RNA–Protein interactions for RNA: ENST00000549253.5

TGIF1-212, Transcript of TGFB induced factor homeobox 1, humanhuman

TSL 3

Gene TGIF1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGIF1-212ENST00000549253 NISCHQ9Y2I1 1504 aa12.65□□□□□ -0.38
TGIF1-212ENST00000549253 DNAJC5BQ9UF47 199 aa11.58□□□□□ -0.56
TGIF1-212ENST00000549253 DNAJC5Q9H3Z4 198 aa11.56□□□□□ -0.56
TGIF1-212ENST00000549253 ABCC9O60706 1549 aa11.49□□□□□ -0.57
TGIF1-212ENST00000549253 CCDC180Q9P1Z9 1646 aa11.16□□□□□ -0.62
TGIF1-212ENST00000549253 RB1CC1Q8TDY2 1594 aa10.58□□□□□ -0.72
TGIF1-212ENST00000549253 PABPN1Q86U42 306 aaKnown RBP eCLIP10.57□□□□□ -0.72
TGIF1-212ENST00000549253 ZCCHC6Q5VYS8 1495 aaKnown RBP10.56□□□□□ -0.72
TGIF1-212ENST00000549253 TRIM41Q8WV44 630 aa10.55□□□□□ -0.72
TGIF1-212ENST00000549253 NACADO15069 1562 aa10.49□□□□□ -0.73
TGIF1-212ENST00000549253 DCAF8L2P0C7V8 631 aa10.46□□□□□ -0.73
TGIF1-212ENST00000549253 MYO15BQ96JP2 1530 aa10.45□□□□□ -0.74
TGIF1-212ENST00000549253 DCAF1Q9Y4B6 1507 aa10.43□□□□□ -0.74
TGIF1-212ENST00000549253 UNC13AQ9UPW8 1703 aa10.42□□□□□ -0.74
TGIF1-212ENST00000549253 CECR2Q9BXF3 1484 aa10.42□□□□□ -0.74
TGIF1-212ENST00000549253 CC2D2AQ9P2K1 1620 aa10.35□□□□□ -0.75
TGIF1-212ENST00000549253 BICRAQ9NZM4 1560 aa10.34□□□□□ -0.75
TGIF1-212ENST00000549253 AEBP2Q6ZN18 517 aaPredicted RBP10.28□□□□□ -0.76
TGIF1-212ENST00000549253 SCRIBQ14160 1630 aa10.26□□□□□ -0.77
TGIF1-212ENST00000549253 ILDR1Q86SU0 546 aaPredicted RBP10.24□□□□□ -0.77
TGIF1-212ENST00000549253 CUX2O14529 1486 aa10.2□□□□□ -0.78
TGIF1-212ENST00000549253 EIF4G1Q04637 1599 aaKnown RBP10.12□□□□□ -0.79
TGIF1-212ENST00000549253 SHROOM4Q9ULL8 1493 aa10.05□□□□□ -0.8
TGIF1-212ENST00000549253 ERCC6Q03468 1493 aa9.95□□□□□ -0.82
TGIF1-212ENST00000549253 MROH2BQ7Z745 1585 aa9.8□□□□□ -0.84
TGIF1-212ENST00000549253 SMARCA4P51532 1647 aa9.8□□□□□ -0.84
TGIF1-212ENST00000549253 ATAD2BQ9ULI0 1458 aa9.77□□□□□ -0.85
TGIF1-212ENST00000549253 NCAPD3P42695 1498 aa9.74□□□□□ -0.85
TGIF1-212ENST00000549253 BAZ1AQ9NRL2 1556 aaPredicted RBP9.74□□□□□ -0.85
TGIF1-212ENST00000549253 THOC2Q8NI27 1593 aaKnown RBP9.71□□□□□ -0.86
TGIF1-212ENST00000549253 PEG3Q9GZU2 1588 aa9.71□□□□□ -0.86
TGIF1-212ENST00000549253 RSF1Q96T23 1441 aaPredicted RBP9.68□□□□□ -0.86
TGIF1-212ENST00000549253 WIZO95785 1651 aa9.67□□□□□ -0.86
TGIF1-212ENST00000549253 SMARCA2P51531 1590 aa9.67□□□□□ -0.86
TGIF1-212ENST00000549253 HMGXB3Q12766 1538 aa9.66□□□□□ -0.86
TGIF1-212ENST00000549253 NESP48681 1621 aa9.65□□□□□ -0.86
TGIF1-212ENST00000549253 BAZ1BQ9UIG0 1483 aaKnown RBP9.62□□□□□ -0.87
TGIF1-212ENST00000549253 TRHP20396 242 aaPredicted RBP9.62□□□□□ -0.87
TGIF1-212ENST00000549253 OSCARQ8IYS5 282 aa9.62□□□□□ -0.87
TGIF1-212ENST00000549253 RIMBP3CA6NJZ7 1639 aa9.61□□□□□ -0.87
TGIF1-212ENST00000549253 RIMBP3BA6NNM3 1639 aa9.61□□□□□ -0.87
TGIF1-212ENST00000549253 RIMBP3Q9UFD9 1639 aa9.61□□□□□ -0.87
TGIF1-212ENST00000549253 LMTK3Q96Q04 1460 aa9.57□□□□□ -0.88
TGIF1-212ENST00000549253 SOCS7O14512 581 aa9.55□□□□□ -0.88
TGIF1-212ENST00000549253 TOP2AP11388 1531 aaKnown RBP9.53□□□□□ -0.88
TGIF1-212ENST00000549253 KIF21AQ7Z4S6 1674 aa9.53□□□□□ -0.88
TGIF1-212ENST00000549253 ARHGEF11O15085 1522 aa9.46□□□□□ -0.89
TGIF1-212ENST00000549253 CYB5RLQ6IPT4 315 aa9.46□□□□□ -0.9
TGIF1-212ENST00000549253 CCDC88BA6NC98 1476 aa9.46□□□□□ -0.9
TGIF1-212ENST00000549253 ILDR2Q71H61 639 aa9.45□□□□□ -0.9
TGIF1-212ENST00000549253 LAMC3Q9Y6N6 1575 aa9.45□□□□□ -0.9
TGIF1-212ENST00000549253 CADPSQ9ULU8 1353 aa9.44□□□□□ -0.9
TGIF1-212ENST00000549253 CFTRP13569 1480 aa9.41□□□□□ -0.9
TGIF1-212ENST00000549253 PDS5BQ9NTI5 1447 aa9.39□□□□□ -0.91
TGIF1-212ENST00000549253 WDR62O43379 1518 aa9.37□□□□□ -0.91
TGIF1-212ENST00000549253 MRC2Q9UBG0 1479 aa9.36□□□□□ -0.91
TGIF1-212ENST00000549253 SUPT5HO00267 1087 aaKnown RBP9.36□□□□□ -0.91
TGIF1-212ENST00000549253 FANCD2Q9BXW9 1451 aa9.34□□□□□ -0.91
TGIF1-212ENST00000549253 ARAP1Q96P48 1450 aa9.32□□□□□ -0.92
TGIF1-212ENST00000549253 URB2Q14146 1524 aaKnown RBP9.31□□□□□ -0.92
TGIF1-212ENST00000549253 FBXO41Q8TF61 875 aa9.3□□□□□ -0.92
TGIF1-212ENST00000549253 CEP164Q9UPV0 1460 aa9.28□□□□□ -0.92
TGIF1-212ENST00000549253 PRDM2Q13029 1718 aa9.23□□□□□ -0.93
TGIF1-212ENST00000549253 TOPBP1Q92547 1522 aa9.21□□□□□ -0.94
TGIF1-212ENST00000549253 ERCC6L2Q5T890 1561 aa9.2□□□□□ -0.94
TGIF1-212ENST00000549253 DISP3Q9P2K9 1392 aa9.2□□□□□ -0.94
TGIF1-212ENST00000549253 CUX1P39880 1505 aa9.19□□□□□ -0.94
TGIF1-212ENST00000549253 ZNF608Q9ULD9 1512 aaPredicted RBP9.18□□□□□ -0.94
TGIF1-212ENST00000549253 DNMBPQ6XZF7 1577 aa9.16□□□□□ -0.94
TGIF1-212ENST00000549253 KDM4FA0A1W2PPD8 638 aa9.15□□□□□ -0.94
TGIF1-212ENST00000549253 POLA1P09884 1462 aaPredicted RBP9.15□□□□□ -0.95
TGIF1-212ENST00000549253 RAD54L2Q9Y4B4 1467 aa9.14□□□□□ -0.95
TGIF1-212ENST00000549253 CHD1O14646 1710 aa9.14□□□□□ -0.95
TGIF1-212ENST00000549253 TARBP1Q13395 1621 aaKnown RBP9.13□□□□□ -0.95
TGIF1-212ENST00000549253 ABCC8Q09428 1581 aa9.13□□□□□ -0.95
TGIF1-212ENST00000549253 SYNJ1O43426 1573 aa9.12□□□□□ -0.95
TGIF1-212ENST00000549253 FGD5Q6ZNL6 1462 aa9.11□□□□□ -0.95
TGIF1-212ENST00000549253 IFT140Q96RY7 1462 aa9.1□□□□□ -0.95
TGIF1-212ENST00000549253 AQRO60306 1485 aaKnown RBP eCLIP9.08□□□□□ -0.961e-7■■■■■ 26.9
TGIF1-212ENST00000549253 HECW2Q9P2P5 1572 aa9.08□□□□□ -0.96
TGIF1-212ENST00000549253 EIF4G3O43432 1585 aaKnown RBP9.07□□□□□ -0.96
TGIF1-212ENST00000549253 TDRD9Q8NDG6 1382 aaKnown RBP9.05□□□□□ -0.96
TGIF1-212ENST00000549253 WDR97A6NE52 1622 aa9.05□□□□□ -0.96
TGIF1-212ENST00000549253 TOP2BQ02880 1626 aa9.05□□□□□ -0.96
TGIF1-212ENST00000549253 SOGA1O94964 1423 aa9.05□□□□□ -0.96
TGIF1-212ENST00000549253 WRNQ14191 1432 aaPredicted RBP eCLIP9.05□□□□□ -0.963e-13■■■■■ 117
TGIF1-212ENST00000549253 BIVM-ERCC5R4GMW8 1640 aa9.04□□□□□ -0.96
TGIF1-212ENST00000549253 FBLN2P98095 1184 aa9.02□□□□□ -0.97
TGIF1-212ENST00000549253 KIF13AQ9H1H9 1805 aa9.01□□□□□ -0.97
TGIF1-212ENST00000549253 ABCA10Q8WWZ4 1543 aa9□□□□□ -0.97
TGIF1-212ENST00000549253 SPATA31D1Q6ZQQ2 1576 aa9□□□□□ -0.97
TGIF1-212ENST00000549253 ABCA5Q8WWZ7 1642 aa8.99□□□□□ -0.97
TGIF1-212ENST00000549253 SNAPC4Q5SXM2 1469 aa8.98□□□□□ -0.97
TGIF1-212ENST00000549253 CLASP1Q7Z460 1538 aa8.96□□□□□ -0.97
TGIF1-212ENST00000549253 GAPVD1Q14C86 1478 aa8.95□□□□□ -0.98
TGIF1-212ENST00000549253 GRIN2BQ13224 1484 aa8.94□□□□□ -0.98
TGIF1-212ENST00000549253 PBRM1Q86U86 1689 aa8.91□□□□□ -0.98
TGIF1-212ENST00000549253 RUSC2Q8N2Y8 1516 aa8.91□□□□□ -0.98
TGIF1-212ENST00000549253 ADAMTS12P58397 1594 aa8.9□□□□□ -0.98
TGIF1-212ENST00000549253 MAGI1Q96QZ7 1491 aaPredicted RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms