000575069 SUPT5HO00267 1087 aaKnown RBP26.81■■□□□ 1.88
P4HB-220ENST00000575069 UNC13AQ9UPW8 1703 aa26.73■■□□□ 1.87
P4HB-220ENST00000575069 PABPN1Q86U42 306 aaKnown RBP eCLIP26.46■■□□□ 1.83
P4HB-220ENST00000575069 BICRAQ9NZM4 1560 aa26.45■■□□□ 1.83
P4HB-220ENST00000575069 CECR2Q9BXF3 1484 aa26.42■■□□□ 1.82
P4HB-220ENST00000575069 RSF1Q96T23 1441 aaPredicted RBP26.35■■□□□ 1.81
P4HB-220ENST00000575069 MROH2BQ7Z745 1585 aa26.24■■□□□ 1.79
P4HB-220ENST00000575069 BAZ1AQ9NRL2 1556 aaPredicted RBP26.14■■□□□ 1.78
P4HB-220ENST00000575069 SMARCA4P51532 1647 aa26.04■■□□□ 1.76
P4HB-220ENST00000575069 WIZO95785 1651 aa26.03■■□□□ 1.76
P4HB-220ENST00000575069 TOP2AP11388 1531 aaKnown RBP25.69■■□□□ 1.7
P4HB-220ENST00000575069 PEG3Q9GZU2 1588 aa25.67■■□□□ 1.7
P4HB-220ENST00000575069 CHIC1Q5VXU3 224 aa25.65■■□□□ 1.7
P4HB-220ENST00000575069 EIF4G1Q04637 1599 aaKnown RBP25.63■■□□□ 1.69
P4HB-220ENST00000575069 ATAD2BQ9ULI0 1458 aa25.62■■□□□ 1.69
P4HB-220ENST00000575069 SMARCA2P51531 1590 aa25.56■■□□□ 1.68
P4HB-220ENST00000575069 CCDC88BA6NC98 1476 aa25.5■■□□□ 1.67
P4HB-220ENST00000575069 BAZ1BQ9UIG0 1483 aaKnown RBP25.47■■□□□ 1.67
P4HB-220ENST00000575069 NCAPD3P42695 1498 aa25.37■■□□□ 1.65
P4HB-220ENST00000575069 HMGXB3Q12766 1538 aa25.3■■□□□ 1.64
P4HB-220ENST00000575069 CC2D2AQ9P2K1 1620 aa25.27■■□□□ 1.64
P4HB-220ENST00000575069 TRIM41Q8WV44 630 aa25.15■■□□□ 1.62
P4HB-220ENST00000575069 ABCC8Q09428 1581 aa25■■□□□ 1.59
P4HB-220ENST00000575069 CFTRP13569 1480 aa24.83■■□□□ 1.57
P4HB-220ENST00000575069 WRNQ14191 1432 aaPredicted RBP eCLIP24.78■■□□□ 1.56
P4HB-220ENST00000575069 DNAJC5BQ9UF47 199 aa24.78■■□□□ 1.56
P4HB-220ENST00000575069 FAM9AQ8IZU1 332 aaPredicted RBP24.77■■□□□ 1.56
P4HB-220ENST00000575069 CADPSQ9ULU8 1353 aa24.75■■□□□ 1.55
P4HB-220ENST00000575069 LOC105371045A0A1W2PR82 267 aa24.75■■□□□ 1.55
P4HB-220ENST00000575069 SYNJ1O43426 1573 aa24.69■■□□□ 1.54
P4HB-220ENST00000575069 PRDM2Q13029 1718 aa24.65■■□□□ 1.54
P4HB-220ENST00000575069 NESP48681 1621 aa24.59■■□□□ 1.53
P4HB-220ENST00000575069 SOGA1O94964 1423 aa24.55■■□□□ 1.52
P4HB-220ENST00000575069 TOP2BQ02880 1626 aa24.55■■□□□ 1.52
P4HB-220ENST00000575069 CUX1P39880 1505 aa24.51■■□□□ 1.51
P4HB-220ENST00000575069 BIVM-ERCC5R4GMW8 1640 aa24.5■■□□□ 1.51
P4HB-220ENST00000575069 RUSC2Q8N2Y8 1516 aa24.49■■□□□ 1.51
P4HB-220ENST00000575069 EHMT2Q96KQ7 1210 aa24.49■■□□□ 1.51
P4HB-220ENST00000575069 FANCD2Q9BXW9 1451 aa24.48■■□□□ 1.51
P4HB-220ENST00000575069 LAMC3Q9Y6N6 1575 aa24.47■■□□□ 1.51
P4HB-220ENST00000575069 EEA1Q15075 1411 aa24.38■■□□□ 1.49
P4HB-220ENST00000575069 CSRNP3Q8WYN3 585 aa24.37■■□□□ 1.49
P4HB-220ENST00000575069 PDS5BQ9NTI5 1447 aa24.31■■□□□ 1.48
P4HB-220ENST00000575069 CEP164Q9UPV0 1460 aa24.3■■□□□ 1.48
P4HB-220ENST00000575069 FGD5Q6ZNL6 1462 aa24.23■■□□□ 1.47
P4HB-220ENST00000575069 KIF21AQ7Z4S6 1674 aa24.23■■□□□ 1.47
P4HB-220ENST00000575069 DNMBPQ6XZF7 1577 aa24.23■■□□□ 1.47
P4HB-220ENST00000575069 TOPBP1Q92547 1522 aa24.22■■□□□ 1.47
P4HB-220ENST00000575069 URB2Q14146 1524 aaKnown RBP24.19■■□□□ 1.46
P4HB-220ENST00000575069 KIF27Q86VH2 1401 aa24.14■■□□□ 1.45
P4HB-220ENST00000575069 POLA1P09884 1462 aaPredicted RBP24.11■■□□□ 1.45
P4HB-220ENST00000575069 CUX2O14529 1486 aa24.1■■□□□ 1.45
P4HB-220ENST00000575069 GOLGA3Q08378 1498 aa24.1■■□□□ 1.45
P4HB-220ENST00000575069 UBTFP17480 764 aaKnown RBP24.09■■□□□ 1.45
P4HB-220ENST00000575069 RAD54L2Q9Y4B4 1467 aa24.09■■□□□ 1.45
P4HB-220ENST00000575069 KIF21BO75037 1637 aa24.08■■□□□ 1.45
P4HB-220ENST00000575069 TNIKQ9UKE5 1360 aa24.05■■□□□ 1.44
P4HB-220ENST00000575069 RAPGEF2Q9Y4G8 1499 aa24.02■■□□□ 1.44
P4HB-220ENST00000575069 PRXQ9BXM0 1461 aa23.99■■□□□ 1.43
P4HB-220ENST00000575069 ABCA10Q8WWZ4 1543 aa23.99■■□□□ 1.43
P4HB-220ENST00000575069 MRC2Q9UBG0 1479 aa23.99■■□□□ 1.43
P4HB-220ENST00000575069 IGF1RP08069 1367 aa23.98■■□□□ 1.43
P4HB-220ENST00000575069 CEP162Q5TB80 1403 aa23.94■■□□□ 1.42
P4HB-220ENST00000575069 ERCC6Q03468 1493 aa23.93■■□□□ 1.42
P4HB-220ENST00000575069 ERICH3Q5RHP9 1530 aa23.9■■□□□ 1.42
P4HB-220ENST00000575069 WDR97A6NE52 1622 aa23.88■■□□□ 1.41
P4HB-220ENST00000575069 TDRD9Q8NDG6 1382 aaKnown RBP23.86■■□□□ 1.41
P4HB-220ENST00000575069 WDR62O43379 1518 aa23.85■■□□□ 1.41
P4HB-220ENST00000575069 CARMIL1Q5VZK9 1371 aa23.84■■□□□ 1.41
P4HB-220ENST00000575069 TARBP1Q13395 1621 aaKnown RBP23.84■■□□□ 1.41
P4HB-220ENST00000575069 THOC2Q8NI27 1593 aaKnown RBP23.78■■□□□ 1.4
P4HB-220ENST00000575069 ABCA5Q8WWZ7 1642 aa23.78■■□□□ 1.4
P4HB-220ENST00000575069 RANGAP1P46060 587 aaPredicted RBP23.77■■□□□ 1.4
P4HB-220ENST00000575069 GAPVD1Q14C86 1478 aa23.77■■□□□ 1.4
P4HB-220ENST00000575069 CLIP1P30622 1438 aa23.75■■□□□ 1.39
P4HB-220ENST00000575069 IFT140Q96RY7 1462 aa23.7■■□□□ 1.38
P4HB-220ENST00000575069 AQRO60306 1485 aaKnown RBP eCLIP23.69■■□□□ 1.382e-7■■■■□ 21.8
P4HB-220ENST00000575069 CUL7Q14999 1698 aa23.68■■□□□ 1.38
P4HB-220ENST00000575069 ZNF608Q9ULD9 1512 aaPredicted RBP23.65■■□□□ 1.38
P4HB-220ENST00000575069 PPARGC1BQ86YN6 1023 aaKnown RBP23.62■■□□□ 1.37
P4HB-220ENST00000575069 PCGF6Q9BYE7 350 aa23.62■■□□□ 1.37
P4HB-220ENST00000575069 PBRM1Q86U86 1689 aa23.6■■□□□ 1.37
P4HB-220ENST00000575069 GRIN2BQ13224 1484 aa23.55■■□□□ 1.36
P4HB-220ENST00000575069 TRIM26Q12899 539 aaPredicted RBP23.54■■□□□ 1.36
P4HB-220ENST00000575069 VPS8Q8N3P4 1428 aa23.52■■□□□ 1.36
P4HB-220ENST00000575069 ARAP1Q96P48 1450 aa23.51■■□□□ 1.35
P4HB-220ENST00000575069 EIF4G3O43432 1585 aaKnown RBP23.5■■□□□ 1.35
P4HB-220ENST00000575069 ARHGAP35Q9NRY4 1499 aa23.5■■□□□ 1.35
P4HB-220ENST00000575069 FHAD1B1AJZ9 1412 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms