RNA–Protein interactions for RNA: ENST00000444126.5

HCG18-237, Transcript of HLA complex group 18, humanhuman

TSL 5 BASIC

Gene HCG18, Length 4,605 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-237ENST00000444126 NISCHQ9Y2I1 1504 aa11.67□□□□□ -0.54
HCG18-237ENST00000444126 DCAF8L2P0C7V8 631 aa11.08□□□□□ -0.64
HCG18-237ENST00000444126 EHMT2Q96KQ7 1210 aa11.01□□□□□ -0.65
HCG18-237ENST00000444126 SLC24A1O60721 1099 aa11.01□□□□□ -0.65
HCG18-237ENST00000444126 MYT1Q01538 1121 aa10.64□□□□□ -0.71
HCG18-237ENST00000444126 PELP1Q8IZL8 1130 aaKnown RBP10.53□□□□□ -0.72
HCG18-237ENST00000444126 SHROOM4Q9ULL8 1493 aa10.52□□□□□ -0.73
HCG18-237ENST00000444126 SUPT5HO00267 1087 aaKnown RBP10.47□□□□□ -0.73
HCG18-237ENST00000444126 CHIC1Q5VXU3 224 aa10.46□□□□□ -0.74
HCG18-237ENST00000444126 RANGAP1P46060 587 aaPredicted RBP10.09□□□□□ -0.79
HCG18-237ENST00000444126 PLPPR3Q6T4P5 718 aa9.98□□□□□ -0.81
HCG18-237ENST00000444126 ERICH6Q7L0X2 663 aa9.97□□□□□ -0.81
HCG18-237ENST00000444126 RTN4Q9NQC3 1192 aaKnown RBP9.96□□□□□ -0.81
HCG18-237ENST00000444126 ABCC9O60706 1549 aa9.92□□□□□ -0.82
HCG18-237ENST00000444126 TTBK1Q5TCY1 1321 aaPredicted RBP9.91□□□□□ -0.82
HCG18-237ENST00000444126 DAXXQ9UER7 740 aaPredicted RBP9.81□□□□□ -0.84
HCG18-237ENST00000444126 CCDC180Q9P1Z9 1646 aa9.79□□□□□ -0.84
HCG18-237ENST00000444126 FAM9AQ8IZU1 332 aaPredicted RBP9.79□□□□□ -0.84
HCG18-237ENST00000444126 AMER1Q5JTC6 1135 aaPredicted RBP9.77□□□□□ -0.84
HCG18-237ENST00000444126 TRIM41Q8WV44 630 aa9.77□□□□□ -0.85
HCG18-237ENST00000444126 PRKCSHP14314 528 aaPredicted RBP9.73□□□□□ -0.85
HCG18-237ENST00000444126 ZCCHC6Q5VYS8 1495 aaKnown RBP9.7□□□□□ -0.86
HCG18-237ENST00000444126 PABPN1Q86U42 306 aaKnown RBP eCLIP9.67□□□□□ -0.86
HCG18-237ENST00000444126 APLP2Q06481 763 aa9.66□□□□□ -0.86
HCG18-237ENST00000444126 AEBP2Q6ZN18 517 aaPredicted RBP9.65□□□□□ -0.86
HCG18-237ENST00000444126 NCBP3Q53F19 620 aaKnown RBP9.58□□□□□ -0.88
HCG18-237ENST00000444126 UBTFP17480 764 aaKnown RBP9.54□□□□□ -0.88
HCG18-237ENST00000444126 TULP1O00294 542 aaPredicted RBP9.54□□□□□ -0.88
HCG18-237ENST00000444126 HAP1P54257 671 aaPredicted RBP9.54□□□□□ -0.88
HCG18-237ENST00000444126 SCRIBQ14160 1630 aa9.52□□□□□ -0.88
HCG18-237ENST00000444126 KCNA4P22459 653 aa9.48□□□□□ -0.89
HCG18-237ENST00000444126 TPRNQ4KMQ1 711 aa9.46□□□□□ -0.89
HCG18-237ENST00000444126 PCGF6Q9BYE7 350 aa9.46□□□□□ -0.89
HCG18-237ENST00000444126 CENPBP07199 599 aaPredicted RBP9.44□□□□□ -0.9
HCG18-237ENST00000444126 RB1CC1Q8TDY2 1594 aa9.44□□□□□ -0.9
HCG18-237ENST00000444126 SLC4A1APQ9BWU0 796 aaKnown RBP9.42□□□□□ -0.9
HCG18-237ENST00000444126 PODXL2Q9NZ53 605 aa9.42□□□□□ -0.9
HCG18-237ENST00000444126 ATP1B4Q9UN42 357 aaPredicted RBP9.41□□□□□ -0.9
HCG18-237ENST00000444126 NACADO15069 1562 aa9.41□□□□□ -0.9
HCG18-237ENST00000444126 LOC105371045A0A1W2PR82 267 aa9.38□□□□□ -0.91
HCG18-237ENST00000444126 DCAF1Q9Y4B6 1507 aa9.37□□□□□ -0.91
HCG18-237ENST00000444126 EIF5BO60841 1220 aaKnown RBP9.37□□□□□ -0.91
HCG18-237ENST00000444126 HOMEZQ8IX15 550 aa9.37□□□□□ -0.91
HCG18-237ENST00000444126 CSRNP3Q8WYN3 585 aa9.36□□□□□ -0.91
HCG18-237ENST00000444126 BCANQ96GW7 911 aa9.36□□□□□ -0.91
HCG18-237ENST00000444126 CCER1Q8TC90 406 aaPredicted RBP9.35□□□□□ -0.91
HCG18-237ENST00000444126 ZEB1P37275 1124 aaPredicted RBP9.33□□□□□ -0.92
HCG18-237ENST00000444126 PPARGC1BQ86YN6 1023 aaKnown RBP9.29□□□□□ -0.92
HCG18-237ENST00000444126 ARXQ96QS3 562 aa9.27□□□□□ -0.93
HCG18-237ENST00000444126 TIMELESSQ9UNS1 1208 aa9.27□□□□□ -0.93
HCG18-237ENST00000444126 C14orf37Q86TY3 774 aa9.26□□□□□ -0.93
HCG18-237ENST00000444126 TRIM26Q12899 539 aaPredicted RBP9.25□□□□□ -0.93
HCG18-237ENST00000444126 TAOK2Q9UL54 1235 aa9.23□□□□□ -0.93
HCG18-237ENST00000444126 RSF1Q96T23 1441 aaPredicted RBP9.23□□□□□ -0.93
HCG18-237ENST00000444126 PHF23Q9BUL5 403 aaPredicted RBP9.22□□□□□ -0.93
HCG18-237ENST00000444126 YTHDC1Q96MU7 727 aaKnown RBP9.19□□□□□ -0.94
HCG18-237ENST00000444126 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.17□□□□□ -0.94
HCG18-237ENST00000444126 HNRNPUL2Q1KMD3 747 aaKnown RBP9.17□□□□□ -0.94
HCG18-237ENST00000444126 MYO15BQ96JP2 1530 aa9.17□□□□□ -0.94
HCG18-237ENST00000444126 POLR3GLQ9BT43 218 aa9.17□□□□□ -0.94
HCG18-237ENST00000444126 BAZ1AQ9NRL2 1556 aaPredicted RBP9.13□□□□□ -0.95
HCG18-237ENST00000444126 NPM2Q86SE8 214 aaKnown RBP9.12□□□□□ -0.95
HCG18-237ENST00000444126 CECR2Q9BXF3 1484 aa9.12□□□□□ -0.95
HCG18-237ENST00000444126 ITGAEP38570 1179 aa9.11□□□□□ -0.95
HCG18-237ENST00000444126 BAZ1BQ9UIG0 1483 aaKnown RBP9.1□□□□□ -0.95
HCG18-237ENST00000444126 FBLN2P98095 1184 aa9.06□□□□□ -0.96
HCG18-237ENST00000444126 HRCP23327 699 aa9.06□□□□□ -0.96
HCG18-237ENST00000444126 GTF3C3Q9Y5Q9 886 aa9.06□□□□□ -0.96
HCG18-237ENST00000444126 MYT1LQ9UL68 1186 aa9.04□□□□□ -0.96
HCG18-237ENST00000444126 FKBP8Q14318 412 aa9.03□□□□□ -0.96
HCG18-237ENST00000444126 MROH2BQ7Z745 1585 aa9.02□□□□□ -0.97
HCG18-237ENST00000444126 ARID3AQ99856 593 aa9.02□□□□□ -0.97
HCG18-237ENST00000444126 GLIPR1L2Q4G1C9 344 aa9□□□□□ -0.97
HCG18-237ENST00000444126 FAM50AQ14320 339 aaKnown RBP8.99□□□□□ -0.97
HCG18-237ENST00000444126 P3H3Q8IVL6 736 aa8.98□□□□□ -0.97
HCG18-237ENST00000444126 KLHL34Q8N239 644 aa8.98□□□□□ -0.97
HCG18-237ENST00000444126 WRNQ14191 1432 aaPredicted RBP eCLIP8.98□□□□□ -0.97
HCG18-237ENST00000444126 NBR1Q14596 966 aa8.95□□□□□ -0.98
HCG18-237ENST00000444126 SMARCA2P51531 1590 aa8.94□□□□□ -0.98
HCG18-237ENST00000444126 EEA1Q15075 1411 aa8.94□□□□□ -0.98
HCG18-237ENST00000444126 PLCB2Q00722 1185 aa8.93□□□□□ -0.98
HCG18-237ENST00000444126 CCDC88BA6NC98 1476 aa8.91□□□□□ -0.98
HCG18-237ENST00000444126 NEFLP07196 543 aa8.9□□□□□ -0.98
HCG18-237ENST00000444126 CFAP44Q96MT7 982 aa8.9□□□□□ -0.98
HCG18-237ENST00000444126 CDK11BP21127 795 aaKnown RBP8.9□□□□□ -0.99
HCG18-237ENST00000444126 CDK11AQ9UQ88 783 aaPredicted RBP8.9□□□□□ -0.99
HCG18-237ENST00000444126 BCL11AQ9H165 835 aa8.89□□□□□ -0.99
HCG18-237ENST00000444126 ARID3CA6NKF2 412 aa8.89□□□□□ -0.99
HCG18-237ENST00000444126 WIZO95785 1651 aa8.88□□□□□ -0.99
HCG18-237ENST00000444126 TOP2AP11388 1531 aaKnown RBP8.88□□□□□ -0.99
HCG18-237ENST00000444126 KIF27Q86VH2 1401 aa8.87□□□□□ -0.99
HCG18-237ENST00000444126 RTL5Q5HYW3 569 aaPredicted RBP8.87□□□□□ -0.99
HCG18-237ENST00000444126 TRIM52Q96A61 297 aa8.87□□□□□ -0.99
HCG18-237ENST00000444126 GOLGA3Q08378 1498 aa8.86□□□□□ -0.99
HCG18-237ENST00000444126 SMARCA4P51532 1647 aa8.86□□□□□ -0.99
HCG18-237ENST00000444126 ATAD2BQ9ULI0 1458 aa8.85□□□□□ -0.99
HCG18-237ENST00000444126 CHMP7Q8WUX9 453 aaPredicted RBP8.85□□□□□ -0.99
HCG18-237ENST00000444126 CLIP1P30622 1438 aa8.85□□□□□ -0.99
HCG18-237ENST00000444126 ERCC6Q03468 1493 aa8.82□□□□□ -1
HCG18-237ENST00000444126 CEP164Q9UPV0 1460 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms