RNA–Protein interactions for RNA: ENST00000495192.1

GSE1-210, Transcript of Gse1 coiled-coil protein, humanhuman

TSL 2

Gene GSE1, Length 618 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-210ENST00000495192 NISCHQ9Y2I1 1504 aa30.85■■■□□ 2.53
GSE1-210ENST00000495192 ABCC9O60706 1549 aa28.21■■■□□ 2.11
GSE1-210ENST00000495192 CCDC180Q9P1Z9 1646 aa27.92■■■□□ 2.06
GSE1-210ENST00000495192 DNAJC5BQ9UF47 199 aa26.86■■□□□ 1.89
GSE1-210ENST00000495192 RB1CC1Q8TDY2 1594 aa26.68■■□□□ 1.86
GSE1-210ENST00000495192 NACADO15069 1562 aa26.41■■□□□ 1.82
GSE1-210ENST00000495192 UNC13AQ9UPW8 1703 aa26.3■■□□□ 1.8
GSE1-210ENST00000495192 PABPN1Q86U42 306 aaKnown RBP eCLIP26.16■■□□□ 1.78
GSE1-210ENST00000495192 DCAF8L2P0C7V8 631 aa26.04■■□□□ 1.76
GSE1-210ENST00000495192 BICRAQ9NZM4 1560 aa26.03■■□□□ 1.76
GSE1-210ENST00000495192 MYO15BQ96JP2 1530 aa25.92■■□□□ 1.74
GSE1-210ENST00000495192 CC2D2AQ9P2K1 1620 aa25.52■■□□□ 1.68
GSE1-210ENST00000495192 SHROOM4Q9ULL8 1493 aa25.5■■□□□ 1.67
GSE1-210ENST00000495192 ZCCHC6Q5VYS8 1495 aaKnown RBP25.49■■□□□ 1.67
GSE1-210ENST00000495192 DCAF1Q9Y4B6 1507 aa25.45■■□□□ 1.66
GSE1-210ENST00000495192 CECR2Q9BXF3 1484 aa25.43■■□□□ 1.66
GSE1-210ENST00000495192 SCRIBQ14160 1630 aa25.37■■□□□ 1.65
GSE1-210ENST00000495192 EIF4G1Q04637 1599 aaKnown RBP25.35■■□□□ 1.65
GSE1-210ENST00000495192 DNAJC5Q9H3Z4 198 aa24.87■■□□□ 1.57
GSE1-210ENST00000495192 CUX2O14529 1486 aa24.45■■□□□ 1.5
GSE1-210ENST00000495192 NCAPD3P42695 1498 aa24.38■■□□□ 1.49
GSE1-210ENST00000495192 ERCC6Q03468 1493 aa24.3■■□□□ 1.48
GSE1-210ENST00000495192 ATAD2BQ9ULI0 1458 aa24.26■■□□□ 1.47
GSE1-210ENST00000495192 SMARCA4P51532 1647 aa24.19■■□□□ 1.46
GSE1-210ENST00000495192 HMGXB3Q12766 1538 aa24.18■■□□□ 1.46
GSE1-210ENST00000495192 NESP48681 1621 aa24.17■■□□□ 1.46
GSE1-210ENST00000495192 SMARCA2P51531 1590 aa24.14■■□□□ 1.45
GSE1-210ENST00000495192 THOC2Q8NI27 1593 aaKnown RBP24.05■■□□□ 1.44
GSE1-210ENST00000495192 BAZ1BQ9UIG0 1483 aaKnown RBP23.96■■□□□ 1.43
GSE1-210ENST00000495192 PEG3Q9GZU2 1588 aa23.95■■□□□ 1.43
GSE1-210ENST00000495192 BAZ1AQ9NRL2 1556 aaPredicted RBP23.95■■□□□ 1.42
GSE1-210ENST00000495192 KIF21AQ7Z4S6 1674 aa23.92■■□□□ 1.42
GSE1-210ENST00000495192 LAMC3Q9Y6N6 1575 aa23.91■■□□□ 1.42
GSE1-210ENST00000495192 MROH2BQ7Z745 1585 aa23.79■■□□□ 1.4
GSE1-210ENST00000495192 PDS5BQ9NTI5 1447 aa23.68■■□□□ 1.38
GSE1-210ENST00000495192 WDR62O43379 1518 aa23.58■■□□□ 1.36
GSE1-210ENST00000495192 MRC2Q9UBG0 1479 aa23.57■■□□□ 1.36
GSE1-210ENST00000495192 CADPSQ9ULU8 1353 aa23.57■■□□□ 1.36
GSE1-210ENST00000495192 TRIM41Q8WV44 630 aa23.56■■□□□ 1.36
GSE1-210ENST00000495192 WIZO95785 1651 aa23.54■■□□□ 1.36
GSE1-210ENST00000495192 CEP164Q9UPV0 1460 aa23.38■■□□□ 1.33
GSE1-210ENST00000495192 FANCD2Q9BXW9 1451 aa23.34■■□□□ 1.33
GSE1-210ENST00000495192 CFTRP13569 1480 aa23.27■■□□□ 1.32
GSE1-210ENST00000495192 URB2Q14146 1524 aaKnown RBP23.23■■□□□ 1.31
GSE1-210ENST00000495192 OSCARQ8IYS5 282 aa23.19■■□□□ 1.3
GSE1-210ENST00000495192 PRDM2Q13029 1718 aa23.16■■□□□ 1.3
GSE1-210ENST00000495192 TOP2AP11388 1531 aaKnown RBP23.14■■□□□ 1.3
GSE1-210ENST00000495192 RSF1Q96T23 1441 aaPredicted RBP23.11■■□□□ 1.29
GSE1-210ENST00000495192 RIMBP3CA6NJZ7 1639 aa23.1■■□□□ 1.29
GSE1-210ENST00000495192 RIMBP3BA6NNM3 1639 aa23.1■■□□□ 1.29
GSE1-210ENST00000495192 RIMBP3Q9UFD9 1639 aa23.1■■□□□ 1.29
GSE1-210ENST00000495192 ZNF608Q9ULD9 1512 aaPredicted RBP23■■□□□ 1.27
GSE1-210ENST00000495192 ARHGEF11O15085 1522 aa22.93■■□□□ 1.26
GSE1-210ENST00000495192 IFT140Q96RY7 1462 aa22.92■■□□□ 1.26
GSE1-210ENST00000495192 TOPBP1Q92547 1522 aa22.88■■□□□ 1.25
GSE1-210ENST00000495192 EIF4G3O43432 1585 aaKnown RBP22.88■■□□□ 1.25
GSE1-210ENST00000495192 CCDC88BA6NC98 1476 aa22.87■■□□□ 1.25
GSE1-210ENST00000495192 CHD1O14646 1710 aa22.84■■□□□ 1.25
GSE1-210ENST00000495192 TARBP1Q13395 1621 aaKnown RBP22.79■■□□□ 1.24
GSE1-210ENST00000495192 DNMBPQ6XZF7 1577 aa22.76■■□□□ 1.23
GSE1-210ENST00000495192 ABCC8Q09428 1581 aa22.73■■□□□ 1.23
GSE1-210ENST00000495192 AQRO60306 1485 aaKnown RBP eCLIP22.7■■□□□ 1.225e-18■■■■■ 79.7
GSE1-210ENST00000495192 ARAP1Q96P48 1450 aa22.69■■□□□ 1.22
GSE1-210ENST00000495192 CYB5RLQ6IPT4 315 aa22.69■■□□□ 1.22
GSE1-210ENST00000495192 POLA1P09884 1462 aaPredicted RBP22.62■■□□□ 1.21
GSE1-210ENST00000495192 RAD54L2Q9Y4B4 1467 aa22.54■■□□□ 1.2
GSE1-210ENST00000495192 TRHP20396 242 aaPredicted RBP22.51■■□□□ 1.19
GSE1-210ENST00000495192 FBLN2P98095 1184 aa22.51■■□□□ 1.19
GSE1-210ENST00000495192 CLASP1Q7Z460 1538 aa22.51■■□□□ 1.19
GSE1-210ENST00000495192 TDRD9Q8NDG6 1382 aaKnown RBP22.47■■□□□ 1.19
GSE1-210ENST00000495192 SNAPC4Q5SXM2 1469 aa22.46■■□□□ 1.19
GSE1-210ENST00000495192 SOGA1O94964 1423 aa22.45■■□□□ 1.18
GSE1-210ENST00000495192 WDR97A6NE52 1622 aa22.45■■□□□ 1.18
GSE1-210ENST00000495192 FGD5Q6ZNL6 1462 aa22.41■■□□□ 1.18
GSE1-210ENST00000495192 SYNJ1O43426 1573 aa22.38■■□□□ 1.17
GSE1-210ENST00000495192 CUX1P39880 1505 aa22.37■■□□□ 1.17
GSE1-210ENST00000495192 MAGI1Q96QZ7 1491 aaPredicted RBP22.35■■□□□ 1.17
GSE1-210ENST00000495192 PBRM1Q86U86 1689 aa22.34■■□□□ 1.17
GSE1-210ENST00000495192 GRIN2BQ13224 1484 aa22.31■■□□□ 1.16
GSE1-210ENST00000495192 SYNJ2O15056 1496 aa22.29■■□□□ 1.16
GSE1-210ENST00000495192 CHMP7Q8WUX9 453 aaPredicted RBP22.28■■□□□ 1.16
GSE1-210ENST00000495192 GAPVD1Q14C86 1478 aa22.22■■□□□ 1.15
GSE1-210ENST00000495192 ABCA5Q8WWZ7 1642 aa22.21■■□□□ 1.15
GSE1-210ENST00000495192 ERCC6L2Q5T890 1561 aa22.16■■□□□ 1.14
GSE1-210ENST00000495192 ABCA10Q8WWZ4 1543 aa22.13■■□□□ 1.13
GSE1-210ENST00000495192 AEBP2Q6ZN18 517 aaPredicted RBP22.11■■□□□ 1.13
GSE1-210ENST00000495192 CEP170Q5SW79 1584 aa22.06■■□□□ 1.12
GSE1-210ENST00000495192 GRIN2AQ12879 1464 aa22.05■■□□□ 1.12
GSE1-210ENST00000495192 ADAMTS12P58397 1594 aa22.04■■□□□ 1.12
GSE1-210ENST00000495192 SHROOM2Q13796 1616 aa22.03■■□□□ 1.12
GSE1-210ENST00000495192 KIF13AQ9H1H9 1805 aa22.03■■□□□ 1.12
GSE1-210ENST00000495192 NUP160Q12769 1436 aa22.01■■□□□ 1.11
GSE1-210ENST00000495192 BIVM-ERCC5R4GMW8 1640 aa21.95■■□□□ 1.1
GSE1-210ENST00000495192 TOP2BQ02880 1626 aa21.91■■□□□ 1.1
GSE1-210ENST00000495192 WRNQ14191 1432 aaPredicted RBP eCLIP21.89■■□□□ 1.1
GSE1-210ENST00000495192 FHAD1B1AJZ9 1412 aa21.88■■□□□ 1.09
GSE1-210ENST00000495192 ERICH3Q5RHP9 1530 aa21.85■■□□□ 1.09
GSE1-210ENST00000495192 PRG4Q92954 1404 aaPredicted RBP21.78■■□□□ 1.08
GSE1-210ENST00000495192 RUSC2Q8N2Y8 1516 aa21.75■■□□□ 1.07
GSE1-210ENST00000495192 JPH4Q96JJ6 628 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms