RNA–Protein interactions for RNA: ENST00000440014.6

PDE4A-204, Transcript of phosphodiesterase 4A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDE4A, Length 2,478 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-204ENST00000440014 NISCHQ9Y2I1 1504 aa26.97■■□□□ 1.91
PDE4A-204ENST00000440014 CCDC180Q9P1Z9 1646 aa23.84■■□□□ 1.41
PDE4A-204ENST00000440014 ABCC9O60706 1549 aa23.03■■□□□ 1.28
PDE4A-204ENST00000440014 ZCCHC6Q5VYS8 1495 aaKnown RBP22.54■■□□□ 1.2
PDE4A-204ENST00000440014 SHROOM4Q9ULL8 1493 aa22.46■■□□□ 1.19
PDE4A-204ENST00000440014 DCAF8L2P0C7V8 631 aa22.38■■□□□ 1.17
PDE4A-204ENST00000440014 NACADO15069 1562 aa22.36■■□□□ 1.17
PDE4A-204ENST00000440014 DCAF1Q9Y4B6 1507 aa22.35■■□□□ 1.17
PDE4A-204ENST00000440014 MYO15BQ96JP2 1530 aa22.34■■□□□ 1.17
PDE4A-204ENST00000440014 RB1CC1Q8TDY2 1594 aa22.3■■□□□ 1.16
PDE4A-204ENST00000440014 SUPT5HO00267 1087 aaKnown RBP22.28■■□□□ 1.16
PDE4A-204ENST00000440014 HRCP23327 699 aa22.21■■□□□ 1.15
PDE4A-204ENST00000440014 CHIC1Q5VXU3 224 aa21.89■■□□□ 1.1
PDE4A-204ENST00000440014 PCGF6Q9BYE7 350 aa21.83■■□□□ 1.08
PDE4A-204ENST00000440014 UNC13AQ9UPW8 1703 aa21.76■■□□□ 1.07
PDE4A-204ENST00000440014 SCRIBQ14160 1630 aa21.76■■□□□ 1.07
PDE4A-204ENST00000440014 PPARGC1BQ86YN6 1023 aaKnown RBP21.67■■□□□ 1.06
PDE4A-204ENST00000440014 BICRAQ9NZM4 1560 aa21.62■■□□□ 1.05
PDE4A-204ENST00000440014 PABPN1Q86U42 306 aaKnown RBP eCLIP21.57■■□□□ 1.04
PDE4A-204ENST00000440014 LOC105371045A0A1W2PR82 267 aa21.3■■□□□ 1
PDE4A-204ENST00000440014 TRIM26Q12899 539 aaPredicted RBP21.26■□□□□ 0.99
PDE4A-204ENST00000440014 PELP1Q8IZL8 1130 aaKnown RBP21.26■□□□□ 0.99
PDE4A-204ENST00000440014 ZEB1P37275 1124 aaPredicted RBP21.05■□□□□ 0.96
PDE4A-204ENST00000440014 EIF4G1Q04637 1599 aaKnown RBP21.02■□□□□ 0.96
PDE4A-204ENST00000440014 CECR2Q9BXF3 1484 aa20.97■□□□□ 0.95
PDE4A-204ENST00000440014 DNAJC5BQ9UF47 199 aa20.88■□□□□ 0.93
PDE4A-204ENST00000440014 BAZ1AQ9NRL2 1556 aaPredicted RBP20.88■□□□□ 0.93
PDE4A-204ENST00000440014 SMARCA4P51532 1647 aa20.86■□□□□ 0.93
PDE4A-204ENST00000440014 CC2D2AQ9P2K1 1620 aa20.85■□□□□ 0.93
PDE4A-204ENST00000440014 SCAF1Q9H7N4 1312 aaKnown RBP20.82■□□□□ 0.92
PDE4A-204ENST00000440014 MROH2BQ7Z745 1585 aa20.79■□□□□ 0.92
PDE4A-204ENST00000440014 TRIM41Q8WV44 630 aa20.69■□□□□ 0.9
PDE4A-204ENST00000440014 ATAD2BQ9ULI0 1458 aa20.68■□□□□ 0.9
PDE4A-204ENST00000440014 RSF1Q96T23 1441 aaPredicted RBP20.67■□□□□ 0.9
PDE4A-204ENST00000440014 PEG3Q9GZU2 1588 aa20.67■□□□□ 0.9
PDE4A-204ENST00000440014 SMARCA2P51531 1590 aa20.66■□□□□ 0.9
PDE4A-204ENST00000440014 NCAPD3P42695 1498 aa20.64■□□□□ 0.89
PDE4A-204ENST00000440014 FAM9AQ8IZU1 332 aaPredicted RBP20.58■□□□□ 0.88
PDE4A-204ENST00000440014 WIZO95785 1651 aa20.56■□□□□ 0.88
PDE4A-204ENST00000440014 HMGXB3Q12766 1538 aa20.55■□□□□ 0.88
PDE4A-204ENST00000440014 BAZ1BQ9UIG0 1483 aaKnown RBP20.52■□□□□ 0.88
PDE4A-204ENST00000440014 MYT1Q01538 1121 aa20.45■□□□□ 0.86
PDE4A-204ENST00000440014 ACIN1Q9UKV3 1341 aaKnown RBP20.43■□□□□ 0.86
PDE4A-204ENST00000440014 EHMT2Q96KQ7 1210 aa20.42■□□□□ 0.86
PDE4A-204ENST00000440014 TOP2AP11388 1531 aaKnown RBP20.38■□□□□ 0.85
PDE4A-204ENST00000440014 NEUROD1Q13562 356 aa20.35■□□□□ 0.85
PDE4A-204ENST00000440014 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.31■□□□□ 0.84
PDE4A-204ENST00000440014 CCER1Q8TC90 406 aaPredicted RBP20.31■□□□□ 0.84
PDE4A-204ENST00000440014 CENPBP07199 599 aaPredicted RBP20.25■□□□□ 0.83
PDE4A-204ENST00000440014 DIEXFQ68CQ4 756 aaKnown RBP20.22■□□□□ 0.83
PDE4A-204ENST00000440014 GTF3C3Q9Y5Q9 886 aa20.22■□□□□ 0.83
PDE4A-204ENST00000440014 CCDC88BA6NC98 1476 aa20.14■□□□□ 0.81
PDE4A-204ENST00000440014 CADPSQ9ULU8 1353 aa20.04■□□□□ 0.8
PDE4A-204ENST00000440014 LAMC3Q9Y6N6 1575 aa20.03■□□□□ 0.8
PDE4A-204ENST00000440014 NESP48681 1621 aa20.02■□□□□ 0.8
PDE4A-204ENST00000440014 WRNQ14191 1432 aaPredicted RBP eCLIP19.99■□□□□ 0.79
PDE4A-204ENST00000440014 CFTRP13569 1480 aa19.99■□□□□ 0.79
PDE4A-204ENST00000440014 TTBK1Q5TCY1 1321 aaPredicted RBP19.92■□□□□ 0.78
PDE4A-204ENST00000440014 ZNF316A6NFI3 1004 aaPredicted RBP19.91■□□□□ 0.78
PDE4A-204ENST00000440014 PDS5BQ9NTI5 1447 aa19.89■□□□□ 0.77
PDE4A-204ENST00000440014 CEP162Q5TB80 1403 aa19.88■□□□□ 0.77
PDE4A-204ENST00000440014 ERCC6Q03468 1493 aa19.83■□□□□ 0.76
PDE4A-204ENST00000440014 PRDM2Q13029 1718 aa19.82■□□□□ 0.76
PDE4A-204ENST00000440014 FANCD2Q9BXW9 1451 aa19.8■□□□□ 0.76
PDE4A-204ENST00000440014 YTHDC1Q96MU7 727 aaKnown RBP19.8■□□□□ 0.76
PDE4A-204ENST00000440014 TNIKQ9UKE5 1360 aa19.79■□□□□ 0.76
PDE4A-204ENST00000440014 ABCC8Q09428 1581 aa19.78■□□□□ 0.76
PDE4A-204ENST00000440014 KIF21AQ7Z4S6 1674 aa19.78■□□□□ 0.76
PDE4A-204ENST00000440014 CEP164Q9UPV0 1460 aa19.75■□□□□ 0.75
PDE4A-204ENST00000440014 MIER1Q8N108 512 aa19.7■□□□□ 0.74
PDE4A-204ENST00000440014 SOGA1O94964 1423 aa19.7■□□□□ 0.74
PDE4A-204ENST00000440014 EEA1Q15075 1411 aa19.67■□□□□ 0.74
PDE4A-204ENST00000440014 MRC2Q9UBG0 1479 aa19.66■□□□□ 0.74
PDE4A-204ENST00000440014 THOC2Q8NI27 1593 aaKnown RBP19.66■□□□□ 0.74
PDE4A-204ENST00000440014 UBTFP17480 764 aaKnown RBP19.64■□□□□ 0.74
PDE4A-204ENST00000440014 CSRNP3Q8WYN3 585 aa19.63■□□□□ 0.73
PDE4A-204ENST00000440014 WDR62O43379 1518 aa19.59■□□□□ 0.73
PDE4A-204ENST00000440014 URB2Q14146 1524 aaKnown RBP19.59■□□□□ 0.73
PDE4A-204ENST00000440014 GOLGA3Q08378 1498 aa19.58■□□□□ 0.73
PDE4A-204ENST00000440014 RUSC2Q8N2Y8 1516 aa19.57■□□□□ 0.72
PDE4A-204ENST00000440014 HNRNPUL2Q1KMD3 747 aaKnown RBP19.56■□□□□ 0.72
PDE4A-204ENST00000440014 CUX2O14529 1486 aa19.54■□□□□ 0.72
PDE4A-204ENST00000440014 DNMBPQ6XZF7 1577 aa19.53■□□□□ 0.72
PDE4A-204ENST00000440014 TOPBP1Q92547 1522 aa19.52■□□□□ 0.72
PDE4A-204ENST00000440014 CUX1P39880 1505 aa19.48■□□□□ 0.71
PDE4A-204ENST00000440014 CLSPNQ9HAW4 1339 aa19.42■□□□□ 0.7
PDE4A-204ENST00000440014 SYNJ1O43426 1573 aa19.4■□□□□ 0.7
PDE4A-204ENST00000440014 TOP2BQ02880 1626 aa19.39■□□□□ 0.7
PDE4A-204ENST00000440014 CLIP1P30622 1438 aa19.39■□□□□ 0.69
PDE4A-204ENST00000440014 BIVM-ERCC5R4GMW8 1640 aa19.39■□□□□ 0.69
PDE4A-204ENST00000440014 KIF21BO75037 1637 aa19.38■□□□□ 0.69
PDE4A-204ENST00000440014 POLA1P09884 1462 aaPredicted RBP19.38■□□□□ 0.69
PDE4A-204ENST00000440014 VPS8Q8N3P4 1428 aa19.37■□□□□ 0.69
PDE4A-204ENST00000440014 FGD5Q6ZNL6 1462 aa19.37■□□□□ 0.69
PDE4A-204ENST00000440014 APLP2Q06481 763 aa19.34■□□□□ 0.69
PDE4A-204ENST00000440014 IFT140Q96RY7 1462 aa19.33■□□□□ 0.69
PDE4A-204ENST00000440014 SUPT16HQ9Y5B9 1047 aaKnown RBP19.33■□□□□ 0.69
PDE4A-204ENST00000440014 TARBP1Q13395 1621 aaKnown RBP19.28■□□□□ 0.68
PDE4A-204ENST00000440014 RAD54L2Q9Y4B4 1467 aa19.28■□□□□ 0.68
PDE4A-204ENST00000440014 DHX57Q6P158 1386 aaKnown RBP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms