RNA–Protein interactions for RNA: ENST00000534207.5

CHID1-223, Transcript of chitinase domain containing 1, humanhuman

TSL 5

Gene CHID1, Length 1,171 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-223ENST00000534207 NISCHQ9Y2I1 1504 aa42.97■■■■■ 4.47
CHID1-223ENST00000534207 CCDC180Q9P1Z9 1646 aa38.15■■■■□ 3.7
CHID1-223ENST00000534207 ABCC9O60706 1549 aa36.5■■■■□ 3.43
CHID1-223ENST00000534207 ZCCHC6Q5VYS8 1495 aaKnown RBP35.92■■■■□ 3.34
CHID1-223ENST00000534207 DCAF1Q9Y4B6 1507 aa35.72■■■■□ 3.31
CHID1-223ENST00000534207 MYO15BQ96JP2 1530 aa35.7■■■■□ 3.31
CHID1-223ENST00000534207 NACADO15069 1562 aa35.66■■■■□ 3.3
CHID1-223ENST00000534207 RB1CC1Q8TDY2 1594 aa35.55■■■■□ 3.28
CHID1-223ENST00000534207 DCAF8L2P0C7V8 631 aa35.35■■■■□ 3.25
CHID1-223ENST00000534207 UNC13AQ9UPW8 1703 aa34.81■■■■□ 3.16
CHID1-223ENST00000534207 SCRIBQ14160 1630 aa34.62■■■■□ 3.13
CHID1-223ENST00000534207 BICRAQ9NZM4 1560 aa34.4■■■■□ 3.1
CHID1-223ENST00000534207 SHROOM4Q9ULL8 1493 aa34.27■■■■□ 3.08
CHID1-223ENST00000534207 PABPN1Q86U42 306 aaKnown RBP eCLIP34.07■■■■□ 3.04
CHID1-223ENST00000534207 EIF4G1Q04637 1599 aaKnown RBP33.45■■■□□ 2.95
CHID1-223ENST00000534207 BAZ1AQ9NRL2 1556 aaPredicted RBP33.31■■■□□ 2.92
CHID1-223ENST00000534207 CECR2Q9BXF3 1484 aa33.3■■■□□ 2.92
CHID1-223ENST00000534207 SMARCA4P51532 1647 aa33.26■■■□□ 2.91
CHID1-223ENST00000534207 CC2D2AQ9P2K1 1620 aa33.17■■■□□ 2.9
CHID1-223ENST00000534207 MROH2BQ7Z745 1585 aa33.05■■■□□ 2.88
CHID1-223ENST00000534207 PEG3Q9GZU2 1588 aa33.01■■■□□ 2.88
CHID1-223ENST00000534207 SMARCA2P51531 1590 aa32.96■■■□□ 2.87
CHID1-223ENST00000534207 DNAJC5BQ9UF47 199 aa32.92■■■□□ 2.86
CHID1-223ENST00000534207 ATAD2BQ9ULI0 1458 aa32.88■■■□□ 2.85
CHID1-223ENST00000534207 RSF1Q96T23 1441 aaPredicted RBP32.85■■■□□ 2.85
CHID1-223ENST00000534207 NCAPD3P42695 1498 aa32.83■■■□□ 2.85
CHID1-223ENST00000534207 HMGXB3Q12766 1538 aa32.8■■■□□ 2.84
CHID1-223ENST00000534207 WIZO95785 1651 aa32.75■■■□□ 2.83
CHID1-223ENST00000534207 BAZ1BQ9UIG0 1483 aaKnown RBP32.64■■■□□ 2.82
CHID1-223ENST00000534207 TOP2AP11388 1531 aaKnown RBP32.51■■■□□ 2.79
CHID1-223ENST00000534207 SUPT5HO00267 1087 aaKnown RBP32.2■■■□□ 2.75
CHID1-223ENST00000534207 CCDC88BA6NC98 1476 aa32.02■■■□□ 2.72
CHID1-223ENST00000534207 LAMC3Q9Y6N6 1575 aa31.94■■■□□ 2.7
CHID1-223ENST00000534207 CADPSQ9ULU8 1353 aa31.84■■■□□ 2.69
CHID1-223ENST00000534207 PRDM2Q13029 1718 aa31.83■■■□□ 2.69
CHID1-223ENST00000534207 CFTRP13569 1480 aa31.81■■■□□ 2.68
CHID1-223ENST00000534207 NESP48681 1621 aa31.74■■■□□ 2.67
CHID1-223ENST00000534207 PDS5BQ9NTI5 1447 aa31.62■■■□□ 2.65
CHID1-223ENST00000534207 KIF21AQ7Z4S6 1674 aa31.54■■■□□ 2.64
CHID1-223ENST00000534207 FANCD2Q9BXW9 1451 aa31.47■■■□□ 2.63
CHID1-223ENST00000534207 ERCC6Q03468 1493 aa31.46■■■□□ 2.63
CHID1-223ENST00000534207 CEP164Q9UPV0 1460 aa31.41■■■□□ 2.62
CHID1-223ENST00000534207 THOC2Q8NI27 1593 aaKnown RBP31.32■■■□□ 2.6
CHID1-223ENST00000534207 MRC2Q9UBG0 1479 aa31.27■■■□□ 2.6
CHID1-223ENST00000534207 WDR62O43379 1518 aa31.2■■■□□ 2.59
CHID1-223ENST00000534207 ABCC8Q09428 1581 aa31.18■■■□□ 2.58
CHID1-223ENST00000534207 DNMBPQ6XZF7 1577 aa31.13■■■□□ 2.57
CHID1-223ENST00000534207 URB2Q14146 1524 aaKnown RBP31.12■■■□□ 2.57
CHID1-223ENST00000534207 CUX2O14529 1486 aa31.07■■■□□ 2.56
CHID1-223ENST00000534207 TOPBP1Q92547 1522 aa31.06■■■□□ 2.56
CHID1-223ENST00000534207 BIVM-ERCC5R4GMW8 1640 aa31■■■□□ 2.55
CHID1-223ENST00000534207 CUX1P39880 1505 aa30.99■■■□□ 2.55
CHID1-223ENST00000534207 WRNQ14191 1432 aaPredicted RBP eCLIP30.98■■■□□ 2.55
CHID1-223ENST00000534207 TOP2BQ02880 1626 aa30.95■■■□□ 2.55
CHID1-223ENST00000534207 SYNJ1O43426 1573 aa30.9■■■□□ 2.54
CHID1-223ENST00000534207 POLA1P09884 1462 aaPredicted RBP30.81■■■□□ 2.52
CHID1-223ENST00000534207 FGD5Q6ZNL6 1462 aa30.81■■■□□ 2.52
CHID1-223ENST00000534207 IFT140Q96RY7 1462 aa30.76■■■□□ 2.51
CHID1-223ENST00000534207 TARBP1Q13395 1621 aaKnown RBP30.73■■■□□ 2.51
CHID1-223ENST00000534207 WDR97A6NE52 1622 aa30.69■■■□□ 2.5
CHID1-223ENST00000534207 SOGA1O94964 1423 aa30.65■■■□□ 2.5
CHID1-223ENST00000534207 ABCA10Q8WWZ4 1543 aa30.6■■■□□ 2.49
CHID1-223ENST00000534207 RAD54L2Q9Y4B4 1467 aa30.58■■■□□ 2.49
CHID1-223ENST00000534207 EIF4G3O43432 1585 aaKnown RBP30.49■■■□□ 2.47
CHID1-223ENST00000534207 TRIM41Q8WV44 630 aa30.49■■■□□ 2.47
CHID1-223ENST00000534207 ABCA5Q8WWZ7 1642 aa30.47■■■□□ 2.47
CHID1-223ENST00000534207 CHIC1Q5VXU3 224 aa30.46■■■□□ 2.47
CHID1-223ENST00000534207 ZNF608Q9ULD9 1512 aaPredicted RBP30.46■■■□□ 2.47
CHID1-223ENST00000534207 PBRM1Q86U86 1689 aa30.37■■■□□ 2.45
CHID1-223ENST00000534207 GAPVD1Q14C86 1478 aa30.35■■■□□ 2.45
CHID1-223ENST00000534207 AQRO60306 1485 aaKnown RBP eCLIP30.34■■■□□ 2.45
CHID1-223ENST00000534207 TDRD9Q8NDG6 1382 aaKnown RBP30.34■■■□□ 2.45
CHID1-223ENST00000534207 KIF27Q86VH2 1401 aa30.31■■■□□ 2.44
CHID1-223ENST00000534207 GRIN2BQ13224 1484 aa30.3■■■□□ 2.44
CHID1-223ENST00000534207 ERICH3Q5RHP9 1530 aa30.27■■■□□ 2.44
CHID1-223ENST00000534207 MAGI1Q96QZ7 1491 aaPredicted RBP30.21■■■□□ 2.43
CHID1-223ENST00000534207 EEA1Q15075 1411 aa30.17■■■□□ 2.42
CHID1-223ENST00000534207 CUL7Q14999 1698 aa30.15■■■□□ 2.42
CHID1-223ENST00000534207 SNAPC4Q5SXM2 1469 aa30.13■■■□□ 2.41
CHID1-223ENST00000534207 ADAMTS12P58397 1594 aa30.11■■■□□ 2.41
CHID1-223ENST00000534207 RUSC2Q8N2Y8 1516 aa30.08■■■□□ 2.41
CHID1-223ENST00000534207 IGF1RP08069 1367 aa30.07■■■□□ 2.4
CHID1-223ENST00000534207 SYNJ2O15056 1496 aa30.05■■■□□ 2.4
CHID1-223ENST00000534207 CHD1O14646 1710 aa30.04■■■□□ 2.4
CHID1-223ENST00000534207 FHAD1B1AJZ9 1412 aa30.04■■■□□ 2.4
CHID1-223ENST00000534207 DNAJC5Q9H3Z4 198 aa30.01■■■□□ 2.39
CHID1-223ENST00000534207 GRIN2AQ12879 1464 aa29.91■■■□□ 2.38
CHID1-223ENST00000534207 CARMIL1Q5VZK9 1371 aa29.9■■■□□ 2.38
CHID1-223ENST00000534207 PRXQ9BXM0 1461 aa29.88■■■□□ 2.37
CHID1-223ENST00000534207 CSRNP3Q8WYN3 585 aa29.88■■■□□ 2.37
CHID1-223ENST00000534207 CHMP7Q8WUX9 453 aaPredicted RBP29.85■■■□□ 2.37
CHID1-223ENST00000534207 RAPGEF2Q9Y4G8 1499 aa29.85■■■□□ 2.37
CHID1-223ENST00000534207 KIF21BO75037 1637 aa29.83■■■□□ 2.37
CHID1-223ENST00000534207 NUP160Q12769 1436 aa29.78■■■□□ 2.36
CHID1-223ENST00000534207 FBLN2P98095 1184 aa29.76■■■□□ 2.35
CHID1-223ENST00000534207 CEP170Q5SW79 1584 aa29.73■■■□□ 2.35
CHID1-223ENST00000534207 OSCARQ8IYS5 282 aa29.73■■■□□ 2.35
CHID1-223ENST00000534207 CLASP1Q7Z460 1538 aa29.71■■■□□ 2.35
CHID1-223ENST00000534207 FAM9AQ8IZU1 332 aaPredicted RBP29.7■■■□□ 2.35
CHID1-223ENST00000534207 CTTNBP2Q8WZ74 1663 aa29.67■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 338.6 ms