RNA–Protein interactions for RNA: ENST00000591120.1

SAFB2-208, Transcript of scaffold attachment factor B2, humanhuman

TSL 2

Gene SAFB2, Length 1,298 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-208ENST00000591120 NISCHQ9Y2I1 1504 aa33.99■■■■□ 3.03
SAFB2-208ENST00000591120 ABCC9O60706 1549 aa30.49■■■□□ 2.47
SAFB2-208ENST00000591120 CCDC180Q9P1Z9 1646 aa30.34■■■□□ 2.45
SAFB2-208ENST00000591120 RB1CC1Q8TDY2 1594 aa28.97■■■□□ 2.23
SAFB2-208ENST00000591120 NACADO15069 1562 aa28.82■■■□□ 2.2
SAFB2-208ENST00000591120 DCAF8L2P0C7V8 631 aa28.8■■■□□ 2.2
SAFB2-208ENST00000591120 DNAJC5BQ9UF47 199 aa28.76■■■□□ 2.19
SAFB2-208ENST00000591120 PABPN1Q86U42 306 aaKnown RBP eCLIP28.5■■■□□ 2.15
SAFB2-208ENST00000591120 MYO15BQ96JP2 1530 aa28.48■■■□□ 2.15
SAFB2-208ENST00000591120 BICRAQ9NZM4 1560 aa28.14■■■□□ 2.1
SAFB2-208ENST00000591120 ZCCHC6Q5VYS8 1495 aaKnown RBP28.14■■■□□ 2.09
SAFB2-208ENST00000591120 UNC13AQ9UPW8 1703 aa28.1■■■□□ 2.09
SAFB2-208ENST00000591120 DCAF1Q9Y4B6 1507 aa28.09■■■□□ 2.09
SAFB2-208ENST00000591120 SHROOM4Q9ULL8 1493 aa27.81■■■□□ 2.04
SAFB2-208ENST00000591120 SCRIBQ14160 1630 aa27.67■■■□□ 2.02
SAFB2-208ENST00000591120 CECR2Q9BXF3 1484 aa27.5■■□□□ 1.99
SAFB2-208ENST00000591120 CC2D2AQ9P2K1 1620 aa27.48■■□□□ 1.99
SAFB2-208ENST00000591120 EIF4G1Q04637 1599 aaKnown RBP27.45■■□□□ 1.99
SAFB2-208ENST00000591120 NCAPD3P42695 1498 aa26.7■■□□□ 1.87
SAFB2-208ENST00000591120 ATAD2BQ9ULI0 1458 aa26.58■■□□□ 1.85
SAFB2-208ENST00000591120 DNAJC5Q9H3Z4 198 aa26.44■■□□□ 1.82
SAFB2-208ENST00000591120 SMARCA2P51531 1590 aa26.44■■□□□ 1.82
SAFB2-208ENST00000591120 SMARCA4P51532 1647 aa26.43■■□□□ 1.82
SAFB2-208ENST00000591120 HMGXB3Q12766 1538 aa26.38■■□□□ 1.81
SAFB2-208ENST00000591120 BAZ1AQ9NRL2 1556 aaPredicted RBP26.35■■□□□ 1.81
SAFB2-208ENST00000591120 ERCC6Q03468 1493 aa26.32■■□□□ 1.8
SAFB2-208ENST00000591120 CUX2O14529 1486 aa26.3■■□□□ 1.8
SAFB2-208ENST00000591120 BAZ1BQ9UIG0 1483 aaKnown RBP26.27■■□□□ 1.8
SAFB2-208ENST00000591120 PEG3Q9GZU2 1588 aa26.23■■□□□ 1.79
SAFB2-208ENST00000591120 NESP48681 1621 aa26.18■■□□□ 1.78
SAFB2-208ENST00000591120 MROH2BQ7Z745 1585 aa26.18■■□□□ 1.78
SAFB2-208ENST00000591120 LAMC3Q9Y6N6 1575 aa25.97■■□□□ 1.75
SAFB2-208ENST00000591120 PDS5BQ9NTI5 1447 aa25.94■■□□□ 1.74
SAFB2-208ENST00000591120 CADPSQ9ULU8 1353 aa25.91■■□□□ 1.74
SAFB2-208ENST00000591120 THOC2Q8NI27 1593 aaKnown RBP25.82■■□□□ 1.72
SAFB2-208ENST00000591120 WIZO95785 1651 aa25.77■■□□□ 1.72
SAFB2-208ENST00000591120 RSF1Q96T23 1441 aaPredicted RBP25.71■■□□□ 1.71
SAFB2-208ENST00000591120 KIF21AQ7Z4S6 1674 aa25.67■■□□□ 1.7
SAFB2-208ENST00000591120 MRC2Q9UBG0 1479 aa25.64■■□□□ 1.69
SAFB2-208ENST00000591120 CFTRP13569 1480 aa25.57■■□□□ 1.68
SAFB2-208ENST00000591120 WDR62O43379 1518 aa25.54■■□□□ 1.68
SAFB2-208ENST00000591120 FANCD2Q9BXW9 1451 aa25.53■■□□□ 1.68
SAFB2-208ENST00000591120 CEP164Q9UPV0 1460 aa25.53■■□□□ 1.68
SAFB2-208ENST00000591120 TOP2AP11388 1531 aaKnown RBP25.49■■□□□ 1.67
SAFB2-208ENST00000591120 URB2Q14146 1524 aaKnown RBP25.3■■□□□ 1.64
SAFB2-208ENST00000591120 CCDC88BA6NC98 1476 aa25.29■■□□□ 1.64
SAFB2-208ENST00000591120 OSCARQ8IYS5 282 aa25.23■■□□□ 1.63
SAFB2-208ENST00000591120 TRIM41Q8WV44 630 aa25.18■■□□□ 1.62
SAFB2-208ENST00000591120 IFT140Q96RY7 1462 aa25.06■■□□□ 1.6
SAFB2-208ENST00000591120 TOPBP1Q92547 1522 aa25.02■■□□□ 1.6
SAFB2-208ENST00000591120 ABCC8Q09428 1581 aa25.02■■□□□ 1.6
SAFB2-208ENST00000591120 ZNF608Q9ULD9 1512 aaPredicted RBP25■■□□□ 1.59
SAFB2-208ENST00000591120 PRDM2Q13029 1718 aa24.97■■□□□ 1.59
SAFB2-208ENST00000591120 DNMBPQ6XZF7 1577 aa24.88■■□□□ 1.57
SAFB2-208ENST00000591120 AQRO60306 1485 aaKnown RBP eCLIP24.81■■□□□ 1.561e-6■■■□□ 17.3
SAFB2-208ENST00000591120 POLA1P09884 1462 aaPredicted RBP24.78■■□□□ 1.56
SAFB2-208ENST00000591120 TARBP1Q13395 1621 aaKnown RBP24.75■■□□□ 1.55
SAFB2-208ENST00000591120 SOGA1O94964 1423 aa24.74■■□□□ 1.55
SAFB2-208ENST00000591120 EIF4G3O43432 1585 aaKnown RBP24.73■■□□□ 1.55
SAFB2-208ENST00000591120 RAD54L2Q9Y4B4 1467 aa24.7■■□□□ 1.55
SAFB2-208ENST00000591120 TDRD9Q8NDG6 1382 aaKnown RBP24.7■■□□□ 1.55
SAFB2-208ENST00000591120 FBLN2P98095 1184 aa24.69■■□□□ 1.54
SAFB2-208ENST00000591120 ARHGEF11O15085 1522 aa24.66■■□□□ 1.54
SAFB2-208ENST00000591120 RIMBP3CA6NJZ7 1639 aa24.66■■□□□ 1.54
SAFB2-208ENST00000591120 RIMBP3BA6NNM3 1639 aa24.66■■□□□ 1.54
SAFB2-208ENST00000591120 RIMBP3Q9UFD9 1639 aa24.66■■□□□ 1.54
SAFB2-208ENST00000591120 CYB5RLQ6IPT4 315 aa24.62■■□□□ 1.53
SAFB2-208ENST00000591120 FGD5Q6ZNL6 1462 aa24.6■■□□□ 1.53
SAFB2-208ENST00000591120 SUPT5HO00267 1087 aaKnown RBP24.6■■□□□ 1.53
SAFB2-208ENST00000591120 CUX1P39880 1505 aa24.58■■□□□ 1.53
SAFB2-208ENST00000591120 CHMP7Q8WUX9 453 aaPredicted RBP24.54■■□□□ 1.52
SAFB2-208ENST00000591120 SNAPC4Q5SXM2 1469 aa24.5■■□□□ 1.51
SAFB2-208ENST00000591120 WDR97A6NE52 1622 aa24.5■■□□□ 1.51
SAFB2-208ENST00000591120 GRIN2BQ13224 1484 aa24.48■■□□□ 1.51
SAFB2-208ENST00000591120 CHD1O14646 1710 aa24.47■■□□□ 1.51
SAFB2-208ENST00000591120 MAGI1Q96QZ7 1491 aaPredicted RBP24.45■■□□□ 1.51
SAFB2-208ENST00000591120 ARAP1Q96P48 1450 aa24.44■■□□□ 1.5
SAFB2-208ENST00000591120 GAPVD1Q14C86 1478 aa24.39■■□□□ 1.5
SAFB2-208ENST00000591120 SYNJ2O15056 1496 aa24.38■■□□□ 1.49
SAFB2-208ENST00000591120 ABCA10Q8WWZ4 1543 aa24.35■■□□□ 1.49
SAFB2-208ENST00000591120 CLASP1Q7Z460 1538 aa24.35■■□□□ 1.49
SAFB2-208ENST00000591120 SYNJ1O43426 1573 aa24.31■■□□□ 1.48
SAFB2-208ENST00000591120 TRHP20396 242 aaPredicted RBP24.31■■□□□ 1.48
SAFB2-208ENST00000591120 WRNQ14191 1432 aaPredicted RBP eCLIP24.31■■□□□ 1.48
SAFB2-208ENST00000591120 ABCA5Q8WWZ7 1642 aa24.21■■□□□ 1.47
SAFB2-208ENST00000591120 PBRM1Q86U86 1689 aa24.15■■□□□ 1.46
SAFB2-208ENST00000591120 TOP2BQ02880 1626 aa24.14■■□□□ 1.46
SAFB2-208ENST00000591120 GRIN2AQ12879 1464 aa24.13■■□□□ 1.45
SAFB2-208ENST00000591120 FHAD1B1AJZ9 1412 aa24.11■■□□□ 1.45
SAFB2-208ENST00000591120 NUP160Q12769 1436 aa24.1■■□□□ 1.45
SAFB2-208ENST00000591120 BIVM-ERCC5R4GMW8 1640 aa24.09■■□□□ 1.45
SAFB2-208ENST00000591120 ERICH3Q5RHP9 1530 aa24.03■■□□□ 1.44
SAFB2-208ENST00000591120 ADAMTS12P58397 1594 aa24.03■■□□□ 1.44
SAFB2-208ENST00000591120 CEP170Q5SW79 1584 aa23.99■■□□□ 1.43
SAFB2-208ENST00000591120 ERCC6L2Q5T890 1561 aa23.95■■□□□ 1.43
SAFB2-208ENST00000591120 JPH4Q96JJ6 628 aa23.95■■□□□ 1.42
SAFB2-208ENST00000591120 PRG4Q92954 1404 aaPredicted RBP23.87■■□□□ 1.41
SAFB2-208ENST00000591120 SHROOM2Q13796 1616 aa23.87■■□□□ 1.41
SAFB2-208ENST00000591120 IGF1RP08069 1367 aa23.86■■□□□ 1.41
SAFB2-208ENST00000591120 KIF27Q86VH2 1401 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms