RNA–Protein interactions for RNA: ENST00000626874.2

CHD2-208, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 7,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-208ENST00000626874 DCAF8L2P0C7V8 631 aa11.66□□□□□ -0.54
CHD2-208ENST00000626874 FAM9AQ8IZU1 332 aaPredicted RBP11.28□□□□□ -0.6
CHD2-208ENST00000626874 PELP1Q8IZL8 1130 aaKnown RBP11.17□□□□□ -0.62
CHD2-208ENST00000626874 APLP2Q06481 763 aa10.93□□□□□ -0.66
CHD2-208ENST00000626874 NISCHQ9Y2I1 1504 aa10.74□□□□□ -0.69
CHD2-208ENST00000626874 SUPT5HO00267 1087 aaKnown RBP10.73□□□□□ -0.69
CHD2-208ENST00000626874 CCER1Q8TC90 406 aaPredicted RBP10.67□□□□□ -0.7
CHD2-208ENST00000626874 ERICH6Q7L0X2 663 aa10.48□□□□□ -0.73
CHD2-208ENST00000626874 SHROOM4Q9ULL8 1493 aa10.39□□□□□ -0.75
CHD2-208ENST00000626874 EHMT2Q96KQ7 1210 aa10.36□□□□□ -0.75
CHD2-208ENST00000626874 ATP1B4Q9UN42 357 aaPredicted RBP10.33□□□□□ -0.76
CHD2-208ENST00000626874 CENPBP07199 599 aaPredicted RBP10.3□□□□□ -0.76
CHD2-208ENST00000626874 ZEB1P37275 1124 aaPredicted RBP10.29□□□□□ -0.76
CHD2-208ENST00000626874 NEFLP07196 543 aa10.29□□□□□ -0.76
CHD2-208ENST00000626874 MYT1LQ9UL68 1186 aa10.24□□□□□ -0.77
CHD2-208ENST00000626874 YTHDC1Q96MU7 727 aaKnown RBP10.2□□□□□ -0.78
CHD2-208ENST00000626874 DAXXQ9UER7 740 aaPredicted RBP10.18□□□□□ -0.78
CHD2-208ENST00000626874 UBTFP17480 764 aaKnown RBP10.15□□□□□ -0.78
CHD2-208ENST00000626874 TRIM41Q8WV44 630 aa10.13□□□□□ -0.79
CHD2-208ENST00000626874 RANGAP1P46060 587 aaPredicted RBP10.1□□□□□ -0.79
CHD2-208ENST00000626874 PCGF6Q9BYE7 350 aa10.08□□□□□ -0.8
CHD2-208ENST00000626874 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.06□□□□□ -0.8
CHD2-208ENST00000626874 HNRNPUL2Q1KMD3 747 aaKnown RBP10.06□□□□□ -0.8
CHD2-208ENST00000626874 MYT1Q01538 1121 aa10.05□□□□□ -0.8
CHD2-208ENST00000626874 TTBK1Q5TCY1 1321 aaPredicted RBP10.05□□□□□ -0.8
CHD2-208ENST00000626874 SLC4A1APQ9BWU0 796 aaKnown RBP9.92□□□□□ -0.82
CHD2-208ENST00000626874 ZBTB47Q9UFB7 747 aaPredicted RBP9.88□□□□□ -0.83
CHD2-208ENST00000626874 POLR3GLQ9BT43 218 aa9.85□□□□□ -0.83
CHD2-208ENST00000626874 ZNF316A6NFI3 1004 aaPredicted RBP9.84□□□□□ -0.83
CHD2-208ENST00000626874 NEFMP07197 916 aa9.84□□□□□ -0.83
CHD2-208ENST00000626874 CLSPNQ9HAW4 1339 aa9.82□□□□□ -0.84
CHD2-208ENST00000626874 CHIC1Q5VXU3 224 aa9.82□□□□□ -0.84
CHD2-208ENST00000626874 RTL5Q5HYW3 569 aaPredicted RBP9.72□□□□□ -0.85
CHD2-208ENST00000626874 ESF1Q9H501 851 aaKnown RBP9.72□□□□□ -0.85
CHD2-208ENST00000626874 ITGAEP38570 1179 aa9.7□□□□□ -0.86
CHD2-208ENST00000626874 BCANQ96GW7 911 aa9.69□□□□□ -0.86
CHD2-208ENST00000626874 TRIM26Q12899 539 aaPredicted RBP9.65□□□□□ -0.86
CHD2-208ENST00000626874 SLC24A1O60721 1099 aa9.65□□□□□ -0.87
CHD2-208ENST00000626874 TRIM52Q96A61 297 aa9.61□□□□□ -0.87
CHD2-208ENST00000626874 CANXP27824 592 aaKnown RBP9.58□□□□□ -0.88
CHD2-208ENST00000626874 CDK11AQ9UQ88 783 aaPredicted RBP9.58□□□□□ -0.88
CHD2-208ENST00000626874 FAM50AQ14320 339 aaKnown RBP9.57□□□□□ -0.88
CHD2-208ENST00000626874 NPM1P06748 294 aaKnown RBP eCLIP9.57□□□□□ -0.88
CHD2-208ENST00000626874 FBLN2P98095 1184 aa9.54□□□□□ -0.88
CHD2-208ENST00000626874 STAG3Q9UJ98 1225 aa9.52□□□□□ -0.88
CHD2-208ENST00000626874 CNGB1Q14028 1251 aaPredicted RBP9.52□□□□□ -0.89
CHD2-208ENST00000626874 ANP32BQ92688 251 aaKnown RBP9.5□□□□□ -0.89
CHD2-208ENST00000626874 CDK11BP21127 795 aaKnown RBP9.49□□□□□ -0.89
CHD2-208ENST00000626874 ANP32CO43423 234 aa9.48□□□□□ -0.89
CHD2-208ENST00000626874 NPM2Q86SE8 214 aaKnown RBP9.47□□□□□ -0.89
CHD2-208ENST00000626874 ZNF326Q5BKZ1 582 aaKnown RBP9.42□□□□□ -0.9
CHD2-208ENST00000626874 PPARGC1BQ86YN6 1023 aaKnown RBP9.42□□□□□ -0.9
CHD2-208ENST00000626874 UPF2Q9HAU5 1272 aaKnown RBP9.41□□□□□ -0.9
CHD2-208ENST00000626874 HSP90AA1P07900 732 aaKnown RBP9.38□□□□□ -0.91
CHD2-208ENST00000626874 ACIN1Q9UKV3 1341 aaKnown RBP9.38□□□□□ -0.91
CHD2-208ENST00000626874 ABCC9O60706 1549 aa9.37□□□□□ -0.91
CHD2-208ENST00000626874 HRCP23327 699 aa9.36□□□□□ -0.91
CHD2-208ENST00000626874 NEUROD1Q13562 356 aa9.35□□□□□ -0.91
CHD2-208ENST00000626874 EIF5BO60841 1220 aaKnown RBP9.34□□□□□ -0.91
CHD2-208ENST00000626874 ANP32AP39687 249 aaKnown RBP9.33□□□□□ -0.92
CHD2-208ENST00000626874 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.31□□□□□ -0.92
CHD2-208ENST00000626874 PABPN1Q86U42 306 aaKnown RBP eCLIP9.31□□□□□ -0.92
CHD2-208ENST00000626874 DIEXFQ68CQ4 756 aaKnown RBP9.3□□□□□ -0.92
CHD2-208ENST00000626874 CHGAP10645 457 aaKnown RBP9.3□□□□□ -0.92
CHD2-208ENST00000626874 MYH16Q9H6N6 1097 aa9.3□□□□□ -0.92
CHD2-208ENST00000626874 BCL11AQ9H165 835 aa9.29□□□□□ -0.92
CHD2-208ENST00000626874 ZNF777Q9ULD5 760 aaPredicted RBP9.29□□□□□ -0.92
CHD2-208ENST00000626874 SCAF1Q9H7N4 1312 aaKnown RBP9.28□□□□□ -0.92
CHD2-208ENST00000626874 HAP1P54257 671 aaPredicted RBP9.26□□□□□ -0.93
CHD2-208ENST00000626874 C14orf37Q86TY3 774 aa9.24□□□□□ -0.93
CHD2-208ENST00000626874 A0A0G2JS52 829 aa9.24□□□□□ -0.93
CHD2-208ENST00000626874 PLPPR3Q6T4P5 718 aa9.23□□□□□ -0.93
CHD2-208ENST00000626874 TSPY4P0CV99 314 aa9.22□□□□□ -0.93
CHD2-208ENST00000626874 TSPY10P0CW01 314 aa9.22□□□□□ -0.93
CHD2-208ENST00000626874 PPP1R15AO75807 674 aaPredicted RBP9.22□□□□□ -0.93
CHD2-208ENST00000626874 TONSLQ96HA7 1378 aa9.21□□□□□ -0.94
CHD2-208ENST00000626874 WDR43Q15061 677 aaKnown RBP eCLIP9.2□□□□□ -0.941e-6■■□□□ 11.8
CHD2-208ENST00000626874 GLIPR1L2Q4G1C9 344 aa9.19□□□□□ -0.94
CHD2-208ENST00000626874 EIF4G2P78344 907 aaKnown RBP eCLIP9.19□□□□□ -0.94
CHD2-208ENST00000626874 ZRSR1Q15695 479 aaKnown RBP9.18□□□□□ -0.94
CHD2-208ENST00000626874 NCLP19338 710 aaKnown RBP9.17□□□□□ -0.94
CHD2-208ENST00000626874 ANP32EQ9BTT0 268 aa9.17□□□□□ -0.94
CHD2-208ENST00000626874 NPHP1O15259 732 aa9.16□□□□□ -0.94
CHD2-208ENST00000626874 CHMP7Q8WUX9 453 aaPredicted RBP9.15□□□□□ -0.94
CHD2-208ENST00000626874 CDCA8Q53HL2 280 aa9.15□□□□□ -0.94
CHD2-208ENST00000626874 CASC1Q6TDU7 716 aa9.15□□□□□ -0.95
CHD2-208ENST00000626874 HDGFP51858 240 aaKnown RBP9.13□□□□□ -0.95
CHD2-208ENST00000626874 ARID4BQ4LE39 1312 aaPredicted RBP9.13□□□□□ -0.95
CHD2-208ENST00000626874 CHMP4BQ9H444 224 aaKnown RBP9.13□□□□□ -0.95
CHD2-208ENST00000626874 LOC105371045A0A1W2PR82 267 aa9.13□□□□□ -0.95
CHD2-208ENST00000626874 TMC1Q8TDI8 760 aa9.12□□□□□ -0.95
CHD2-208ENST00000626874 CFAP53Q96M91 514 aa9.12□□□□□ -0.95
CHD2-208ENST00000626874 P3H3Q8IVL6 736 aa9.11□□□□□ -0.95
CHD2-208ENST00000626874 ARID3CA6NKF2 412 aa9.1□□□□□ -0.95
CHD2-208ENST00000626874 GOLGA6L22H0YM25 854 aa9.1□□□□□ -0.95
CHD2-208ENST00000626874 CSRNP3Q8WYN3 585 aa9.1□□□□□ -0.95
CHD2-208ENST00000626874 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.09□□□□□ -0.954e-7■■□□□ 13.6
CHD2-208ENST00000626874 PNNQ9H307 717 aaKnown RBP9.09□□□□□ -0.95
CHD2-208ENST00000626874 BECN1Q14457 450 aa9.08□□□□□ -0.96
CHD2-208ENST00000626874 RSF1Q96T23 1441 aaPredicted RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms