RNA–Protein interactions for RNA: ENST00000460174.1

SLC19A1-206, Transcript of solute carrier family 19 member 1, humanhuman

TSL 3

Gene SLC19A1, Length 600 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC19A1-206ENST00000460174 NISCHQ9Y2I1 1504 aa32.77■■■□□ 2.84
SLC19A1-206ENST00000460174 CCDC180Q9P1Z9 1646 aa28.99■■■□□ 2.23
SLC19A1-206ENST00000460174 ABCC9O60706 1549 aa28.02■■■□□ 2.08
SLC19A1-206ENST00000460174 ZCCHC6Q5VYS8 1495 aaKnown RBP27.41■■□□□ 1.98
SLC19A1-206ENST00000460174 DCAF8L2P0C7V8 631 aa27.27■■□□□ 1.96
SLC19A1-206ENST00000460174 NACADO15069 1562 aa27.14■■□□□ 1.94
SLC19A1-206ENST00000460174 DCAF1Q9Y4B6 1507 aa27.12■■□□□ 1.93
SLC19A1-206ENST00000460174 RB1CC1Q8TDY2 1594 aa27.11■■□□□ 1.93
SLC19A1-206ENST00000460174 MYO15BQ96JP2 1530 aa27.07■■□□□ 1.92
SLC19A1-206ENST00000460174 SCRIBQ14160 1630 aa26.54■■□□□ 1.84
SLC19A1-206ENST00000460174 UNC13AQ9UPW8 1703 aa26.45■■□□□ 1.82
SLC19A1-206ENST00000460174 BICRAQ9NZM4 1560 aa26.23■■□□□ 1.79
SLC19A1-206ENST00000460174 PABPN1Q86U42 306 aaKnown RBP eCLIP26.21■■□□□ 1.79
SLC19A1-206ENST00000460174 SHROOM4Q9ULL8 1493 aa26.2■■□□□ 1.78
SLC19A1-206ENST00000460174 EIF4G1Q04637 1599 aaKnown RBP25.55■■□□□ 1.68
SLC19A1-206ENST00000460174 CECR2Q9BXF3 1484 aa25.47■■□□□ 1.67
SLC19A1-206ENST00000460174 BAZ1AQ9NRL2 1556 aaPredicted RBP25.41■■□□□ 1.66
SLC19A1-206ENST00000460174 SMARCA4P51532 1647 aa25.37■■□□□ 1.65
SLC19A1-206ENST00000460174 CC2D2AQ9P2K1 1620 aa25.34■■□□□ 1.65
SLC19A1-206ENST00000460174 MROH2BQ7Z745 1585 aa25.27■■□□□ 1.64
SLC19A1-206ENST00000460174 DNAJC5BQ9UF47 199 aa25.24■■□□□ 1.63
SLC19A1-206ENST00000460174 SMARCA2P51531 1590 aa25.14■■□□□ 1.61
SLC19A1-206ENST00000460174 RSF1Q96T23 1441 aaPredicted RBP25.12■■□□□ 1.61
SLC19A1-206ENST00000460174 ATAD2BQ9ULI0 1458 aa25.11■■□□□ 1.61
SLC19A1-206ENST00000460174 PEG3Q9GZU2 1588 aa25.08■■□□□ 1.61
SLC19A1-206ENST00000460174 WIZO95785 1651 aa25.02■■□□□ 1.6
SLC19A1-206ENST00000460174 NCAPD3P42695 1498 aa25.02■■□□□ 1.6
SLC19A1-206ENST00000460174 HMGXB3Q12766 1538 aa24.98■■□□□ 1.59
SLC19A1-206ENST00000460174 BAZ1BQ9UIG0 1483 aaKnown RBP24.98■■□□□ 1.59
SLC19A1-206ENST00000460174 SUPT5HO00267 1087 aaKnown RBP24.81■■□□□ 1.56
SLC19A1-206ENST00000460174 TOP2AP11388 1531 aaKnown RBP24.81■■□□□ 1.56
SLC19A1-206ENST00000460174 CCDC88BA6NC98 1476 aa24.48■■□□□ 1.51
SLC19A1-206ENST00000460174 LAMC3Q9Y6N6 1575 aa24.34■■□□□ 1.49
SLC19A1-206ENST00000460174 NESP48681 1621 aa24.33■■□□□ 1.49
SLC19A1-206ENST00000460174 CADPSQ9ULU8 1353 aa24.32■■□□□ 1.48
SLC19A1-206ENST00000460174 CFTRP13569 1480 aa24.26■■□□□ 1.47
SLC19A1-206ENST00000460174 PDS5BQ9NTI5 1447 aa24.17■■□□□ 1.46
SLC19A1-206ENST00000460174 ERCC6Q03468 1493 aa24.16■■□□□ 1.46
SLC19A1-206ENST00000460174 PRDM2Q13029 1718 aa24.13■■□□□ 1.45
SLC19A1-206ENST00000460174 FANCD2Q9BXW9 1451 aa24.08■■□□□ 1.45
SLC19A1-206ENST00000460174 KIF21AQ7Z4S6 1674 aa24.07■■□□□ 1.44
SLC19A1-206ENST00000460174 CEP164Q9UPV0 1460 aa24.05■■□□□ 1.44
SLC19A1-206ENST00000460174 MRC2Q9UBG0 1479 aa23.91■■□□□ 1.42
SLC19A1-206ENST00000460174 THOC2Q8NI27 1593 aaKnown RBP23.9■■□□□ 1.42
SLC19A1-206ENST00000460174 WDR62O43379 1518 aa23.8■■□□□ 1.4
SLC19A1-206ENST00000460174 URB2Q14146 1524 aaKnown RBP23.8■■□□□ 1.4
SLC19A1-206ENST00000460174 DNMBPQ6XZF7 1577 aa23.76■■□□□ 1.39
SLC19A1-206ENST00000460174 ABCC8Q09428 1581 aa23.75■■□□□ 1.39
SLC19A1-206ENST00000460174 TOPBP1Q92547 1522 aa23.73■■□□□ 1.39
SLC19A1-206ENST00000460174 CUX1P39880 1505 aa23.7■■□□□ 1.38
SLC19A1-206ENST00000460174 CUX2O14529 1486 aa23.7■■□□□ 1.38
SLC19A1-206ENST00000460174 WRNQ14191 1432 aaPredicted RBP eCLIP23.7■■□□□ 1.38
SLC19A1-206ENST00000460174 SYNJ1O43426 1573 aa23.63■■□□□ 1.37
SLC19A1-206ENST00000460174 TOP2BQ02880 1626 aa23.6■■□□□ 1.37
SLC19A1-206ENST00000460174 BIVM-ERCC5R4GMW8 1640 aa23.59■■□□□ 1.37
SLC19A1-206ENST00000460174 FGD5Q6ZNL6 1462 aa23.57■■□□□ 1.36
SLC19A1-206ENST00000460174 POLA1P09884 1462 aaPredicted RBP23.56■■□□□ 1.36
SLC19A1-206ENST00000460174 IFT140Q96RY7 1462 aa23.49■■□□□ 1.35
SLC19A1-206ENST00000460174 SOGA1O94964 1423 aa23.45■■□□□ 1.34
SLC19A1-206ENST00000460174 RAD54L2Q9Y4B4 1467 aa23.44■■□□□ 1.34
SLC19A1-206ENST00000460174 TARBP1Q13395 1621 aaKnown RBP23.43■■□□□ 1.34
SLC19A1-206ENST00000460174 TRIM41Q8WV44 630 aa23.41■■□□□ 1.34
SLC19A1-206ENST00000460174 WDR97A6NE52 1622 aa23.35■■□□□ 1.33
SLC19A1-206ENST00000460174 ABCA10Q8WWZ4 1543 aa23.34■■□□□ 1.33
SLC19A1-206ENST00000460174 ZNF608Q9ULD9 1512 aaPredicted RBP23.34■■□□□ 1.33
SLC19A1-206ENST00000460174 CHIC1Q5VXU3 224 aa23.33■■□□□ 1.33
SLC19A1-206ENST00000460174 EIF4G3O43432 1585 aaKnown RBP23.31■■□□□ 1.32
SLC19A1-206ENST00000460174 TDRD9Q8NDG6 1382 aaKnown RBP23.27■■□□□ 1.32
SLC19A1-206ENST00000460174 AQRO60306 1485 aaKnown RBP eCLIP23.26■■□□□ 1.31
SLC19A1-206ENST00000460174 ABCA5Q8WWZ7 1642 aa23.23■■□□□ 1.31
SLC19A1-206ENST00000460174 GAPVD1Q14C86 1478 aa23.22■■□□□ 1.31
SLC19A1-206ENST00000460174 KIF27Q86VH2 1401 aa23.18■■□□□ 1.3
SLC19A1-206ENST00000460174 GRIN2BQ13224 1484 aa23.16■■□□□ 1.3
SLC19A1-206ENST00000460174 PBRM1Q86U86 1689 aa23.16■■□□□ 1.3
SLC19A1-206ENST00000460174 SNAPC4Q5SXM2 1469 aa23.1■■□□□ 1.29
SLC19A1-206ENST00000460174 ERICH3Q5RHP9 1530 aa23.08■■□□□ 1.28
SLC19A1-206ENST00000460174 MAGI1Q96QZ7 1491 aaPredicted RBP23.05■■□□□ 1.28
SLC19A1-206ENST00000460174 RUSC2Q8N2Y8 1516 aa23.05■■□□□ 1.28
SLC19A1-206ENST00000460174 ADAMTS12P58397 1594 aa23.01■■□□□ 1.27
SLC19A1-206ENST00000460174 EEA1Q15075 1411 aa22.99■■□□□ 1.27
SLC19A1-206ENST00000460174 IGF1RP08069 1367 aa22.98■■□□□ 1.27
SLC19A1-206ENST00000460174 CUL7Q14999 1698 aa22.97■■□□□ 1.27
SLC19A1-206ENST00000460174 SYNJ2O15056 1496 aa22.96■■□□□ 1.27
SLC19A1-206ENST00000460174 FHAD1B1AJZ9 1412 aa22.95■■□□□ 1.26
SLC19A1-206ENST00000460174 FBLN2P98095 1184 aa22.94■■□□□ 1.26
SLC19A1-206ENST00000460174 FAM9AQ8IZU1 332 aaPredicted RBP22.94■■□□□ 1.26
SLC19A1-206ENST00000460174 CHD1O14646 1710 aa22.91■■□□□ 1.26
SLC19A1-206ENST00000460174 CHMP7Q8WUX9 453 aaPredicted RBP22.91■■□□□ 1.26
SLC19A1-206ENST00000460174 CARMIL1Q5VZK9 1371 aa22.89■■□□□ 1.25
SLC19A1-206ENST00000460174 GRIN2AQ12879 1464 aa22.86■■□□□ 1.25
SLC19A1-206ENST00000460174 CSRNP3Q8WYN3 585 aa22.86■■□□□ 1.25
SLC19A1-206ENST00000460174 RAPGEF2Q9Y4G8 1499 aa22.81■■□□□ 1.24
SLC19A1-206ENST00000460174 PRXQ9BXM0 1461 aa22.8■■□□□ 1.24
SLC19A1-206ENST00000460174 OSCARQ8IYS5 282 aa22.75■■□□□ 1.23
SLC19A1-206ENST00000460174 KIF21BO75037 1637 aa22.74■■□□□ 1.23
SLC19A1-206ENST00000460174 NUP160Q12769 1436 aa22.73■■□□□ 1.23
SLC19A1-206ENST00000460174 CEP170Q5SW79 1584 aa22.72■■□□□ 1.23
SLC19A1-206ENST00000460174 CLASP1Q7Z460 1538 aa22.67■■□□□ 1.22
SLC19A1-206ENST00000460174 GOLGA3Q08378 1498 aa22.66■■□□□ 1.22
SLC19A1-206ENST00000460174 EHMT2Q96KQ7 1210 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms