RNA–Protein interactions for RNA: ENST00000468508.1

SLC19A1-208, Transcript of solute carrier family 19 member 1, humanhuman

TSL 2

Gene SLC19A1, Length 1,435 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC19A1-208ENST00000468508 NISCHQ9Y2I1 1504 aa43.6■■■■■ 4.57
SLC19A1-208ENST00000468508 CCDC180Q9P1Z9 1646 aa39.03■■■■□ 3.84
SLC19A1-208ENST00000468508 ABCC9O60706 1549 aa38.76■■■■□ 3.8
SLC19A1-208ENST00000468508 RB1CC1Q8TDY2 1594 aa37.01■■■■□ 3.51
SLC19A1-208ENST00000468508 NACADO15069 1562 aa36.79■■■■□ 3.48
SLC19A1-208ENST00000468508 DCAF8L2P0C7V8 631 aa36.74■■■■□ 3.47
SLC19A1-208ENST00000468508 MYO15BQ96JP2 1530 aa36.31■■■■□ 3.4
SLC19A1-208ENST00000468508 UNC13AQ9UPW8 1703 aa36.25■■■■□ 3.39
SLC19A1-208ENST00000468508 ZCCHC6Q5VYS8 1495 aaKnown RBP36.2■■■■□ 3.38
SLC19A1-208ENST00000468508 PABPN1Q86U42 306 aaKnown RBP eCLIP36.12■■■■□ 3.37
SLC19A1-208ENST00000468508 DNAJC5BQ9UF47 199 aa36.03■■■■□ 3.36
SLC19A1-208ENST00000468508 DCAF1Q9Y4B6 1507 aa35.98■■■■□ 3.35
SLC19A1-208ENST00000468508 BICRAQ9NZM4 1560 aa35.9■■■■□ 3.34
SLC19A1-208ENST00000468508 SCRIBQ14160 1630 aa35.64■■■■□ 3.3
SLC19A1-208ENST00000468508 SHROOM4Q9ULL8 1493 aa35.38■■■■□ 3.25
SLC19A1-208ENST00000468508 CC2D2AQ9P2K1 1620 aa35.02■■■■□ 3.2
SLC19A1-208ENST00000468508 EIF4G1Q04637 1599 aaKnown RBP35.01■■■■□ 3.19
SLC19A1-208ENST00000468508 CECR2Q9BXF3 1484 aa34.86■■■■□ 3.17
SLC19A1-208ENST00000468508 SMARCA4P51532 1647 aa33.99■■■■□ 3.03
SLC19A1-208ENST00000468508 NCAPD3P42695 1498 aa33.92■■■■□ 3.02
SLC19A1-208ENST00000468508 ATAD2BQ9ULI0 1458 aa33.89■■■■□ 3.02
SLC19A1-208ENST00000468508 SMARCA2P51531 1590 aa33.84■■■■□ 3.01
SLC19A1-208ENST00000468508 BAZ1AQ9NRL2 1556 aaPredicted RBP33.83■■■■□ 3.01
SLC19A1-208ENST00000468508 HMGXB3Q12766 1538 aa33.74■■■□□ 2.99
SLC19A1-208ENST00000468508 MROH2BQ7Z745 1585 aa33.62■■■□□ 2.97
SLC19A1-208ENST00000468508 BAZ1BQ9UIG0 1483 aaKnown RBP33.62■■■□□ 2.97
SLC19A1-208ENST00000468508 PEG3Q9GZU2 1588 aa33.59■■■□□ 2.97
SLC19A1-208ENST00000468508 ERCC6Q03468 1493 aa33.46■■■□□ 2.95
SLC19A1-208ENST00000468508 NESP48681 1621 aa33.38■■■□□ 2.93
SLC19A1-208ENST00000468508 WIZO95785 1651 aa33.28■■■□□ 2.92
SLC19A1-208ENST00000468508 CUX2O14529 1486 aa33.23■■■□□ 2.91
SLC19A1-208ENST00000468508 LAMC3Q9Y6N6 1575 aa33.17■■■□□ 2.9
SLC19A1-208ENST00000468508 KIF21AQ7Z4S6 1674 aa33.01■■■□□ 2.88
SLC19A1-208ENST00000468508 RSF1Q96T23 1441 aaPredicted RBP33■■■□□ 2.87
SLC19A1-208ENST00000468508 THOC2Q8NI27 1593 aaKnown RBP32.99■■■□□ 2.87
SLC19A1-208ENST00000468508 PDS5BQ9NTI5 1447 aa32.93■■■□□ 2.86
SLC19A1-208ENST00000468508 CADPSQ9ULU8 1353 aa32.92■■■□□ 2.86
SLC19A1-208ENST00000468508 DNAJC5Q9H3Z4 198 aa32.85■■■□□ 2.85
SLC19A1-208ENST00000468508 TOP2AP11388 1531 aaKnown RBP32.84■■■□□ 2.85
SLC19A1-208ENST00000468508 MRC2Q9UBG0 1479 aa32.67■■■□□ 2.82
SLC19A1-208ENST00000468508 CEP164Q9UPV0 1460 aa32.62■■■□□ 2.81
SLC19A1-208ENST00000468508 CFTRP13569 1480 aa32.61■■■□□ 2.81
SLC19A1-208ENST00000468508 FANCD2Q9BXW9 1451 aa32.59■■■□□ 2.81
SLC19A1-208ENST00000468508 WDR62O43379 1518 aa32.57■■■□□ 2.8
SLC19A1-208ENST00000468508 CCDC88BA6NC98 1476 aa32.44■■■□□ 2.78
SLC19A1-208ENST00000468508 PRDM2Q13029 1718 aa32.44■■■□□ 2.78
SLC19A1-208ENST00000468508 URB2Q14146 1524 aaKnown RBP32.31■■■□□ 2.76
SLC19A1-208ENST00000468508 TOPBP1Q92547 1522 aa32.01■■■□□ 2.71
SLC19A1-208ENST00000468508 DNMBPQ6XZF7 1577 aa31.93■■■□□ 2.7
SLC19A1-208ENST00000468508 ABCC8Q09428 1581 aa31.92■■■□□ 2.7
SLC19A1-208ENST00000468508 IFT140Q96RY7 1462 aa31.92■■■□□ 2.7
SLC19A1-208ENST00000468508 ZNF608Q9ULD9 1512 aaPredicted RBP31.87■■■□□ 2.69
SLC19A1-208ENST00000468508 SUPT5HO00267 1087 aaKnown RBP31.83■■■□□ 2.69
SLC19A1-208ENST00000468508 OSCARQ8IYS5 282 aa31.75■■■□□ 2.67
SLC19A1-208ENST00000468508 EIF4G3O43432 1585 aaKnown RBP31.74■■■□□ 2.67
SLC19A1-208ENST00000468508 TARBP1Q13395 1621 aaKnown RBP31.71■■■□□ 2.67
SLC19A1-208ENST00000468508 POLA1P09884 1462 aaPredicted RBP31.69■■■□□ 2.66
SLC19A1-208ENST00000468508 TRIM41Q8WV44 630 aa31.64■■■□□ 2.66
SLC19A1-208ENST00000468508 AQRO60306 1485 aaKnown RBP eCLIP31.61■■■□□ 2.65
SLC19A1-208ENST00000468508 RAD54L2Q9Y4B4 1467 aa31.59■■■□□ 2.65
SLC19A1-208ENST00000468508 CUX1P39880 1505 aa31.58■■■□□ 2.65
SLC19A1-208ENST00000468508 FGD5Q6ZNL6 1462 aa31.56■■■□□ 2.64
SLC19A1-208ENST00000468508 SOGA1O94964 1423 aa31.55■■■□□ 2.64
SLC19A1-208ENST00000468508 CHD1O14646 1710 aa31.49■■■□□ 2.63
SLC19A1-208ENST00000468508 TDRD9Q8NDG6 1382 aaKnown RBP31.46■■■□□ 2.63
SLC19A1-208ENST00000468508 RIMBP3CA6NJZ7 1639 aa31.39■■■□□ 2.62
SLC19A1-208ENST00000468508 RIMBP3BA6NNM3 1639 aa31.39■■■□□ 2.62
SLC19A1-208ENST00000468508 RIMBP3Q9UFD9 1639 aa31.39■■■□□ 2.62
SLC19A1-208ENST00000468508 FBLN2P98095 1184 aa31.38■■■□□ 2.61
SLC19A1-208ENST00000468508 WDR97A6NE52 1622 aa31.37■■■□□ 2.61
SLC19A1-208ENST00000468508 SNAPC4Q5SXM2 1469 aa31.32■■■□□ 2.6
SLC19A1-208ENST00000468508 ARHGEF11O15085 1522 aa31.28■■■□□ 2.6
SLC19A1-208ENST00000468508 GRIN2BQ13224 1484 aa31.25■■■□□ 2.59
SLC19A1-208ENST00000468508 PBRM1Q86U86 1689 aa31.23■■■□□ 2.59
SLC19A1-208ENST00000468508 MAGI1Q96QZ7 1491 aaPredicted RBP31.22■■■□□ 2.59
SLC19A1-208ENST00000468508 GAPVD1Q14C86 1478 aa31.18■■■□□ 2.58
SLC19A1-208ENST00000468508 ABCA10Q8WWZ4 1543 aa31.18■■■□□ 2.58
SLC19A1-208ENST00000468508 BIVM-ERCC5R4GMW8 1640 aa31.17■■■□□ 2.58
SLC19A1-208ENST00000468508 CHMP7Q8WUX9 453 aaPredicted RBP31.15■■■□□ 2.58
SLC19A1-208ENST00000468508 TOP2BQ02880 1626 aa31.15■■■□□ 2.58
SLC19A1-208ENST00000468508 ABCA5Q8WWZ7 1642 aa31.15■■■□□ 2.58
SLC19A1-208ENST00000468508 SYNJ1O43426 1573 aa31.15■■■□□ 2.58
SLC19A1-208ENST00000468508 WRNQ14191 1432 aaPredicted RBP eCLIP31.14■■■□□ 2.58
SLC19A1-208ENST00000468508 SYNJ2O15056 1496 aa31.11■■■□□ 2.57
SLC19A1-208ENST00000468508 CLASP1Q7Z460 1538 aa31.05■■■□□ 2.56
SLC19A1-208ENST00000468508 CYB5RLQ6IPT4 315 aa31.04■■■□□ 2.56
SLC19A1-208ENST00000468508 ARAP1Q96P48 1450 aa31■■■□□ 2.55
SLC19A1-208ENST00000468508 ADAMTS12P58397 1594 aa30.91■■■□□ 2.54
SLC19A1-208ENST00000468508 GRIN2AQ12879 1464 aa30.85■■■□□ 2.53
SLC19A1-208ENST00000468508 ERICH3Q5RHP9 1530 aa30.81■■■□□ 2.52
SLC19A1-208ENST00000468508 FHAD1B1AJZ9 1412 aa30.78■■■□□ 2.52
SLC19A1-208ENST00000468508 CEP170Q5SW79 1584 aa30.75■■■□□ 2.51
SLC19A1-208ENST00000468508 NUP160Q12769 1436 aa30.71■■■□□ 2.51
SLC19A1-208ENST00000468508 ERCC6L2Q5T890 1561 aa30.63■■■□□ 2.49
SLC19A1-208ENST00000468508 TRHP20396 242 aaPredicted RBP30.63■■■□□ 2.49
SLC19A1-208ENST00000468508 SHROOM2Q13796 1616 aa30.57■■■□□ 2.48
SLC19A1-208ENST00000468508 KIF27Q86VH2 1401 aa30.53■■■□□ 2.48
SLC19A1-208ENST00000468508 RUSC2Q8N2Y8 1516 aa30.46■■■□□ 2.47
SLC19A1-208ENST00000468508 CUL7Q14999 1698 aa30.46■■■□□ 2.47
SLC19A1-208ENST00000468508 IGF1RP08069 1367 aa30.45■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms