RNA–Protein interactions for RNA: ENST00000380800.7

BRWD1-204, Transcript of bromodomain and WD repeat domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene BRWD1, Length 7,605 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRWD1-204ENST00000380800 DCAF8L2P0C7V8 631 aa22.06■■□□□ 1.12
BRWD1-204ENST00000380800 SUPT5HO00267 1087 aaKnown RBP20.8■□□□□ 0.92
BRWD1-204ENST00000380800 EHMT2Q96KQ7 1210 aa20.65■□□□□ 0.9
BRWD1-204ENST00000380800 SHROOM4Q9ULL8 1493 aa20.42■□□□□ 0.86
BRWD1-204ENST00000380800 PELP1Q8IZL8 1130 aaKnown RBP20.19■□□□□ 0.82
BRWD1-204ENST00000380800 APLP2Q06481 763 aa19.96■□□□□ 0.79
BRWD1-204ENST00000380800 TTBK1Q5TCY1 1321 aaPredicted RBP19.93■□□□□ 0.78
BRWD1-204ENST00000380800 NISCHQ9Y2I1 1504 aa19.9■□□□□ 0.78
BRWD1-204ENST00000380800 FAM9AQ8IZU1 332 aaPredicted RBP19.76■□□□□ 0.75
BRWD1-204ENST00000380800 RANGAP1P46060 587 aaPredicted RBP19.65■□□□□ 0.74
BRWD1-204ENST00000380800 ERICH6Q7L0X2 663 aa19.59■□□□□ 0.73
BRWD1-204ENST00000380800 PCGF6Q9BYE7 350 aa19.58■□□□□ 0.73
BRWD1-204ENST00000380800 ATP1B4Q9UN42 357 aaPredicted RBP19.5■□□□□ 0.71
BRWD1-204ENST00000380800 CCER1Q8TC90 406 aaPredicted RBP19.32■□□□□ 0.68
BRWD1-204ENST00000380800 CENPBP07199 599 aaPredicted RBP19.3■□□□□ 0.68
BRWD1-204ENST00000380800 YTHDC1Q96MU7 727 aaKnown RBP19.16■□□□□ 0.66
BRWD1-204ENST00000380800 TRIM41Q8WV44 630 aa19.14■□□□□ 0.65
BRWD1-204ENST00000380800 UBTFP17480 764 aaKnown RBP19.1■□□□□ 0.65
BRWD1-204ENST00000380800 ZEB1P37275 1124 aaPredicted RBP19.07■□□□□ 0.64
BRWD1-204ENST00000380800 NEFLP07196 543 aa19.05■□□□□ 0.64
BRWD1-204ENST00000380800 PPARGC1BQ86YN6 1023 aaKnown RBP19■□□□□ 0.63
BRWD1-204ENST00000380800 MYT1Q01538 1121 aa18.83■□□□□ 0.6
BRWD1-204ENST00000380800 POLR3GLQ9BT43 218 aa18.8■□□□□ 0.6
BRWD1-204ENST00000380800 MYT1LQ9UL68 1186 aa18.8■□□□□ 0.6
BRWD1-204ENST00000380800 ITGAEP38570 1179 aa18.72■□□□□ 0.59
BRWD1-204ENST00000380800 CNGB1Q14028 1251 aaPredicted RBP18.71■□□□□ 0.59
BRWD1-204ENST00000380800 DAXXQ9UER7 740 aaPredicted RBP18.7■□□□□ 0.58
BRWD1-204ENST00000380800 CHIC1Q5VXU3 224 aa18.66■□□□□ 0.58
BRWD1-204ENST00000380800 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.65■□□□□ 0.58
BRWD1-204ENST00000380800 HNRNPUL2Q1KMD3 747 aaKnown RBP18.65■□□□□ 0.58
BRWD1-204ENST00000380800 SLC4A1APQ9BWU0 796 aaKnown RBP18.53■□□□□ 0.56
BRWD1-204ENST00000380800 TRIM26Q12899 539 aaPredicted RBP18.48■□□□□ 0.55
BRWD1-204ENST00000380800 HRCP23327 699 aa18.34■□□□□ 0.53
BRWD1-204ENST00000380800 LOC105371045A0A1W2PR82 267 aa18.32■□□□□ 0.52
BRWD1-204ENST00000380800 CLSPNQ9HAW4 1339 aa18.28■□□□□ 0.52
BRWD1-204ENST00000380800 ZNF316A6NFI3 1004 aaPredicted RBP18.27■□□□□ 0.52
BRWD1-204ENST00000380800 RTL5Q5HYW3 569 aaPredicted RBP18.13■□□□□ 0.49
BRWD1-204ENST00000380800 FAM50AQ14320 339 aaKnown RBP18.12■□□□□ 0.49
BRWD1-204ENST00000380800 DIEXFQ68CQ4 756 aaKnown RBP18.05■□□□□ 0.48
BRWD1-204ENST00000380800 TRIM52Q96A61 297 aa18.05■□□□□ 0.48
BRWD1-204ENST00000380800 NEUROD1Q13562 356 aa18.04■□□□□ 0.48
BRWD1-204ENST00000380800 BCL11AQ9H165 835 aa18.02■□□□□ 0.47
BRWD1-204ENST00000380800 SLC24A1O60721 1099 aa17.99■□□□□ 0.47
BRWD1-204ENST00000380800 BCANQ96GW7 911 aa17.99■□□□□ 0.47
BRWD1-204ENST00000380800 ZNF326Q5BKZ1 582 aaKnown RBP17.94■□□□□ 0.46
BRWD1-204ENST00000380800 ZBTB47Q9UFB7 747 aaPredicted RBP17.87■□□□□ 0.45
BRWD1-204ENST00000380800 ANP32CO43423 234 aa17.78■□□□□ 0.44
BRWD1-204ENST00000380800 CANXP27824 592 aaKnown RBP17.78■□□□□ 0.44
BRWD1-204ENST00000380800 FBLN2P98095 1184 aa17.77■□□□□ 0.44
BRWD1-204ENST00000380800 CDK11AQ9UQ88 783 aaPredicted RBP17.75■□□□□ 0.43
BRWD1-204ENST00000380800 PABPN1Q86U42 306 aaKnown RBP eCLIP17.74■□□□□ 0.43
BRWD1-204ENST00000380800 GTF3C3Q9Y5Q9 886 aa17.73■□□□□ 0.43
BRWD1-204ENST00000380800 ARID3CA6NKF2 412 aa17.67■□□□□ 0.42
BRWD1-204ENST00000380800 NEFMP07197 916 aa17.61■□□□□ 0.41
BRWD1-204ENST00000380800 P3H3Q8IVL6 736 aa17.58■□□□□ 0.41
BRWD1-204ENST00000380800 NPM2Q86SE8 214 aaKnown RBP17.57■□□□□ 0.4
BRWD1-204ENST00000380800 ABCC9O60706 1549 aa17.57■□□□□ 0.4
BRWD1-204ENST00000380800 PLPPR3Q6T4P5 718 aa17.53■□□□□ 0.4
BRWD1-204ENST00000380800 ZNF777Q9ULD5 760 aaPredicted RBP17.5■□□□□ 0.39
BRWD1-204ENST00000380800 ANP32AP39687 249 aaKnown RBP17.48■□□□□ 0.39
BRWD1-204ENST00000380800 HSP90AA1P07900 732 aaKnown RBP17.38■□□□□ 0.37
BRWD1-204ENST00000380800 CHGAP10645 457 aaKnown RBP17.38■□□□□ 0.37
BRWD1-204ENST00000380800 SALL2Q9Y467 1007 aaPredicted RBP17.35■□□□□ 0.37
BRWD1-204ENST00000380800 ESF1Q9H501 851 aaKnown RBP17.34■□□□□ 0.37
BRWD1-204ENST00000380800 STAG3Q9UJ98 1225 aa17.34■□□□□ 0.37
BRWD1-204ENST00000380800 EIF5BO60841 1220 aaKnown RBP17.32■□□□□ 0.36
BRWD1-204ENST00000380800 ANP32BQ92688 251 aaKnown RBP17.32■□□□□ 0.36
BRWD1-204ENST00000380800 FKBP8Q14318 412 aa17.29■□□□□ 0.36
BRWD1-204ENST00000380800 FAM9BQ8IZU0 186 aa17.26■□□□□ 0.35
BRWD1-204ENST00000380800 ACIN1Q9UKV3 1341 aaKnown RBP17.26■□□□□ 0.35
BRWD1-204ENST00000380800 ARXQ96QS3 562 aa17.24■□□□□ 0.35
BRWD1-204ENST00000380800 UPF2Q9HAU5 1272 aaKnown RBP17.22■□□□□ 0.35
BRWD1-204ENST00000380800 HNRNPUQ00839 825 aaKnown RBP eCLIP17.21■□□□□ 0.35
BRWD1-204ENST00000380800 SCAF1Q9H7N4 1312 aaKnown RBP17.19■□□□□ 0.34
BRWD1-204ENST00000380800 TONSLQ96HA7 1378 aa17.19■□□□□ 0.34
BRWD1-204ENST00000380800 NBR1Q14596 966 aa17.18■□□□□ 0.34
BRWD1-204ENST00000380800 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.18■□□□□ 0.342e-6■■□□□ 11.5
BRWD1-204ENST00000380800 DDX10Q13206 875 aaKnown RBP17.16■□□□□ 0.34
BRWD1-204ENST00000380800 SENP3Q9H4L4 574 aaPredicted RBP17.15■□□□□ 0.34
BRWD1-204ENST00000380800 A0A0G2JS52 829 aa17.13■□□□□ 0.33
BRWD1-204ENST00000380800 PLEKHG5O94827 1062 aa17.13■□□□□ 0.33
BRWD1-204ENST00000380800 CSRNP3Q8WYN3 585 aa17.11■□□□□ 0.33
BRWD1-204ENST00000380800 CHIC2Q9UKJ5 165 aa17.1■□□□□ 0.33
BRWD1-204ENST00000380800 TMC1Q8TDI8 760 aa17.09■□□□□ 0.33
BRWD1-204ENST00000380800 KDM2AQ9Y2K7 1162 aa17.08■□□□□ 0.33
BRWD1-204ENST00000380800 SCRIBQ14160 1630 aa17.08■□□□□ 0.33
BRWD1-204ENST00000380800 ZBTB7CA1YPR0 619 aa17.06■□□□□ 0.32
BRWD1-204ENST00000380800 CCDC136Q96JN2 1154 aa17.06■□□□□ 0.32
BRWD1-204ENST00000380800 WDR43Q15061 677 aaKnown RBP eCLIP17.06■□□□□ 0.32
BRWD1-204ENST00000380800 NPM1P06748 294 aaKnown RBP eCLIP17.04■□□□□ 0.32
BRWD1-204ENST00000380800 IRX6P78412 446 aaPredicted RBP17.03■□□□□ 0.32
BRWD1-204ENST00000380800 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.02■□□□□ 0.32
BRWD1-204ENST00000380800 HIRIP3Q9BW71 556 aaPredicted RBP16.98■□□□□ 0.31
BRWD1-204ENST00000380800 C14orf37Q86TY3 774 aa16.96■□□□□ 0.31
BRWD1-204ENST00000380800 MYH16Q9H6N6 1097 aa16.93■□□□□ 0.3
BRWD1-204ENST00000380800 CDK11BP21127 795 aaKnown RBP16.93■□□□□ 0.3
BRWD1-204ENST00000380800 MRS2Q9HD23 443 aa16.92■□□□□ 0.3
BRWD1-204ENST00000380800 GLIPR1L2Q4G1C9 344 aa16.92■□□□□ 0.3
BRWD1-204ENST00000380800 SENP3-EIF4A1A0A087X0R7 540 aa16.88■□□□□ 0.29
BRWD1-204ENST00000380800 TPRNQ4KMQ1 711 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms