RNA–Protein interactions for RNA: ENST00000550958.5

TGIF1-216, Transcript of TGFB induced factor homeobox 1, humanhuman

TSL 3

Gene TGIF1, Length 706 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGIF1-216ENST00000550958 NISCHQ9Y2I1 1504 aa21.69■■□□□ 1.06
TGIF1-216ENST00000550958 CCDC180Q9P1Z9 1646 aa19.07■□□□□ 0.64
TGIF1-216ENST00000550958 ABCC9O60706 1549 aa18.3■□□□□ 0.52
TGIF1-216ENST00000550958 ZCCHC6Q5VYS8 1495 aaKnown RBP18.14■□□□□ 0.5
TGIF1-216ENST00000550958 DCAF8L2P0C7V8 631 aa18.03■□□□□ 0.48
TGIF1-216ENST00000550958 DCAF1Q9Y4B6 1507 aa17.96■□□□□ 0.47
TGIF1-216ENST00000550958 MYO15BQ96JP2 1530 aa17.88■□□□□ 0.45
TGIF1-216ENST00000550958 NACADO15069 1562 aa17.85■□□□□ 0.45
TGIF1-216ENST00000550958 RB1CC1Q8TDY2 1594 aa17.77■□□□□ 0.44
TGIF1-216ENST00000550958 SCRIBQ14160 1630 aa17.44■□□□□ 0.38
TGIF1-216ENST00000550958 SHROOM4Q9ULL8 1493 aa17.42■□□□□ 0.38
TGIF1-216ENST00000550958 UNC13AQ9UPW8 1703 aa17.35■□□□□ 0.37
TGIF1-216ENST00000550958 BICRAQ9NZM4 1560 aa17.21■□□□□ 0.35
TGIF1-216ENST00000550958 PABPN1Q86U42 306 aaKnown RBP eCLIP17.19■□□□□ 0.34
TGIF1-216ENST00000550958 CECR2Q9BXF3 1484 aa16.86■□□□□ 0.29
TGIF1-216ENST00000550958 BAZ1AQ9NRL2 1556 aaPredicted RBP16.78■□□□□ 0.28
TGIF1-216ENST00000550958 SMARCA4P51532 1647 aa16.73■□□□□ 0.27
TGIF1-216ENST00000550958 EIF4G1Q04637 1599 aaKnown RBP16.72■□□□□ 0.27
TGIF1-216ENST00000550958 MROH2BQ7Z745 1585 aa16.72■□□□□ 0.27
TGIF1-216ENST00000550958 RSF1Q96T23 1441 aaPredicted RBP16.7■□□□□ 0.26
TGIF1-216ENST00000550958 SUPT5HO00267 1087 aaKnown RBP16.64■□□□□ 0.25
TGIF1-216ENST00000550958 WIZO95785 1651 aa16.56■□□□□ 0.24
TGIF1-216ENST00000550958 CC2D2AQ9P2K1 1620 aa16.56■□□□□ 0.24
TGIF1-216ENST00000550958 PEG3Q9GZU2 1588 aa16.55■□□□□ 0.24
TGIF1-216ENST00000550958 ATAD2BQ9ULI0 1458 aa16.54■□□□□ 0.24
TGIF1-216ENST00000550958 SMARCA2P51531 1590 aa16.54■□□□□ 0.24
TGIF1-216ENST00000550958 NCAPD3P42695 1498 aa16.48■□□□□ 0.23
TGIF1-216ENST00000550958 DNAJC5BQ9UF47 199 aa16.44■□□□□ 0.22
TGIF1-216ENST00000550958 BAZ1BQ9UIG0 1483 aaKnown RBP16.43■□□□□ 0.22
TGIF1-216ENST00000550958 HMGXB3Q12766 1538 aa16.41■□□□□ 0.22
TGIF1-216ENST00000550958 TOP2AP11388 1531 aaKnown RBP16.4■□□□□ 0.22
TGIF1-216ENST00000550958 CCDC88BA6NC98 1476 aa16.23■□□□□ 0.19
TGIF1-216ENST00000550958 CADPSQ9ULU8 1353 aa16.03■□□□□ 0.16
TGIF1-216ENST00000550958 CFTRP13569 1480 aa16.01■□□□□ 0.15
TGIF1-216ENST00000550958 LAMC3Q9Y6N6 1575 aa15.96■□□□□ 0.15
TGIF1-216ENST00000550958 NESP48681 1621 aa15.95■□□□□ 0.14
TGIF1-216ENST00000550958 PRDM2Q13029 1718 aa15.88■□□□□ 0.13
TGIF1-216ENST00000550958 PDS5BQ9NTI5 1447 aa15.87■□□□□ 0.13
TGIF1-216ENST00000550958 FANCD2Q9BXW9 1451 aa15.84■□□□□ 0.13
TGIF1-216ENST00000550958 CHIC1Q5VXU3 224 aa15.77■□□□□ 0.12
TGIF1-216ENST00000550958 CEP164Q9UPV0 1460 aa15.77■□□□□ 0.11
TGIF1-216ENST00000550958 ABCC8Q09428 1581 aa15.75■□□□□ 0.11
TGIF1-216ENST00000550958 KIF21AQ7Z4S6 1674 aa15.75■□□□□ 0.11
TGIF1-216ENST00000550958 ERCC6Q03468 1493 aa15.74■□□□□ 0.11
TGIF1-216ENST00000550958 WRNQ14191 1432 aaPredicted RBP eCLIP15.73■□□□□ 0.113e-13■■■■■ 117
TGIF1-216ENST00000550958 TRIM41Q8WV44 630 aa15.69■□□□□ 0.1
TGIF1-216ENST00000550958 MRC2Q9UBG0 1479 aa15.65■□□□□ 0.1
TGIF1-216ENST00000550958 CUX1P39880 1505 aa15.65■□□□□ 0.1
TGIF1-216ENST00000550958 SYNJ1O43426 1573 aa15.64■□□□□ 0.09
TGIF1-216ENST00000550958 URB2Q14146 1524 aaKnown RBP15.63■□□□□ 0.09
TGIF1-216ENST00000550958 DNMBPQ6XZF7 1577 aa15.63■□□□□ 0.09
TGIF1-216ENST00000550958 TOP2BQ02880 1626 aa15.63■□□□□ 0.09
TGIF1-216ENST00000550958 TOPBP1Q92547 1522 aa15.63■□□□□ 0.09
TGIF1-216ENST00000550958 BIVM-ERCC5R4GMW8 1640 aa15.62■□□□□ 0.09
TGIF1-216ENST00000550958 THOC2Q8NI27 1593 aaKnown RBP15.59■□□□□ 0.09
TGIF1-216ENST00000550958 WDR62O43379 1518 aa15.58■□□□□ 0.08
TGIF1-216ENST00000550958 FGD5Q6ZNL6 1462 aa15.54■□□□□ 0.08
TGIF1-216ENST00000550958 POLA1P09884 1462 aaPredicted RBP15.52■□□□□ 0.07
TGIF1-216ENST00000550958 SOGA1O94964 1423 aa15.5■□□□□ 0.07
TGIF1-216ENST00000550958 RAD54L2Q9Y4B4 1467 aa15.46■□□□□ 0.07
TGIF1-216ENST00000550958 CUX2O14529 1486 aa15.46■□□□□ 0.06
TGIF1-216ENST00000550958 IFT140Q96RY7 1462 aa15.43■□□□□ 0.06
TGIF1-216ENST00000550958 ABCA10Q8WWZ4 1543 aa15.42■□□□□ 0.06
TGIF1-216ENST00000550958 TARBP1Q13395 1621 aaKnown RBP15.41■□□□□ 0.06
TGIF1-216ENST00000550958 KIF27Q86VH2 1401 aa15.37■□□□□ 0.05
TGIF1-216ENST00000550958 RUSC2Q8N2Y8 1516 aa15.37■□□□□ 0.05
TGIF1-216ENST00000550958 WDR97A6NE52 1622 aa15.36■□□□□ 0.05
TGIF1-216ENST00000550958 EEA1Q15075 1411 aa15.36■□□□□ 0.05
TGIF1-216ENST00000550958 FAM9AQ8IZU1 332 aaPredicted RBP15.36■□□□□ 0.05
TGIF1-216ENST00000550958 TDRD9Q8NDG6 1382 aaKnown RBP15.36■□□□□ 0.05
TGIF1-216ENST00000550958 ZNF608Q9ULD9 1512 aaPredicted RBP15.32■□□□□ 0.04
TGIF1-216ENST00000550958 CSRNP3Q8WYN3 585 aa15.31■□□□□ 0.04
TGIF1-216ENST00000550958 AQRO60306 1485 aaKnown RBP eCLIP15.3■□□□□ 0.041e-7■■■■■ 26.9
TGIF1-216ENST00000550958 GAPVD1Q14C86 1478 aa15.3■□□□□ 0.04
TGIF1-216ENST00000550958 ABCA5Q8WWZ7 1642 aa15.29■□□□□ 0.04
TGIF1-216ENST00000550958 IGF1RP08069 1367 aa15.27■□□□□ 0.04
TGIF1-216ENST00000550958 EIF4G3O43432 1585 aaKnown RBP15.25■□□□□ 0.03
TGIF1-216ENST00000550958 GRIN2BQ13224 1484 aa15.24■□□□□ 0.03
TGIF1-216ENST00000550958 ERICH3Q5RHP9 1530 aa15.23■□□□□ 0.03
TGIF1-216ENST00000550958 PBRM1Q86U86 1689 aa15.22■□□□□ 0.03
TGIF1-216ENST00000550958 CARMIL1Q5VZK9 1371 aa15.2■□□□□ 0.02
TGIF1-216ENST00000550958 PRXQ9BXM0 1461 aa15.18■□□□□ 0.02
TGIF1-216ENST00000550958 CUL7Q14999 1698 aa15.16■□□□□ 0.02
TGIF1-216ENST00000550958 SNAPC4Q5SXM2 1469 aa15.15■□□□□ 0.02
TGIF1-216ENST00000550958 MAGI1Q96QZ7 1491 aaPredicted RBP15.14■□□□□ 0.01
TGIF1-216ENST00000550958 FHAD1B1AJZ9 1412 aa15.14■□□□□ 0.01
TGIF1-216ENST00000550958 RAPGEF2Q9Y4G8 1499 aa15.14■□□□□ 0.01
TGIF1-216ENST00000550958 KIF21BO75037 1637 aa15.14■□□□□ 0.01
TGIF1-216ENST00000550958 LOC105371045A0A1W2PR82 267 aa15.13■□□□□ 0.01
TGIF1-216ENST00000550958 EHMT2Q96KQ7 1210 aa15.12■□□□□ 0.01
TGIF1-216ENST00000550958 ADAMTS12P58397 1594 aa15.11■□□□□ 0.01
TGIF1-216ENST00000550958 GOLGA3Q08378 1498 aa15.11■□□□□ 0.01
TGIF1-216ENST00000550958 CHMP7Q8WUX9 453 aaPredicted RBP15.09■□□□□ 0.01
TGIF1-216ENST00000550958 SYNJ2O15056 1496 aa15.08■□□□□ 0.01
TGIF1-216ENST00000550958 UBTFP17480 764 aaKnown RBP15.08■□□□□ 0
TGIF1-216ENST00000550958 FBLN2P98095 1184 aa15.07■□□□□ 0
TGIF1-216ENST00000550958 GRIN2AQ12879 1464 aa15.04■□□□□ -0
TGIF1-216ENST00000550958 TNIKQ9UKE5 1360 aa15.01□□□□□ -0.01
TGIF1-216ENST00000550958 CHD1O14646 1710 aa14.98□□□□□ -0.01
TGIF1-216ENST00000550958 NUP160Q12769 1436 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms