RNA–Protein interactions for RNA: ENST00000290418.4

CCDC142-201, Transcript of coiled-coil domain containing 142, humanhuman

APPRIS P2 TSL 2 BASIC

Gene CCDC142, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-201ENST00000290418 NISCHQ9Y2I1 1504 aa36.09■■■■□ 3.37
CCDC142-201ENST00000290418 SHROOM4Q9ULL8 1493 aa31.12■■■□□ 2.57
CCDC142-201ENST00000290418 DCAF8L2P0C7V8 631 aa30.71■■■□□ 2.51
CCDC142-201ENST00000290418 CCDC180Q9P1Z9 1646 aa30.58■■■□□ 2.49
CCDC142-201ENST00000290418 ZCCHC6Q5VYS8 1495 aaKnown RBP30.4■■■□□ 2.46
CCDC142-201ENST00000290418 SUPT5HO00267 1087 aaKnown RBP30.31■■■□□ 2.44
CCDC142-201ENST00000290418 DCAF1Q9Y4B6 1507 aa29.3■■■□□ 2.28
CCDC142-201ENST00000290418 ABCC9O60706 1549 aa29.24■■■□□ 2.27
CCDC142-201ENST00000290418 SCRIBQ14160 1630 aa29.08■■■□□ 2.25
CCDC142-201ENST00000290418 CHIC1Q5VXU3 224 aa29.02■■■□□ 2.24
CCDC142-201ENST00000290418 MYO15BQ96JP2 1530 aa28.89■■■□□ 2.22
CCDC142-201ENST00000290418 RSF1Q96T23 1441 aaPredicted RBP28.53■■■□□ 2.16
CCDC142-201ENST00000290418 NACADO15069 1562 aa28.45■■■□□ 2.15
CCDC142-201ENST00000290418 CECR2Q9BXF3 1484 aa28.43■■■□□ 2.14
CCDC142-201ENST00000290418 LOC105371045A0A1W2PR82 267 aa28.41■■■□□ 2.14
CCDC142-201ENST00000290418 RB1CC1Q8TDY2 1594 aa28.25■■■□□ 2.11
CCDC142-201ENST00000290418 MROH2BQ7Z745 1585 aa28.19■■■□□ 2.1
CCDC142-201ENST00000290418 EHMT2Q96KQ7 1210 aa28.16■■■□□ 2.1
CCDC142-201ENST00000290418 FAM9AQ8IZU1 332 aaPredicted RBP28.13■■■□□ 2.09
CCDC142-201ENST00000290418 PABPN1Q86U42 306 aaKnown RBP eCLIP28.07■■■□□ 2.08
CCDC142-201ENST00000290418 HRCP23327 699 aa28.05■■■□□ 2.08
CCDC142-201ENST00000290418 WIZO95785 1651 aa28.04■■■□□ 2.08
CCDC142-201ENST00000290418 TRIM41Q8WV44 630 aa28.04■■■□□ 2.08
CCDC142-201ENST00000290418 PCGF6Q9BYE7 350 aa27.98■■■□□ 2.07
CCDC142-201ENST00000290418 PPARGC1BQ86YN6 1023 aaKnown RBP27.87■■■□□ 2.05
CCDC142-201ENST00000290418 UNC13AQ9UPW8 1703 aa27.82■■■□□ 2.04
CCDC142-201ENST00000290418 BAZ1AQ9NRL2 1556 aaPredicted RBP27.68■■■□□ 2.02
CCDC142-201ENST00000290418 SMARCA4P51532 1647 aa27.55■■■□□ 2
CCDC142-201ENST00000290418 BICRAQ9NZM4 1560 aa27.5■■□□□ 1.99
CCDC142-201ENST00000290418 CCDC88BA6NC98 1476 aa27.43■■□□□ 1.98
CCDC142-201ENST00000290418 ABCC8Q09428 1581 aa27.4■■□□□ 1.98
CCDC142-201ENST00000290418 TOP2AP11388 1531 aaKnown RBP27.38■■□□□ 1.97
CCDC142-201ENST00000290418 SMARCA2P51531 1590 aa27.3■■□□□ 1.96
CCDC142-201ENST00000290418 EIF4G1Q04637 1599 aaKnown RBP27.26■■□□□ 1.95
CCDC142-201ENST00000290418 TRIM26Q12899 539 aaPredicted RBP27.2■■□□□ 1.94
CCDC142-201ENST00000290418 TTBK1Q5TCY1 1321 aaPredicted RBP27.1■■□□□ 1.93
CCDC142-201ENST00000290418 SOGA1O94964 1423 aa27.07■■□□□ 1.92
CCDC142-201ENST00000290418 RUSC2Q8N2Y8 1516 aa27.01■■□□□ 1.91
CCDC142-201ENST00000290418 ATAD2BQ9ULI0 1458 aa27■■□□□ 1.91
CCDC142-201ENST00000290418 BAZ1BQ9UIG0 1483 aaKnown RBP26.93■■□□□ 1.9
CCDC142-201ENST00000290418 UBTFP17480 764 aaKnown RBP26.85■■□□□ 1.89
CCDC142-201ENST00000290418 PEG3Q9GZU2 1588 aa26.84■■□□□ 1.89
CCDC142-201ENST00000290418 WRNQ14191 1432 aaPredicted RBP eCLIP26.81■■□□□ 1.88
CCDC142-201ENST00000290418 CSRNP3Q8WYN3 585 aa26.79■■□□□ 1.88
CCDC142-201ENST00000290418 RANGAP1P46060 587 aaPredicted RBP26.78■■□□□ 1.88
CCDC142-201ENST00000290418 SYNJ1O43426 1573 aa26.72■■□□□ 1.87
CCDC142-201ENST00000290418 CEP162Q5TB80 1403 aa26.65■■□□□ 1.86
CCDC142-201ENST00000290418 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.52■■□□□ 1.84
CCDC142-201ENST00000290418 TNIKQ9UKE5 1360 aa26.49■■□□□ 1.83
CCDC142-201ENST00000290418 SCAF1Q9H7N4 1312 aaKnown RBP26.43■■□□□ 1.82
CCDC142-201ENST00000290418 GOLGA3Q08378 1498 aa26.43■■□□□ 1.82
CCDC142-201ENST00000290418 EEA1Q15075 1411 aa26.42■■□□□ 1.82
CCDC142-201ENST00000290418 NCAPD3P42695 1498 aa26.42■■□□□ 1.82
CCDC142-201ENST00000290418 ZEB1P37275 1124 aaPredicted RBP26.37■■□□□ 1.81
CCDC142-201ENST00000290418 RAPGEF2Q9Y4G8 1499 aa26.36■■□□□ 1.81
CCDC142-201ENST00000290418 CCER1Q8TC90 406 aaPredicted RBP26.3■■□□□ 1.8
CCDC142-201ENST00000290418 HMGXB3Q12766 1538 aa26.29■■□□□ 1.8
CCDC142-201ENST00000290418 CEP164Q9UPV0 1460 aa26.29■■□□□ 1.8
CCDC142-201ENST00000290418 TOP2BQ02880 1626 aa26.25■■□□□ 1.79
CCDC142-201ENST00000290418 CLIP1P30622 1438 aa26.23■■□□□ 1.79
CCDC142-201ENST00000290418 CUX1P39880 1505 aa26.23■■□□□ 1.79
CCDC142-201ENST00000290418 CFTRP13569 1480 aa26.16■■□□□ 1.78
CCDC142-201ENST00000290418 KIF21BO75037 1637 aa26.15■■□□□ 1.78
CCDC142-201ENST00000290418 HNRNPUL2Q1KMD3 747 aaKnown RBP26.14■■□□□ 1.77
CCDC142-201ENST00000290418 CC2D2AQ9P2K1 1620 aa26.12■■□□□ 1.77
CCDC142-201ENST00000290418 BIVM-ERCC5R4GMW8 1640 aa26.09■■□□□ 1.77
CCDC142-201ENST00000290418 PELP1Q8IZL8 1130 aaKnown RBP26.06■■□□□ 1.76
CCDC142-201ENST00000290418 DNAJC5BQ9UF47 199 aa26.06■■□□□ 1.76
CCDC142-201ENST00000290418 APLP2Q06481 763 aa26.02■■□□□ 1.76
CCDC142-201ENST00000290418 CADPSQ9ULU8 1353 aa26.01■■□□□ 1.75
CCDC142-201ENST00000290418 VPS8Q8N3P4 1428 aa25.97■■□□□ 1.75
CCDC142-201ENST00000290418 KIF27Q86VH2 1401 aa25.97■■□□□ 1.75
CCDC142-201ENST00000290418 NESP48681 1621 aa25.95■■□□□ 1.75
CCDC142-201ENST00000290418 PRXQ9BXM0 1461 aa25.94■■□□□ 1.74
CCDC142-201ENST00000290418 CUX2O14529 1486 aa25.93■■□□□ 1.74
CCDC142-201ENST00000290418 NEUROD1Q13562 356 aa25.91■■□□□ 1.74
CCDC142-201ENST00000290418 KANK4Q5T7N3 995 aaPredicted RBP25.87■■□□□ 1.73
CCDC142-201ENST00000290418 FGD5Q6ZNL6 1462 aa25.85■■□□□ 1.73
CCDC142-201ENST00000290418 ARAP1Q96P48 1450 aa25.82■■□□□ 1.72
CCDC142-201ENST00000290418 P3H3Q8IVL6 736 aa25.82■■□□□ 1.72
CCDC142-201ENST00000290418 ACIN1Q9UKV3 1341 aaKnown RBP25.81■■□□□ 1.72
CCDC142-201ENST00000290418 FANCD2Q9BXW9 1451 aa25.81■■□□□ 1.72
CCDC142-201ENST00000290418 IGF1RP08069 1367 aa25.79■■□□□ 1.72
CCDC142-201ENST00000290418 RAD54L2Q9Y4B4 1467 aa25.78■■□□□ 1.72
CCDC142-201ENST00000290418 ERICH3Q5RHP9 1530 aa25.76■■□□□ 1.72
CCDC142-201ENST00000290418 GTF3C3Q9Y5Q9 886 aa25.72■■□□□ 1.71
CCDC142-201ENST00000290418 PRDM2Q13029 1718 aa25.71■■□□□ 1.71
CCDC142-201ENST00000290418 ITGAEP38570 1179 aa25.71■■□□□ 1.71
CCDC142-201ENST00000290418 ATP1B4Q9UN42 357 aaPredicted RBP25.7■■□□□ 1.71
CCDC142-201ENST00000290418 DIEXFQ68CQ4 756 aaKnown RBP25.69■■□□□ 1.7
CCDC142-201ENST00000290418 CARMIL1Q5VZK9 1371 aa25.69■■□□□ 1.7
CCDC142-201ENST00000290418 ARHGAP35Q9NRY4 1499 aa25.67■■□□□ 1.7
CCDC142-201ENST00000290418 POLA1P09884 1462 aaPredicted RBP25.57■■□□□ 1.68
CCDC142-201ENST00000290418 TOPBP1Q92547 1522 aa25.56■■□□□ 1.68
CCDC142-201ENST00000290418 TDRD9Q8NDG6 1382 aaKnown RBP25.54■■□□□ 1.68
CCDC142-201ENST00000290418 YTHDC1Q96MU7 727 aaKnown RBP25.5■■□□□ 1.67
CCDC142-201ENST00000290418 CENPBP07199 599 aaPredicted RBP25.48■■□□□ 1.67
CCDC142-201ENST00000290418 DNMBPQ6XZF7 1577 aa25.47■■□□□ 1.67
CCDC142-201ENST00000290418 URB2Q14146 1524 aaKnown RBP25.47■■□□□ 1.67
CCDC142-201ENST00000290418 FHOD3Q2V2M9 1422 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms