RNA–Protein interactions for RNA: ENST00000571617.1

P4HB-216, Transcript of prolyl 4-hydroxylase subunit beta, humanhuman

TSL 3

Gene P4HB, Length 505 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
P4HB-216ENST00000571617 NISCHQ9Y2I1 1504 aa51.84■■■■■ 5.89
P4HB-216ENST00000571617 CCDC180Q9P1Z9 1646 aa46.38■■■■■ 5.01
P4HB-216ENST00000571617 ABCC9O60706 1549 aa45.69■■■■■ 4.9
P4HB-216ENST00000571617 RB1CC1Q8TDY2 1594 aa43.83■■■■■ 4.61
P4HB-216ENST00000571617 NACADO15069 1562 aa43.67■■■■■ 4.58
P4HB-216ENST00000571617 DCAF8L2P0C7V8 631 aa43.37■■■■■ 4.53
P4HB-216ENST00000571617 MYO15BQ96JP2 1530 aa43.27■■■■■ 4.52
P4HB-216ENST00000571617 ZCCHC6Q5VYS8 1495 aaKnown RBP43.09■■■■■ 4.49
P4HB-216ENST00000571617 DCAF1Q9Y4B6 1507 aa42.92■■■■■ 4.46
P4HB-216ENST00000571617 UNC13AQ9UPW8 1703 aa42.91■■■■■ 4.46
P4HB-216ENST00000571617 PABPN1Q86U42 306 aaKnown RBP eCLIP42.57■■■■■ 4.41
P4HB-216ENST00000571617 BICRAQ9NZM4 1560 aa42.52■■■■■ 4.4
P4HB-216ENST00000571617 DNAJC5BQ9UF47 199 aa42.33■■■■■ 4.37
P4HB-216ENST00000571617 SCRIBQ14160 1630 aa42.2■■■■■ 4.35
P4HB-216ENST00000571617 SHROOM4Q9ULL8 1493 aa42.05■■■■■ 4.32
P4HB-216ENST00000571617 EIF4G1Q04637 1599 aaKnown RBP41.42■■■■■ 4.22
P4HB-216ENST00000571617 CC2D2AQ9P2K1 1620 aa41.37■■■■■ 4.21
P4HB-216ENST00000571617 CECR2Q9BXF3 1484 aa41.13■■■■■ 4.17
P4HB-216ENST00000571617 SMARCA4P51532 1647 aa40.35■■■■■ 4.05
P4HB-216ENST00000571617 NCAPD3P42695 1498 aa40.26■■■■■ 4.04
P4HB-216ENST00000571617 BAZ1AQ9NRL2 1556 aaPredicted RBP40.23■■■■■ 4.03
P4HB-216ENST00000571617 ATAD2BQ9ULI0 1458 aa40.2■■■■■ 4.03
P4HB-216ENST00000571617 SMARCA2P51531 1590 aa40.18■■■■■ 4.02
P4HB-216ENST00000571617 HMGXB3Q12766 1538 aa40.06■■■■■ 4
P4HB-216ENST00000571617 PEG3Q9GZU2 1588 aa39.99■■■■□ 3.99
P4HB-216ENST00000571617 MROH2BQ7Z745 1585 aa39.93■■■■□ 3.98
P4HB-216ENST00000571617 BAZ1BQ9UIG0 1483 aaKnown RBP39.85■■■■□ 3.97
P4HB-216ENST00000571617 WIZO95785 1651 aa39.51■■■■□ 3.91
P4HB-216ENST00000571617 ERCC6Q03468 1493 aa39.43■■■■□ 3.9
P4HB-216ENST00000571617 NESP48681 1621 aa39.42■■■■□ 3.9
P4HB-216ENST00000571617 LAMC3Q9Y6N6 1575 aa39.31■■■■□ 3.88
P4HB-216ENST00000571617 RSF1Q96T23 1441 aaPredicted RBP39.29■■■■□ 3.88
P4HB-216ENST00000571617 CUX2O14529 1486 aa39.23■■■■□ 3.87
P4HB-216ENST00000571617 TOP2AP11388 1531 aaKnown RBP39.05■■■■□ 3.84
P4HB-216ENST00000571617 CADPSQ9ULU8 1353 aa39.04■■■■□ 3.84
P4HB-216ENST00000571617 PDS5BQ9NTI5 1447 aa39.02■■■■□ 3.84
P4HB-216ENST00000571617 KIF21AQ7Z4S6 1674 aa39.02■■■■□ 3.84
P4HB-216ENST00000571617 THOC2Q8NI27 1593 aaKnown RBP38.99■■■■□ 3.83
P4HB-216ENST00000571617 CFTRP13569 1480 aa38.74■■■■□ 3.79
P4HB-216ENST00000571617 MRC2Q9UBG0 1479 aa38.66■■■■□ 3.78
P4HB-216ENST00000571617 CEP164Q9UPV0 1460 aa38.61■■■■□ 3.77
P4HB-216ENST00000571617 FANCD2Q9BXW9 1451 aa38.6■■■■□ 3.77
P4HB-216ENST00000571617 WDR62O43379 1518 aa38.58■■■■□ 3.77
P4HB-216ENST00000571617 CCDC88BA6NC98 1476 aa38.56■■■■□ 3.76
P4HB-216ENST00000571617 PRDM2Q13029 1718 aa38.54■■■■□ 3.76
P4HB-216ENST00000571617 DNAJC5Q9H3Z4 198 aa38.51■■■■□ 3.76
P4HB-216ENST00000571617 URB2Q14146 1524 aaKnown RBP38.26■■■■□ 3.72
P4HB-216ENST00000571617 TOPBP1Q92547 1522 aa37.95■■■■□ 3.67
P4HB-216ENST00000571617 ABCC8Q09428 1581 aa37.94■■■■□ 3.66
P4HB-216ENST00000571617 DNMBPQ6XZF7 1577 aa37.89■■■■□ 3.66
P4HB-216ENST00000571617 SUPT5HO00267 1087 aaKnown RBP37.86■■■■□ 3.65
P4HB-216ENST00000571617 IFT140Q96RY7 1462 aa37.83■■■■□ 3.65
P4HB-216ENST00000571617 ZNF608Q9ULD9 1512 aaPredicted RBP37.67■■■■□ 3.62
P4HB-216ENST00000571617 TARBP1Q13395 1621 aaKnown RBP37.61■■■■□ 3.61
P4HB-216ENST00000571617 POLA1P09884 1462 aaPredicted RBP37.59■■■■□ 3.61
P4HB-216ENST00000571617 EIF4G3O43432 1585 aaKnown RBP37.55■■■■□ 3.6
P4HB-216ENST00000571617 CUX1P39880 1505 aa37.5■■■■□ 3.59
P4HB-216ENST00000571617 OSCARQ8IYS5 282 aa37.46■■■■□ 3.59
P4HB-216ENST00000571617 FGD5Q6ZNL6 1462 aa37.43■■■■□ 3.58
P4HB-216ENST00000571617 RAD54L2Q9Y4B4 1467 aa37.41■■■■□ 3.58
P4HB-216ENST00000571617 SOGA1O94964 1423 aa37.41■■■■□ 3.58
P4HB-216ENST00000571617 AQRO60306 1485 aaKnown RBP eCLIP37.39■■■■□ 3.582e-7■■■■□ 22.4
P4HB-216ENST00000571617 WDR97A6NE52 1622 aa37.32■■■■□ 3.57
P4HB-216ENST00000571617 TDRD9Q8NDG6 1382 aaKnown RBP37.23■■■■□ 3.55
P4HB-216ENST00000571617 CHD1O14646 1710 aa37.21■■■■□ 3.55
P4HB-216ENST00000571617 BIVM-ERCC5R4GMW8 1640 aa37.1■■■■□ 3.53
P4HB-216ENST00000571617 TOP2BQ02880 1626 aa37.08■■■■□ 3.53
P4HB-216ENST00000571617 ABCA10Q8WWZ4 1543 aa37.06■■■■□ 3.52
P4HB-216ENST00000571617 WRNQ14191 1432 aaPredicted RBP eCLIP37.06■■■■□ 3.52
P4HB-216ENST00000571617 GRIN2BQ13224 1484 aa37.05■■■■□ 3.52
P4HB-216ENST00000571617 SNAPC4Q5SXM2 1469 aa37.05■■■■□ 3.52
P4HB-216ENST00000571617 SYNJ1O43426 1573 aa37.03■■■■□ 3.52
P4HB-216ENST00000571617 MAGI1Q96QZ7 1491 aaPredicted RBP37.02■■■■□ 3.52
P4HB-216ENST00000571617 PBRM1Q86U86 1689 aa37.02■■■■□ 3.52
P4HB-216ENST00000571617 ABCA5Q8WWZ7 1642 aa36.99■■■■□ 3.51
P4HB-216ENST00000571617 GAPVD1Q14C86 1478 aa36.99■■■■□ 3.51
P4HB-216ENST00000571617 FBLN2P98095 1184 aa36.98■■■■□ 3.51
P4HB-216ENST00000571617 TRIM41Q8WV44 630 aa36.98■■■■□ 3.51
P4HB-216ENST00000571617 RIMBP3CA6NJZ7 1639 aa36.98■■■■□ 3.51
P4HB-216ENST00000571617 RIMBP3BA6NNM3 1639 aa36.98■■■■□ 3.51
P4HB-216ENST00000571617 RIMBP3Q9UFD9 1639 aa36.98■■■■□ 3.51
P4HB-216ENST00000571617 ARHGEF11O15085 1522 aa36.9■■■■□ 3.5
P4HB-216ENST00000571617 SYNJ2O15056 1496 aa36.87■■■■□ 3.49
P4HB-216ENST00000571617 CHMP7Q8WUX9 453 aaPredicted RBP36.83■■■■□ 3.49
P4HB-216ENST00000571617 CLASP1Q7Z460 1538 aa36.76■■■■□ 3.48
P4HB-216ENST00000571617 ADAMTS12P58397 1594 aa36.66■■■■□ 3.46
P4HB-216ENST00000571617 ERICH3Q5RHP9 1530 aa36.63■■■■□ 3.45
P4HB-216ENST00000571617 GRIN2AQ12879 1464 aa36.57■■■■□ 3.45
P4HB-216ENST00000571617 ARAP1Q96P48 1450 aa36.56■■■■□ 3.44
P4HB-216ENST00000571617 FHAD1B1AJZ9 1412 aa36.54■■■■□ 3.44
P4HB-216ENST00000571617 CYB5RLQ6IPT4 315 aa36.51■■■■□ 3.44
P4HB-216ENST00000571617 NUP160Q12769 1436 aa36.43■■■■□ 3.42
P4HB-216ENST00000571617 CEP170Q5SW79 1584 aa36.43■■■■□ 3.42
P4HB-216ENST00000571617 KIF27Q86VH2 1401 aa36.33■■■■□ 3.41
P4HB-216ENST00000571617 SHROOM2Q13796 1616 aa36.26■■■■□ 3.4
P4HB-216ENST00000571617 CUL7Q14999 1698 aa36.23■■■■□ 3.39
P4HB-216ENST00000571617 IGF1RP08069 1367 aa36.22■■■■□ 3.39
P4HB-216ENST00000571617 ERCC6L2Q5T890 1561 aa36.19■■■■□ 3.38
P4HB-216ENST00000571617 RUSC2Q8N2Y8 1516 aa36.13■■■■□ 3.37
P4HB-216ENST00000571617 JPH4Q96JJ6 628 aa36.01■■■■□ 3.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms