RNA–Protein interactions for RNA: ENST00000308924.8

U2AF2-201, Transcript of U2 small nuclear RNA auxiliary factor 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF2, Length 1,698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2-201ENST00000308924 NISCHQ9Y2I1 1504 aa37.55■■■■□ 3.6
U2AF2-201ENST00000308924 CCDC180Q9P1Z9 1646 aa32.48■■■□□ 2.79
U2AF2-201ENST00000308924 ABCC9O60706 1549 aa31.92■■■□□ 2.7
U2AF2-201ENST00000308924 ZCCHC6Q5VYS8 1495 aaKnown RBP31.77■■■□□ 2.68
U2AF2-201ENST00000308924 DCAF1Q9Y4B6 1507 aa31.16■■■□□ 2.58
U2AF2-201ENST00000308924 SHROOM4Q9ULL8 1493 aa31.03■■■□□ 2.56
U2AF2-201ENST00000308924 DNAJC5BQ9UF47 199 aa30.5■■■□□ 2.47
U2AF2-201ENST00000308924 MYO15BQ96JP2 1530 aa30.48■■■□□ 2.47
U2AF2-201ENST00000308924 DCAF8L2P0C7V8 631 aa30.4■■■□□ 2.46
U2AF2-201ENST00000308924 SUPT5HO00267 1087 aaKnown RBP30.26■■■□□ 2.43
U2AF2-201ENST00000308924 RB1CC1Q8TDY2 1594 aa30.14■■■□□ 2.42
U2AF2-201ENST00000308924 NACADO15069 1562 aa29.97■■■□□ 2.39
U2AF2-201ENST00000308924 SCRIBQ14160 1630 aa29.84■■■□□ 2.37
U2AF2-201ENST00000308924 PABPN1Q86U42 306 aaKnown RBP eCLIP29.58■■■□□ 2.333e-8■■□□□ 12.2
U2AF2-201ENST00000308924 CHIC1Q5VXU3 224 aa29.53■■■□□ 2.32
U2AF2-201ENST00000308924 UNC13AQ9UPW8 1703 aa29.46■■■□□ 2.31
U2AF2-201ENST00000308924 RSF1Q96T23 1441 aaPredicted RBP29.42■■■□□ 2.3
U2AF2-201ENST00000308924 BICRAQ9NZM4 1560 aa29.26■■■□□ 2.27
U2AF2-201ENST00000308924 CECR2Q9BXF3 1484 aa29.03■■■□□ 2.24
U2AF2-201ENST00000308924 MROH2BQ7Z745 1585 aa29.01■■■□□ 2.23
U2AF2-201ENST00000308924 BAZ1AQ9NRL2 1556 aaPredicted RBP28.96■■■□□ 2.23
U2AF2-201ENST00000308924 WIZO95785 1651 aa28.84■■■□□ 2.21
U2AF2-201ENST00000308924 CC2D2AQ9P2K1 1620 aa28.84■■■□□ 2.21
U2AF2-201ENST00000308924 SMARCA4P51532 1647 aa28.73■■■□□ 2.19
U2AF2-201ENST00000308924 TOP2AP11388 1531 aaKnown RBP28.63■■■□□ 2.17
U2AF2-201ENST00000308924 EIF4G1Q04637 1599 aaKnown RBP28.6■■■□□ 2.17
U2AF2-201ENST00000308924 DNAJC5Q9H3Z4 198 aa28.56■■■□□ 2.16
U2AF2-201ENST00000308924 TRIM41Q8WV44 630 aa28.45■■■□□ 2.14
U2AF2-201ENST00000308924 PEG3Q9GZU2 1588 aa28.39■■■□□ 2.14
U2AF2-201ENST00000308924 SMARCA2P51531 1590 aa28.36■■■□□ 2.13
U2AF2-201ENST00000308924 LOC105371045A0A1W2PR82 267 aa28.32■■■□□ 2.12
U2AF2-201ENST00000308924 CCDC88BA6NC98 1476 aa28.25■■■□□ 2.11
U2AF2-201ENST00000308924 HRCP23327 699 aa28■■■□□ 2.07
U2AF2-201ENST00000308924 ATAD2BQ9ULI0 1458 aa27.98■■■□□ 2.07
U2AF2-201ENST00000308924 PCGF6Q9BYE7 350 aa27.96■■■□□ 2.07
U2AF2-201ENST00000308924 ABCC8Q09428 1581 aa27.93■■■□□ 2.06
U2AF2-201ENST00000308924 BAZ1BQ9UIG0 1483 aaKnown RBP27.87■■■□□ 2.05
U2AF2-201ENST00000308924 TRIM26Q12899 539 aaPredicted RBP27.85■■■□□ 2.05
U2AF2-201ENST00000308924 FAM9AQ8IZU1 332 aaPredicted RBP27.85■■■□□ 2.05
U2AF2-201ENST00000308924 CUX2O14529 1486 aa27.85■■■□□ 2.05
U2AF2-201ENST00000308924 EEA1Q15075 1411 aa27.84■■■□□ 2.05
U2AF2-201ENST00000308924 HMGXB3Q12766 1538 aa27.72■■■□□ 2.03
U2AF2-201ENST00000308924 WRNQ14191 1432 aaPredicted RBP eCLIP27.67■■■□□ 2.02
U2AF2-201ENST00000308924 ERCC6Q03468 1493 aa27.64■■■□□ 2.02
U2AF2-201ENST00000308924 NCAPD3P42695 1498 aa27.6■■■□□ 2.01
U2AF2-201ENST00000308924 SYNJ1O43426 1573 aa27.57■■■□□ 2
U2AF2-201ENST00000308924 SOGA1O94964 1423 aa27.54■■■□□ 2
U2AF2-201ENST00000308924 TNIKQ9UKE5 1360 aa27.49■■□□□ 1.99
U2AF2-201ENST00000308924 KIF21BO75037 1637 aa27.45■■□□□ 1.98
U2AF2-201ENST00000308924 GOLGA3Q08378 1498 aa27.44■■□□□ 1.98
U2AF2-201ENST00000308924 BIVM-ERCC5R4GMW8 1640 aa27.43■■□□□ 1.98
U2AF2-201ENST00000308924 TOP2BQ02880 1626 aa27.43■■□□□ 1.98
U2AF2-201ENST00000308924 CSRNP3Q8WYN3 585 aa27.42■■□□□ 1.98
U2AF2-201ENST00000308924 CEP162Q5TB80 1403 aa27.39■■□□□ 1.98
U2AF2-201ENST00000308924 RUSC2Q8N2Y8 1516 aa27.38■■□□□ 1.97
U2AF2-201ENST00000308924 CEP164Q9UPV0 1460 aa27.35■■□□□ 1.97
U2AF2-201ENST00000308924 EHMT2Q96KQ7 1210 aa27.33■■□□□ 1.97
U2AF2-201ENST00000308924 PRDM2Q13029 1718 aa27.31■■□□□ 1.96
U2AF2-201ENST00000308924 ZEB1P37275 1124 aaPredicted RBP27.27■■□□□ 1.96
U2AF2-201ENST00000308924 CFTRP13569 1480 aa27.23■■□□□ 1.95
U2AF2-201ENST00000308924 NESP48681 1621 aa27.22■■□□□ 1.95
U2AF2-201ENST00000308924 THOC2Q8NI27 1593 aaKnown RBP27.13■■□□□ 1.93
U2AF2-201ENST00000308924 CUX1P39880 1505 aa27.1■■□□□ 1.93
U2AF2-201ENST00000308924 ERICH3Q5RHP9 1530 aa27.1■■□□□ 1.93
U2AF2-201ENST00000308924 UBTFP17480 764 aaKnown RBP27.08■■□□□ 1.92
U2AF2-201ENST00000308924 PPARGC1BQ86YN6 1023 aaKnown RBP27.05■■□□□ 1.92
U2AF2-201ENST00000308924 RAPGEF2Q9Y4G8 1499 aa26.99■■□□□ 1.91
U2AF2-201ENST00000308924 LAMC3Q9Y6N6 1575 aa26.98■■□□□ 1.91
U2AF2-201ENST00000308924 PRXQ9BXM0 1461 aa26.98■■□□□ 1.91
U2AF2-201ENST00000308924 CLIP1P30622 1438 aa26.97■■□□□ 1.91
U2AF2-201ENST00000308924 VPS8Q8N3P4 1428 aa26.91■■□□□ 1.9
U2AF2-201ENST00000308924 CADPSQ9ULU8 1353 aa26.91■■□□□ 1.9
U2AF2-201ENST00000308924 KIF27Q86VH2 1401 aa26.9■■□□□ 1.9
U2AF2-201ENST00000308924 KIF21AQ7Z4S6 1674 aa26.89■■□□□ 1.9
U2AF2-201ENST00000308924 PDS5BQ9NTI5 1447 aa26.83■■□□□ 1.89
U2AF2-201ENST00000308924 MRC2Q9UBG0 1479 aa26.65■■□□□ 1.86
U2AF2-201ENST00000308924 FGD5Q6ZNL6 1462 aa26.64■■□□□ 1.86
U2AF2-201ENST00000308924 ARAP1Q96P48 1450 aa26.64■■□□□ 1.86
U2AF2-201ENST00000308924 FANCD2Q9BXW9 1451 aa26.64■■□□□ 1.85
U2AF2-201ENST00000308924 DNMBPQ6XZF7 1577 aa26.63■■□□□ 1.85
U2AF2-201ENST00000308924 WDR62O43379 1518 aa26.61■■□□□ 1.85
U2AF2-201ENST00000308924 CCER1Q8TC90 406 aaPredicted RBP26.54■■□□□ 1.84
U2AF2-201ENST00000308924 APLP2Q06481 763 aa26.52■■□□□ 1.84
U2AF2-201ENST00000308924 IGF1RP08069 1367 aa26.52■■□□□ 1.84
U2AF2-201ENST00000308924 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.5■■□□□ 1.83
U2AF2-201ENST00000308924 ABCA10Q8WWZ4 1543 aa26.48■■□□□ 1.83
U2AF2-201ENST00000308924 TOPBP1Q92547 1522 aa26.47■■□□□ 1.83
U2AF2-201ENST00000308924 ARHGAP35Q9NRY4 1499 aa26.46■■□□□ 1.83
U2AF2-201ENST00000308924 TTBK1Q5TCY1 1321 aaPredicted RBP26.44■■□□□ 1.82
U2AF2-201ENST00000308924 OSCARQ8IYS5 282 aa26.43■■□□□ 1.82
U2AF2-201ENST00000308924 CARMIL1Q5VZK9 1371 aa26.41■■□□□ 1.82
U2AF2-201ENST00000308924 CUL7Q14999 1698 aa26.41■■□□□ 1.82
U2AF2-201ENST00000308924 WDR97A6NE52 1622 aa26.4■■□□□ 1.82
U2AF2-201ENST00000308924 POLA1P09884 1462 aaPredicted RBP26.39■■□□□ 1.82
U2AF2-201ENST00000308924 MAP3K1Q13233 1512 aa26.38■■□□□ 1.81
U2AF2-201ENST00000308924 URB2Q14146 1524 aaKnown RBP26.27■■□□□ 1.8
U2AF2-201ENST00000308924 RRBP1Q9P2E9 1410 aaKnown RBP26.27■■□□□ 1.8
U2AF2-201ENST00000308924 EFCAB5A4FU69 1503 aa26.25■■□□□ 1.79
U2AF2-201ENST00000308924 RAD54L2Q9Y4B4 1467 aa26.25■■□□□ 1.79
U2AF2-201ENST00000308924 RANGAP1P46060 587 aaPredicted RBP26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms