RNA–Protein interactions for RNA: ENST00000454269.5

HCG18-240, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 2,430 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-240ENST00000454269 CHIC1Q5VXU3 224 aa17.87■□□□□ 0.45
HCG18-240ENST00000454269 AEBP2Q6ZN18 517 aaPredicted RBP17.6■□□□□ 0.41
HCG18-240ENST00000454269 PELP1Q8IZL8 1130 aaKnown RBP16.34■□□□□ 0.21
HCG18-240ENST00000454269 MYT1Q01538 1121 aa16.26■□□□□ 0.19
HCG18-240ENST00000454269 NISCHQ9Y2I1 1504 aa16.04■□□□□ 0.16
HCG18-240ENST00000454269 PHF23Q9BUL5 403 aaPredicted RBP15.95■□□□□ 0.14
HCG18-240ENST00000454269 TTBK1Q5TCY1 1321 aaPredicted RBP15.82■□□□□ 0.12
HCG18-240ENST00000454269 SLC24A1O60721 1099 aa15.46■□□□□ 0.07
HCG18-240ENST00000454269 PRKCSHP14314 528 aaPredicted RBP15.29■□□□□ 0.04
HCG18-240ENST00000454269 APLP2Q06481 763 aa15.13■□□□□ 0.01
HCG18-240ENST00000454269 ERICH6Q7L0X2 663 aa15.11■□□□□ 0.01
HCG18-240ENST00000454269 PLPPR3Q6T4P5 718 aa14.83□□□□□ -0.04
HCG18-240ENST00000454269 DAXXQ9UER7 740 aaPredicted RBP14.73□□□□□ -0.05
HCG18-240ENST00000454269 BCL11AQ9H165 835 aa14.63□□□□□ -0.07
HCG18-240ENST00000454269 SENP3Q9H4L4 574 aaPredicted RBP14.58□□□□□ -0.08
HCG18-240ENST00000454269 HRCP23327 699 aa14.44□□□□□ -0.1
HCG18-240ENST00000454269 FAM9AQ8IZU1 332 aaPredicted RBP14.4□□□□□ -0.1
HCG18-240ENST00000454269 ABCC9O60706 1549 aa14.39□□□□□ -0.11
HCG18-240ENST00000454269 SCAF1Q9H7N4 1312 aaKnown RBP14.34□□□□□ -0.11
HCG18-240ENST00000454269 CCDC180Q9P1Z9 1646 aa14.32□□□□□ -0.12
HCG18-240ENST00000454269 EIF5BO60841 1220 aaKnown RBP14.16□□□□□ -0.14
HCG18-240ENST00000454269 EHMT2Q96KQ7 1210 aa14.1□□□□□ -0.15
HCG18-240ENST00000454269 ADRA2BP18089 450 aa14.09□□□□□ -0.15
HCG18-240ENST00000454269 CENPBP07199 599 aaPredicted RBP14.04□□□□□ -0.16
HCG18-240ENST00000454269 KCNA4P22459 653 aa14□□□□□ -0.17
HCG18-240ENST00000454269 PPP6R1Q9UPN7 881 aa13.83□□□□□ -0.19
HCG18-240ENST00000454269 PPARGC1BQ86YN6 1023 aaKnown RBP13.76□□□□□ -0.21
HCG18-240ENST00000454269 UBE2Q2Q8WVN8 375 aa13.74□□□□□ -0.21
HCG18-240ENST00000454269 NCBP3Q53F19 620 aaKnown RBP13.72□□□□□ -0.21
HCG18-240ENST00000454269 ANP32EQ9BTT0 268 aa13.72□□□□□ -0.21
HCG18-240ENST00000454269 PLEKHG5O94827 1062 aa13.72□□□□□ -0.21
HCG18-240ENST00000454269 ACIN1Q9UKV3 1341 aaKnown RBP13.65□□□□□ -0.23
HCG18-240ENST00000454269 DCAF8L2P0C7V8 631 aa13.59□□□□□ -0.23
HCG18-240ENST00000454269 FOXD1Q16676 465 aa13.58□□□□□ -0.24
HCG18-240ENST00000454269 RB1CC1Q8TDY2 1594 aa13.57□□□□□ -0.24
HCG18-240ENST00000454269 PODXL2Q9NZ53 605 aa13.55□□□□□ -0.24
HCG18-240ENST00000454269 CSRNP3Q8WYN3 585 aa13.54□□□□□ -0.24
HCG18-240ENST00000454269 UNC13AQ9UPW8 1703 aa13.53□□□□□ -0.24
HCG18-240ENST00000454269 ARXQ96QS3 562 aa13.5□□□□□ -0.25
HCG18-240ENST00000454269 DNAJC5BQ9UF47 199 aa13.49□□□□□ -0.25
HCG18-240ENST00000454269 GTF3C3Q9Y5Q9 886 aa13.48□□□□□ -0.25
HCG18-240ENST00000454269 NACADO15069 1562 aa13.47□□□□□ -0.25
HCG18-240ENST00000454269 ANO8Q9HCE9 1232 aaPredicted RBP13.44□□□□□ -0.26
HCG18-240ENST00000454269 PABPN1Q86U42 306 aaKnown RBP eCLIP13.42□□□□□ -0.26
HCG18-240ENST00000454269 NEUROD1Q13562 356 aa13.41□□□□□ -0.26
HCG18-240ENST00000454269 RANGAP1P46060 587 aaPredicted RBP13.4□□□□□ -0.26
HCG18-240ENST00000454269 PKNOX2Q96KN3 472 aa13.39□□□□□ -0.27
HCG18-240ENST00000454269 SLC4A1APQ9BWU0 796 aaKnown RBP13.38□□□□□ -0.27
HCG18-240ENST00000454269 BICRAQ9NZM4 1560 aa13.33□□□□□ -0.28
HCG18-240ENST00000454269 ZCCHC6Q5VYS8 1495 aaKnown RBP13.33□□□□□ -0.28
HCG18-240ENST00000454269 ZEB1P37275 1124 aaPredicted RBP13.32□□□□□ -0.28
HCG18-240ENST00000454269 KLHL34Q8N239 644 aa13.29□□□□□ -0.28
HCG18-240ENST00000454269 PPP4R3CPQ6ZMV5 832 aa13.24□□□□□ -0.29
HCG18-240ENST00000454269 SCRIBQ14160 1630 aa13.23□□□□□ -0.29
HCG18-240ENST00000454269 MYO15BQ96JP2 1530 aa13.22□□□□□ -0.29
HCG18-240ENST00000454269 PCGF6Q9BYE7 350 aa13.2□□□□□ -0.3
HCG18-240ENST00000454269 ERICH6BQ5W0A0 696 aa13.17□□□□□ -0.3
HCG18-240ENST00000454269 NEFLP07196 543 aa13.15□□□□□ -0.3
HCG18-240ENST00000454269 RTN4Q9NQC3 1192 aaKnown RBP13.14□□□□□ -0.31
HCG18-240ENST00000454269 TIMELESSQ9UNS1 1208 aa13.14□□□□□ -0.31
HCG18-240ENST00000454269 PDIA4P13667 645 aaKnown RBP13.13□□□□□ -0.31
HCG18-240ENST00000454269 DCAF1Q9Y4B6 1507 aa13.13□□□□□ -0.31
HCG18-240ENST00000454269 SALL2Q9Y467 1007 aaPredicted RBP13.09□□□□□ -0.31
HCG18-240ENST00000454269 PDE4CQ08493 712 aa13.07□□□□□ -0.32
HCG18-240ENST00000454269 MYT1LQ9UL68 1186 aa13.02□□□□□ -0.33
HCG18-240ENST00000454269 NPM3O75607 178 aaKnown RBP12.99□□□□□ -0.33
HCG18-240ENST00000454269 CC2D2AQ9P2K1 1620 aa12.98□□□□□ -0.33
HCG18-240ENST00000454269 ZBTB22O15209 634 aa12.98□□□□□ -0.33
HCG18-240ENST00000454269 HOMEZQ8IX15 550 aa12.97□□□□□ -0.33
HCG18-240ENST00000454269 PIAS4Q8N2W9 510 aaPredicted RBP12.96□□□□□ -0.33
HCG18-240ENST00000454269 CCDC136Q96JN2 1154 aa12.95□□□□□ -0.34
HCG18-240ENST00000454269 EIF4G1Q04637 1599 aaKnown RBP12.93□□□□□ -0.34
HCG18-240ENST00000454269 FGD1P98174 961 aa12.92□□□□□ -0.34
HCG18-240ENST00000454269 TSHZ2Q9NRE2 1034 aa12.91□□□□□ -0.34
HCG18-240ENST00000454269 SHROOM4Q9ULL8 1493 aa12.9□□□□□ -0.34
HCG18-240ENST00000454269 CECR2Q9BXF3 1484 aa12.86□□□□□ -0.35
HCG18-240ENST00000454269 TULP1O00294 542 aaPredicted RBP12.85□□□□□ -0.35
HCG18-240ENST00000454269 TAF7LQ5H9L4 462 aa12.85□□□□□ -0.35
HCG18-240ENST00000454269 CLSPNQ9HAW4 1339 aa12.85□□□□□ -0.35
HCG18-240ENST00000454269 BCL11BQ9C0K0 894 aaPredicted RBP12.8□□□□□ -0.36
HCG18-240ENST00000454269 AAMPQ13685 434 aa12.76□□□□□ -0.37
HCG18-240ENST00000454269 GLIPR1L2Q4G1C9 344 aa12.72□□□□□ -0.37
HCG18-240ENST00000454269 AMER1Q5JTC6 1135 aaPredicted RBP12.71□□□□□ -0.37
HCG18-240ENST00000454269 DEKP35659 375 aaKnown RBP12.7□□□□□ -0.38
HCG18-240ENST00000454269 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.68□□□□□ -0.38
HCG18-240ENST00000454269 NPM2Q86SE8 214 aaKnown RBP12.66□□□□□ -0.38
HCG18-240ENST00000454269 ZMYND15Q9H091 742 aa12.66□□□□□ -0.38
HCG18-240ENST00000454269 RSPH6AQ9H0K4 717 aa12.64□□□□□ -0.39
HCG18-240ENST00000454269 A0A0U1RQG5 324 aaPredicted RBP12.63□□□□□ -0.39
HCG18-240ENST00000454269 BRD2P25440 801 aaKnown RBP12.63□□□□□ -0.39
HCG18-240ENST00000454269 TRIM26Q12899 539 aaPredicted RBP12.63□□□□□ -0.39
HCG18-240ENST00000454269 RBM10P98175 930 aaKnown RBP12.62□□□□□ -0.39
HCG18-240ENST00000454269 CNKSR2Q8WXI2 1034 aa12.61□□□□□ -0.39
HCG18-240ENST00000454269 CHMP4AQ9BY43 222 aa12.6□□□□□ -0.39
HCG18-240ENST00000454269 RSPH4AQ5TD94 716 aa12.57□□□□□ -0.4
HCG18-240ENST00000454269 SUPT16HQ9Y5B9 1047 aaKnown RBP12.57□□□□□ -0.4
HCG18-240ENST00000454269 DIEXFQ68CQ4 756 aaKnown RBP12.56□□□□□ -0.4
HCG18-240ENST00000454269 SMARCA4P51532 1647 aa12.55□□□□□ -0.4
HCG18-240ENST00000454269 ZNF326Q5BKZ1 582 aaKnown RBP12.52□□□□□ -0.4
HCG18-240ENST00000454269 SUPT5HO00267 1087 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms