RNA–Protein interactions for RNA: ENST00000440014.6

PDE4A-204, Transcript of phosphodiesterase 4A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDE4A, Length 2,478 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-204ENST00000440014 NISCHQ9Y2I1 1504 aa26.97■■□□□ 1.91
PDE4A-204ENST00000440014 CCDC180Q9P1Z9 1646 aa23.84■■□□□ 1.41
PDE4A-204ENST00000440014 ABCC9O60706 1549 aa23.03■■□□□ 1.28
PDE4A-204ENST00000440014 ZCCHC6Q5VYS8 1495 aaKnown RBP22.54■■□□□ 1.2
PDE4A-204ENST00000440014 SHROOM4Q9ULL8 1493 aa22.46■■□□□ 1.19
PDE4A-204ENST00000440014 DCAF8L2P0C7V8 631 aa22.38■■□□□ 1.17
PDE4A-204ENST00000440014 NACADO15069 1562 aa22.36■■□□□ 1.17
PDE4A-204ENST00000440014 DCAF1Q9Y4B6 1507 aa22.35■■□□□ 1.17
PDE4A-204ENST00000440014 MYO15BQ96JP2 1530 aa22.34■■□□□ 1.17
PDE4A-204ENST00000440014 RB1CC1Q8TDY2 1594 aa22.3■■□□□ 1.16
PDE4A-204ENST00000440014 SUPT5HO00267 1087 aaKnown RBP22.28■■□□□ 1.16
PDE4A-204ENST00000440014 HRCP23327 699 aa22.21■■□□□ 1.15
PDE4A-204ENST00000440014 CHIC1Q5VXU3 224 aa21.89■■□□□ 1.1
PDE4A-204ENST00000440014 PCGF6Q9BYE7 350 aa21.83■■□□□ 1.08
PDE4A-204ENST00000440014 UNC13AQ9UPW8 1703 aa21.76■■□□□ 1.07
PDE4A-204ENST00000440014 SCRIBQ14160 1630 aa21.76■■□□□ 1.07
PDE4A-204ENST00000440014 PPARGC1BQ86YN6 1023 aaKnown RBP21.67■■□□□ 1.06
PDE4A-204ENST00000440014 BICRAQ9NZM4 1560 aa21.62■■□□□ 1.05
PDE4A-204ENST00000440014 PABPN1Q86U42 306 aaKnown RBP eCLIP21.57■■□□□ 1.04
PDE4A-204ENST00000440014 LOC105371045A0A1W2PR82 267 aa21.3■■□□□ 1
PDE4A-204ENST00000440014 TRIM26Q12899 539 aaPredicted RBP21.26■□□□□ 0.99
PDE4A-204ENST00000440014 PELP1Q8IZL8 1130 aaKnown RBP21.26■□□□□ 0.99
PDE4A-204ENST00000440014 ZEB1P37275 1124 aaPredicted RBP21.05■□□□□ 0.96
PDE4A-204ENST00000440014 EIF4G1Q04637 1599 aaKnown RBP21.02■□□□□ 0.96
PDE4A-204ENST00000440014 CECR2Q9BXF3 1484 aa20.97■□□□□ 0.95
PDE4A-204ENST00000440014 DNAJC5BQ9UF47 199 aa20.88■□□□□ 0.93
PDE4A-204ENST00000440014 BAZ1AQ9NRL2 1556 aaPredicted RBP20.88■□□□□ 0.93
PDE4A-204ENST00000440014 SMARCA4P51532 1647 aa20.86■□□□□ 0.93
PDE4A-204ENST00000440014 CC2D2AQ9P2K1 1620 aa20.85■□□□□ 0.93
PDE4A-204ENST00000440014 SCAF1Q9H7N4 1312 aaKnown RBP20.82■□□□□ 0.92
PDE4A-204ENST00000440014 MROH2BQ7Z745 1585 aa20.79■□□□□ 0.92
PDE4A-204ENST00000440014 TRIM41Q8WV44 630 aa20.69■□□□□ 0.9
PDE4A-204ENST00000440014 ATAD2BQ9ULI0 1458 aa20.68■□□□□ 0.9
PDE4A-204ENST00000440014 RSF1Q96T23 1441 aaPredicted RBP20.67■□□□□ 0.9
PDE4A-204ENST00000440014 PEG3Q9GZU2 1588 aa20.67■□□□□ 0.9
PDE4A-204ENST00000440014 SMARCA2P51531 1590 aa20.66■□□□□ 0.9
PDE4A-204ENST00000440014 NCAPD3P42695 1498 aa20.64■□□□□ 0.89
PDE4A-204ENST00000440014 FAM9AQ8IZU1 332 aaPredicted RBP20.58■□□□□ 0.88
PDE4A-204ENST00000440014 WIZO95785 1651 aa20.56■□□□□ 0.88
PDE4A-204ENST00000440014 HMGXB3Q12766 1538 aa20.55■□□□□ 0.88
PDE4A-204ENST00000440014 BAZ1BQ9UIG0 1483 aaKnown RBP20.52■□□□□ 0.88
PDE4A-204ENST00000440014 MYT1Q01538 1121 aa20.45■□□□□ 0.86
PDE4A-204ENST00000440014 ACIN1Q9UKV3 1341 aaKnown RBP20.43■□□□□ 0.86
PDE4A-204ENST00000440014 EHMT2Q96KQ7 1210 aa20.42■□□□□ 0.86
PDE4A-204ENST00000440014 TOP2AP11388 1531 aaKnown RBP20.38■□□□□ 0.85
PDE4A-204ENST00000440014 NEUROD1Q13562 356 aa20.35■□□□□ 0.85
PDE4A-204ENST00000440014 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.31■□□□□ 0.84
PDE4A-204ENST00000440014 CCER1Q8TC90 406 aaPredicted RBP20.31■□□□□ 0.84
PDE4A-204ENST00000440014 CENPBP07199 599 aaPredicted RBP20.25■□□□□ 0.83
PDE4A-204ENST00000440014 DIEXFQ68CQ4 756 aaKnown RBP20.22■□□□□ 0.83
PDE4A-204ENST00000440014 GTF3C3Q9Y5Q9 886 aa20.22■□□□□ 0.83
PDE4A-204ENST00000440014 CCDC88BA6NC98 1476 aa20.14■□□□□ 0.81
PDE4A-204ENST00000440014 CADPSQ9ULU8 1353 aa20.04■□□□□ 0.8
PDE4A-204ENST00000440014 LAMC3Q9Y6N6 1575 aa20.03■□□□□ 0.8
PDE4A-204ENST00000440014 NESP48681 1621 aa20.02■□□□□ 0.8
PDE4A-204ENST00000440014 WRNQ14191 1432 aaPredicted RBP eCLIP19.99■□□□□ 0.79
PDE4A-204ENST00000440014 CFTRP13569 1480 aa19.99■□□□□ 0.79
PDE4A-204ENST00000440014 TTBK1Q5TCY1 1321 aaPredicted RBP19.92■□□□□ 0.78
PDE4A-204ENST00000440014 ZNF316A6NFI3 1004 aaPredicted RBP19.91■□□□□ 0.78
PDE4A-204ENST00000440014 PDS5BQ9NTI5 1447 aa19.89■□□□□ 0.77
PDE4A-204ENST00000440014 CEP162Q5TB80 1403 aa19.88■□□□□ 0.77
PDE4A-204ENST00000440014 ERCC6Q03468 1493 aa19.83■□□□□ 0.76
PDE4A-204ENST00000440014 PRDM2Q13029 1718 aa19.82■□□□□ 0.76
PDE4A-204ENST00000440014 FANCD2Q9BXW9 1451 aa19.8■□□□□ 0.76
PDE4A-204ENST00000440014 YTHDC1Q96MU7 727 aaKnown RBP19.8■□□□□ 0.76
PDE4A-204ENST00000440014 TNIKQ9UKE5 1360 aa19.79■□□□□ 0.76
PDE4A-204ENST00000440014 ABCC8Q09428 1581 aa19.78■□□□□ 0.76
PDE4A-204ENST00000440014 KIF21AQ7Z4S6 1674 aa19.78■□□□□ 0.76
PDE4A-204ENST00000440014 CEP164Q9UPV0 1460 aa19.75■□□□□ 0.75
PDE4A-204ENST00000440014 MIER1Q8N108 512 aa19.7■□□□□ 0.74
PDE4A-204ENST00000440014 SOGA1O94964 1423 aa19.7■□□□□ 0.74
PDE4A-204ENST00000440014 EEA1Q15075 1411 aa19.67■□□□□ 0.74
PDE4A-204ENST00000440014 MRC2Q9UBG0 1479 aa19.66■□□□□ 0.74
PDE4A-204ENST00000440014 THOC2Q8NI27 1593 aaKnown RBP19.66■□□□□ 0.74
PDE4A-204ENST00000440014 UBTFP17480 764 aaKnown RBP19.64■□□□□ 0.74
PDE4A-204ENST00000440014 CSRNP3Q8WYN3 585 aa19.63■□□□□ 0.73
PDE4A-204ENST00000440014 WDR62O43379 1518 aa19.59■□□□□ 0.73
PDE4A-204ENST00000440014 URB2Q14146 1524 aaKnown RBP19.59■□□□□ 0.73
PDE4A-204ENST00000440014 GOLGA3Q08378 1498 aa19.58■□□□□ 0.73
PDE4A-204ENST00000440014 RUSC2Q8N2Y8 1516 aa19.57■□□□□ 0.72
PDE4A-204ENST00000440014 HNRNPUL2Q1KMD3 747 aaKnown RBP19.56■□□□□ 0.72
PDE4A-204ENST00000440014 CUX2O14529 1486 aa19.54■□□□□ 0.72
PDE4A-204ENST00000440014 DNMBPQ6XZF7 1577 aa19.53■□□□□ 0.72
PDE4A-204ENST00000440014 TOPBP1Q92547 1522 aa19.52■□□□□ 0.72
PDE4A-204ENST00000440014 CUX1P39880 1505 aa19.48■□□□□ 0.71
PDE4A-204ENST00000440014 CLSPNQ9HAW4 1339 aa19.42■□□□□ 0.7
PDE4A-204ENST00000440014 SYNJ1O43426 1573 aa19.4■□□□□ 0.7
PDE4A-204ENST00000440014 TOP2BQ02880 1626 aa19.39■□□□□ 0.7
PDE4A-204ENST00000440014 CLIP1P30622 1438 aa19.39■□□□□ 0.69
PDE4A-204ENST00000440014 BIVM-ERCC5R4GMW8 1640 aa19.39■□□□□ 0.69
PDE4A-204ENST00000440014 KIF21BO75037 1637 aa19.38■□□□□ 0.69
PDE4A-204ENST00000440014 POLA1P09884 1462 aaPredicted RBP19.38■□□□□ 0.69
PDE4A-204ENST00000440014 VPS8Q8N3P4 1428 aa19.37■□□□□ 0.69
PDE4A-204ENST00000440014 FGD5Q6ZNL6 1462 aa19.37■□□□□ 0.69
PDE4A-204ENST00000440014 APLP2Q06481 763 aa19.34■□□□□ 0.69
PDE4A-204ENST00000440014 IFT140Q96RY7 1462 aa19.33■□□□□ 0.69
PDE4A-204ENST00000440014 SUPT16HQ9Y5B9 1047 aaKnown RBP19.33■□□□□ 0.69
PDE4A-204ENST00000440014 TARBP1Q13395 1621 aaKnown RBP19.28■□□□□ 0.68
PDE4A-204ENST00000440014 RAD54L2Q9Y4B4 1467 aa19.28■□□□□ 0.68
PDE4A-204ENST00000440014 DHX57Q6P158 1386 aaKnown RBP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms