Protein–RNA interactions for Protein: Q01844

EWSR1, RNA-binding protein EWS, humanhuman

Known RBP eCLIP

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1Q01844 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.762e-6■■■□□ 16.9
EWSR1Q01844 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.13■□□□□ 0.492e-6■■■□□ 16.9
EWSR1Q01844 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC14.28□□□□□ -0.122e-6■■■□□ 16.9
EWSR1Q01844 ATAD3A-201ENST00000339113 2330 ntTSL 214.17□□□□□ -0.142e-6■■■□□ 16.9
EWSR1Q01844 ZNF692-216ENST00000491971 805 ntTSL 29.77□□□□□ -0.852e-8■■■□□ 16.9
EWSR1Q01844 YWHAE-209ENST00000572108 258 ntTSL 37.43□□□□□ -1.222e-8■■■□□ 16.9
EWSR1Q01844 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.162e-6■■■□□ 16.9
EWSR1Q01844 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.242e-6■■■□□ 16.9
EWSR1Q01844 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.342e-6■■■□□ 16.9
EWSR1Q01844 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.362e-6■■■□□ 16.9
EWSR1Q01844 CUX1-201ENST00000292535 13747 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.112e-6■■■□□ 16.9
EWSR1Q01844 UBE2I-208ENST00000473256 1771 ntTSL 213.71□□□□□ -0.221e-6■■■□□ 16.9
EWSR1Q01844 UBE2I-217ENST00000568209 266 ntTSL 513.38□□□□□ -0.271e-6■■■□□ 16.9
EWSR1Q01844 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC14.49□□□□□ -0.094e-15■■■□□ 16.9
EWSR1Q01844 CSPP1-207ENST00000521919 567 ntAPPRIS ALT2 TSL 45.52□□□□□ -1.533e-6■■■□□ 16.9
EWSR1Q01844 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.773e-6■■■□□ 16.9
EWSR1Q01844 CSPP1-204ENST00000519701 569 ntTSL 42.73□□□□□ -1.973e-6■■■□□ 16.9
EWSR1Q01844 CSPP1-202ENST00000519163 3982 ntTSL 22.32□□□□□ -2.043e-6■■■□□ 16.9
EWSR1Q01844 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.014e-6■■■□□ 16.9
EWSR1Q01844 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.274e-6■■■□□ 16.9
EWSR1Q01844 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.414e-6■■■□□ 16.9
EWSR1Q01844 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.564e-6■■■□□ 16.9
EWSR1Q01844 PDE4A-208ENST00000591971 836 ntTSL 59.37□□□□□ -0.914e-6■■■□□ 16.9
EWSR1Q01844 CHID1-214ENST00000528534 321 ntTSL 39.76□□□□□ -0.858e-8■■■□□ 16.9
EWSR1Q01844 AGAP3-214ENST00000476375 1019 ntTSL 510.32□□□□□ -0.767e-7■■■□□ 16.9
EWSR1Q01844 DGKZ-222ENST00000533376 496 ntTSL 518.2■□□□□ 0.55e-6■■■□□ 16.9
EWSR1Q01844 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.385e-6■■■□□ 16.9
EWSR1Q01844 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.295e-6■■■□□ 16.9
EWSR1Q01844 DGKZ-212ENST00000527674 1785 ntTSL 216.83■□□□□ 0.285e-6■■■□□ 16.9
EWSR1Q01844 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.45□□□□□ -0.15e-6■■■□□ 16.9
EWSR1Q01844 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.135e-6■■■□□ 16.9
EWSR1Q01844 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.255e-6■■■□□ 16.9
EWSR1Q01844 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC11.47□□□□□ -0.575e-6■■■□□ 16.9
EWSR1Q01844 DGKZ-208ENST00000524984 3512 ntTSL 211.47□□□□□ -0.575e-6■■■□□ 16.9
EWSR1Q01844 DGKZ-219ENST00000531879 2922 ntTSL 211.28□□□□□ -0.65e-6■■■□□ 16.9
EWSR1Q01844 DGKZ-220ENST00000532868 3118 ntTSL 2 BASIC10.42□□□□□ -0.745e-6■■■□□ 16.9
EWSR1Q01844 DGKZ-209ENST00000525242 542 ntTSL 49.72□□□□□ -0.855e-6■■■□□ 16.9
EWSR1Q01844 SLC19A1-206ENST00000460174 600 ntTSL 310.62□□□□□ -0.712e-7■■■□□ 16.9
EWSR1Q01844 TCF25-211ENST00000563636 721 ntTSL 212.73□□□□□ -0.377e-7■■■□□ 16.9
EWSR1Q01844 MTA1-214ENST00000494026 852 ntTSL 513.09□□□□□ -0.313e-6■■■□□ 16.9
EWSR1Q01844 MTA1-216ENST00000498644 871 ntTSL 212.34□□□□□ -0.433e-6■■■□□ 16.9
EWSR1Q01844 GNB1L-206ENST00000481086 854 ntTSL 314.09□□□□□ -0.151e-6■■■□□ 16.9
EWSR1Q01844 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.743e-7■■■□□ 16.8
EWSR1Q01844 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.693e-7■■■□□ 16.8
EWSR1Q01844 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC19.09■□□□□ 0.653e-7■■■□□ 16.8
EWSR1Q01844 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.573e-7■■■□□ 16.8
EWSR1Q01844 VEGFA-220ENST00000519767 970 ntTSL 1 (best)18.63■□□□□ 0.573e-7■■■□□ 16.8
EWSR1Q01844 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC18.5■□□□□ 0.553e-7■■■□□ 16.8
EWSR1Q01844 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.553e-7■■■□□ 16.8
EWSR1Q01844 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC18.5■□□□□ 0.553e-7■■■□□ 16.8
EWSR1Q01844 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.553e-7■■■□□ 16.8
EWSR1Q01844 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC18.5■□□□□ 0.553e-7■■■□□ 16.8
EWSR1Q01844 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC18.5■□□□□ 0.553e-7■■■□□ 16.8
EWSR1Q01844 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC18.5■□□□□ 0.553e-7■■■□□ 16.8
EWSR1Q01844 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.553e-7■■■□□ 16.8
EWSR1Q01844 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.553e-7■■■□□ 16.8
EWSR1Q01844 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.48■□□□□ 0.393e-7■■■□□ 16.8
EWSR1Q01844 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC15.18■□□□□ 0.023e-7■■■□□ 16.8
EWSR1Q01844 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.13e-7■■■□□ 16.8
EWSR1Q01844 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC13.66□□□□□ -0.223e-7■■■□□ 16.8
EWSR1Q01844 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC9.79□□□□□ -0.843e-7■■■□□ 16.8
EWSR1Q01844 VEGFA-224ENST00000523873 784 ntTSL 1 (best) BASIC9.6□□□□□ -0.873e-7■■■□□ 16.8
EWSR1Q01844 VEGFA-225ENST00000523950 954 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.923e-7■■■□□ 16.8
EWSR1Q01844 VEGFA-210ENST00000457104 414 ntTSL 1 (best) BASIC9.13□□□□□ -0.953e-7■■■□□ 16.8
EWSR1Q01844 VEGFA-218ENST00000518689 630 ntTSL 1 (best) BASIC9.13□□□□□ -0.953e-7■■■□□ 16.8
EWSR1Q01844 VEGFA-223ENST00000523125 541 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.953e-7■■■□□ 16.8
EWSR1Q01844 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC12.64□□□□□ -0.399e-7■■■□□ 16.8
EWSR1Q01844 HNRNPUL1-206ENST00000594207 816 ntTSL 59.43□□□□□ -0.99e-7■■■□□ 16.8
EWSR1Q01844 ANAPC2-203ENST00000483432 793 ntTSL 213.18□□□□□ -0.31e-6■■■□□ 16.8
EWSR1Q01844 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.723e-7■■■□□ 16.8
EWSR1Q01844 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.03■□□□□ 0.483e-7■■■□□ 16.8
EWSR1Q01844 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.073e-7■■■□□ 16.8
EWSR1Q01844 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC14.07□□□□□ -0.163e-7■■■□□ 16.8
EWSR1Q01844 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC13.81□□□□□ -0.23e-7■■■□□ 16.8
EWSR1Q01844 TGIF1-221ENST00000552383 1267 ntTSL 212.37□□□□□ -0.433e-7■■■□□ 16.8
EWSR1Q01844 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC10.98□□□□□ -0.653e-7■■■□□ 16.8
EWSR1Q01844 TGIF1-209ENST00000546979 554 ntTSL 39.9□□□□□ -0.823e-7■■■□□ 16.8
EWSR1Q01844 TGIF1-216ENST00000550958 706 ntTSL 37.28□□□□□ -1.243e-7■■■□□ 16.8
EWSR1Q01844 TGIF1-223ENST00000618001 3030 ntTSL 2 BASIC6.5□□□□□ -1.373e-7■■■□□ 16.8
EWSR1Q01844 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC5.17□□□□□ -1.583e-7■■■□□ 16.8
EWSR1Q01844 TGIF1-215ENST00000549780 801 ntTSL 54.2□□□□□ -1.743e-7■■■□□ 16.8
EWSR1Q01844 TGIF1-212ENST00000549253 563 ntTSL 33.82□□□□□ -1.83e-7■■■□□ 16.8
EWSR1Q01844 CHID1-216ENST00000529539 602 ntTSL 215.62■□□□□ 0.099e-7■■■□□ 16.8
EWSR1Q01844 CHID1-223ENST00000534207 1171 ntTSL 513.8□□□□□ -0.29e-7■■■□□ 16.8
EWSR1Q01844 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.346e-7■■■□□ 16.8
EWSR1Q01844 HERC4-203ENST00000395185 625 ntTSL 46.63□□□□□ -1.356e-7■■■□□ 16.8
EWSR1Q01844 HERC4-214ENST00000513996 944 ntTSL 36.43□□□□□ -1.386e-7■■■□□ 16.8
EWSR1Q01844 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC5.87□□□□□ -1.476e-7■■■□□ 16.8
EWSR1Q01844 HERC4-209ENST00000473533 3593 ntTSL 1 (best)5.35□□□□□ -1.556e-7■■■□□ 16.8
EWSR1Q01844 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.36□□□□□ -1.716e-7■■■□□ 16.8
EWSR1Q01844 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.86e-7■■■□□ 16.8
EWSR1Q01844 GNB1L-204ENST00000453108 702 ntTSL 315.89■□□□□ 0.131e-6■■■□□ 16.8
EWSR1Q01844 AKT1-217ENST00000557494 408 ntTSL 216.13■□□□□ 0.172e-6■■■□□ 16.7
EWSR1Q01844 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC19.18■□□□□ 0.664e-6■■■□□ 16.7
EWSR1Q01844 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.634e-6■■■□□ 16.7
EWSR1Q01844 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.044e-6■■■□□ 16.7
EWSR1Q01844 U2AF2-208ENST00000592874 849 ntTSL 512.47□□□□□ -0.414e-6■■■□□ 16.7
EWSR1Q01844 SSBP3-215ENST00000533946 431 ntTSL 37.19□□□□□ -1.263e-6■■■□□ 16.7
EWSR1Q01844 SLC19A1-208ENST00000468508 1435 ntTSL 212.98□□□□□ -0.331e-7■■■□□ 16.7
EWSR1Q01844 ARF1-211ENST00000490705 881 ntTSL 39.77□□□□□ -0.851e-6■■■□□ 16.7
Retrieved 100 of 7,101 protein–RNA pairs in 39.4 ms