RNA–Protein interactions for RNA: ENST00000548489.6

TGIF1-211, Transcript of TGFB induced factor homeobox 1, humanhuman

TSL 3 BASIC

Gene TGIF1, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGIF1-211ENST00000548489 AEBP2Q6ZN18 517 aaPredicted RBP28.13■■■□□ 2.09
TGIF1-211ENST00000548489 CHIC1Q5VXU3 224 aa27.3■■□□□ 1.96
TGIF1-211ENST00000548489 PHF23Q9BUL5 403 aaPredicted RBP24.06■■□□□ 1.44
TGIF1-211ENST00000548489 SENP3Q9H4L4 574 aaPredicted RBP23.78■■□□□ 1.4
TGIF1-211ENST00000548489 FOXD1Q16676 465 aa22.15■■□□□ 1.14
TGIF1-211ENST00000548489 PLPPR3Q6T4P5 718 aa22.07■■□□□ 1.12
TGIF1-211ENST00000548489 PPP6R1Q9UPN7 881 aa21.26■□□□□ 0.99
TGIF1-211ENST00000548489 ADRA2BP18089 450 aa21.22■□□□□ 0.99
TGIF1-211ENST00000548489 PIAS4Q8N2W9 510 aaPredicted RBP20.83■□□□□ 0.92
TGIF1-211ENST00000548489 MSH5O43196 834 aa20.37■□□□□ 0.85
TGIF1-211ENST00000548489 PPP4R3CPQ6ZMV5 832 aa19.47■□□□□ 0.71
TGIF1-211ENST00000548489 MAPK8IP2Q13387 824 aaPredicted RBP19.3■□□□□ 0.68
TGIF1-211ENST00000548489 SCAF1Q9H7N4 1312 aaKnown RBP19.26■□□□□ 0.67
TGIF1-211ENST00000548489 DMRT2Q9Y5R5 561 aa19■□□□□ 0.63
TGIF1-211ENST00000548489 KCNA4P22459 653 aa18.95■□□□□ 0.62
TGIF1-211ENST00000548489 CNKSR2Q8WXI2 1034 aa18.91■□□□□ 0.62
TGIF1-211ENST00000548489 NCBP3Q53F19 620 aaKnown RBP18.84■□□□□ 0.61
TGIF1-211ENST00000548489 POTEDQ86YR6 584 aa18.82■□□□□ 0.6
TGIF1-211ENST00000548489 NPM3O75607 178 aaKnown RBP18.69■□□□□ 0.58
TGIF1-211ENST00000548489 RNF216Q9NWF9 866 aaPredicted RBP18.58■□□□□ 0.56
TGIF1-211ENST00000548489 HOXD11P31277 338 aaPredicted RBP18.56■□□□□ 0.56
TGIF1-211ENST00000548489 DCAF8L1A6NGE4 600 aa18.14■□□□□ 0.49
TGIF1-211ENST00000548489 DNAJC5BQ9UF47 199 aa18.12■□□□□ 0.49
TGIF1-211ENST00000548489 SLC4A1APQ9BWU0 796 aaKnown RBP17.97■□□□□ 0.47
TGIF1-211ENST00000548489 SLC4A2P04920 1241 aa17.7■□□□□ 0.42
TGIF1-211ENST00000548489 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.64■□□□□ 0.416e-7■■■■□ 22.8
TGIF1-211ENST00000548489 RNF39Q9H2S5 420 aa17.52■□□□□ 0.39
TGIF1-211ENST00000548489 ZBTB22O15209 634 aa17.49■□□□□ 0.39
TGIF1-211ENST00000548489 U3KPZ7 1027 aaPredicted RBP17.43■□□□□ 0.38
TGIF1-211ENST00000548489 FOXD4L1Q9NU39 408 aa17.42■□□□□ 0.38
TGIF1-211ENST00000548489 EHMT2Q96KQ7 1210 aa17.37■□□□□ 0.37
TGIF1-211ENST00000548489 CSRNP3Q8WYN3 585 aa17.25■□□□□ 0.35
TGIF1-211ENST00000548489 C1QBPQ07021 282 aaKnown RBP17.24■□□□□ 0.35
TGIF1-211ENST00000548489 MYCNP04198 464 aaPredicted RBP17.21■□□□□ 0.35
TGIF1-211ENST00000548489 CACNB1Q02641 598 aaPredicted RBP17.08■□□□□ 0.32
TGIF1-211ENST00000548489 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.03■□□□□ 0.32
TGIF1-211ENST00000548489 HNRNPUL2Q1KMD3 747 aaKnown RBP17.03■□□□□ 0.32
TGIF1-211ENST00000548489 SAMD1Q6SPF0 538 aaPredicted RBP17.01■□□□□ 0.31
TGIF1-211ENST00000548489 SPINK5Q9NQ38 1064 aaPredicted RBP16.98■□□□□ 0.31
TGIF1-211ENST00000548489 APLP2Q06481 763 aa16.86■□□□□ 0.29
TGIF1-211ENST00000548489 ATF5Q9Y2D1 282 aaPredicted RBP16.86■□□□□ 0.29
TGIF1-211ENST00000548489 CAPN15O75808 1086 aa16.85■□□□□ 0.29
TGIF1-211ENST00000548489 ATXN8OSP0DMR3 200 aa16.78■□□□□ 0.28
TGIF1-211ENST00000548489 TRHP20396 242 aaPredicted RBP16.75■□□□□ 0.27
TGIF1-211ENST00000548489 ZNF219Q9P2Y4 722 aaPredicted RBP16.71■□□□□ 0.27
TGIF1-211ENST00000548489 DSG3P32926 999 aa16.63■□□□□ 0.25
TGIF1-211ENST00000548489 ABCB7O75027 752 aa16.57■□□□□ 0.24
TGIF1-211ENST00000548489 POLA2Q14181 598 aa16.46■□□□□ 0.23
TGIF1-211ENST00000548489 MKRN4PQ13434 485 aaPredicted RBP16.12■□□□□ 0.17
TGIF1-211ENST00000548489 ZBTB12Q9Y330 459 aaPredicted RBP16.11■□□□□ 0.17
TGIF1-211ENST00000548489 FBLN2P98095 1184 aa16.01■□□□□ 0.15
TGIF1-211ENST00000548489 OSCARQ8IYS5 282 aa15.95■□□□□ 0.14
TGIF1-211ENST00000548489 RBM42Q9BTD8 480 aaKnown RBP15.77■□□□□ 0.11
TGIF1-211ENST00000548489 SPDYE2BA6NHP3 402 aa15.71■□□□□ 0.11
TGIF1-211ENST00000548489 SPDYE6P0CI01 402 aa15.71■□□□□ 0.11
TGIF1-211ENST00000548489 SPDYE2Q495Y8 402 aa15.71■□□□□ 0.11
TGIF1-211ENST00000548489 ZNF692Q9BU19 519 aaPredicted RBP15.63■□□□□ 0.09
TGIF1-211ENST00000548489 SSUH2Q9Y2M2 353 aa15.63■□□□□ 0.09
TGIF1-211ENST00000548489 SPDYE4A6NLX3 237 aa15.62■□□□□ 0.09
TGIF1-211ENST00000548489 AKT1S1Q96B36 256 aa15.58■□□□□ 0.08
TGIF1-211ENST00000548489 FKBP8Q14318 412 aa15.56■□□□□ 0.08
TGIF1-211ENST00000548489 REM2Q8IYK8 340 aaPredicted RBP15.47■□□□□ 0.07
TGIF1-211ENST00000548489 PABPN1Q86U42 306 aaKnown RBP eCLIP15.45■□□□□ 0.06
TGIF1-211ENST00000548489 PROM2Q8N271 834 aa15.4■□□□□ 0.06
TGIF1-211ENST00000548489 NISCHQ9Y2I1 1504 aa15.36■□□□□ 0.05
TGIF1-211ENST00000548489 PITPNM1O00562 1244 aa15.32■□□□□ 0.04
TGIF1-211ENST00000548489 SPDYE1Q8NFV5 336 aaPredicted RBP15.26■□□□□ 0.03
TGIF1-211ENST00000548489 CHRDL2Q6WN34 429 aa15.22■□□□□ 0.03
TGIF1-211ENST00000548489 CLEC11AQ9Y240 323 aa15.21■□□□□ 0.03
TGIF1-211ENST00000548489 STAG3Q9UJ98 1225 aa15.09■□□□□ 0.01
TGIF1-211ENST00000548489 PRR29P0C7W0 189 aa15.04■□□□□ -0
TGIF1-211ENST00000548489 FXR2P51116 673 aaKnown RBP eCLIP15.02■□□□□ -0
TGIF1-211ENST00000548489 PIP4P2Q8N4L2 257 aa15.02■□□□□ -0
TGIF1-211ENST00000548489 FBXO3Q9UK99 471 aa14.95□□□□□ -0.02
TGIF1-211ENST00000548489 CHADLQ6NUI6 762 aa14.92□□□□□ -0.02
TGIF1-211ENST00000548489 PRKAR2AP13861 404 aaKnown RBP14.9□□□□□ -0.02
TGIF1-211ENST00000548489 CREBZFQ9NS37 354 aa14.9□□□□□ -0.02
TGIF1-211ENST00000548489 POTEHQ6S545 545 aa14.85□□□□□ -0.03
TGIF1-211ENST00000548489 VASPP50552 380 aaPredicted RBP14.83□□□□□ -0.04
TGIF1-211ENST00000548489 MIER1Q8N108 512 aa14.79□□□□□ -0.04
TGIF1-211ENST00000548489 MNX1P50219 401 aaPredicted RBP14.76□□□□□ -0.05
TGIF1-211ENST00000548489 PLCD3Q8N3E9 789 aa14.76□□□□□ -0.05
TGIF1-211ENST00000548489 FARP1Q9Y4F1 1045 aaPredicted RBP14.72□□□□□ -0.05
TGIF1-211ENST00000548489 IFNLR1Q8IU57 520 aaPredicted RBP14.66□□□□□ -0.06
TGIF1-211ENST00000548489 PLEKHG5O94827 1062 aa14.64□□□□□ -0.07
TGIF1-211ENST00000548489 ZBTB47Q9UFB7 747 aaPredicted RBP14.55□□□□□ -0.08
TGIF1-211ENST00000548489 NPM1P06748 294 aaKnown RBP eCLIP14.54□□□□□ -0.08
TGIF1-211ENST00000548489 KLHL34Q8N239 644 aa14.54□□□□□ -0.08
TGIF1-211ENST00000548489 C19orf67A6NJJ6 358 aa14.52□□□□□ -0.08
TGIF1-211ENST00000548489 HAX1O00165 279 aa14.51□□□□□ -0.09
TGIF1-211ENST00000548489 NUBP1P53384 320 aa14.5□□□□□ -0.09
TGIF1-211ENST00000548489 EVX2Q03828 476 aa14.49□□□□□ -0.09
TGIF1-211ENST00000548489 RASEFQ8IZ41 740 aa14.47□□□□□ -0.09
TGIF1-211ENST00000548489 CD44P16070 742 aaKnown RBP14.46□□□□□ -0.09
TGIF1-211ENST00000548489 SPOCK2Q92563 424 aa14.43□□□□□ -0.1
TGIF1-211ENST00000548489 TSPYL2Q9H2G4 693 aaPredicted RBP14.37□□□□□ -0.11
TGIF1-211ENST00000548489 ZRANB1Q9UGI0 708 aa14.36□□□□□ -0.11
TGIF1-211ENST00000548489 FAM212AQ96EL1 285 aa14.31□□□□□ -0.12
TGIF1-211ENST00000548489 PAK3O75914 559 aaPredicted RBP14.31□□□□□ -0.12
TGIF1-211ENST00000548489 CCDC61Q9Y6R9 512 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms