RNA–Protein interactions for RNA: ENST00000618001.4

TGIF1-223, Transcript of TGFB induced factor homeobox 1, humanhuman

TSL 2 BASIC

Gene TGIF1, Length 3,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGIF1-223ENST00000618001 NISCHQ9Y2I1 1504 aa20.62■□□□□ 0.89
TGIF1-223ENST00000618001 CCDC180Q9P1Z9 1646 aa18.58■□□□□ 0.56
TGIF1-223ENST00000618001 ABCC9O60706 1549 aa18.38■□□□□ 0.53
TGIF1-223ENST00000618001 RB1CC1Q8TDY2 1594 aa17.62■□□□□ 0.41
TGIF1-223ENST00000618001 NACADO15069 1562 aa17.53■□□□□ 0.4
TGIF1-223ENST00000618001 MYO15BQ96JP2 1530 aa17.37■□□□□ 0.37
TGIF1-223ENST00000618001 UNC13AQ9UPW8 1703 aa17.21■□□□□ 0.35
TGIF1-223ENST00000618001 DNAJC5BQ9UF47 199 aa17.2■□□□□ 0.34
TGIF1-223ENST00000618001 DCAF8L2P0C7V8 631 aa17.13■□□□□ 0.33
TGIF1-223ENST00000618001 DCAF1Q9Y4B6 1507 aa17.13■□□□□ 0.33
TGIF1-223ENST00000618001 ZCCHC6Q5VYS8 1495 aaKnown RBP17.12■□□□□ 0.33
TGIF1-223ENST00000618001 BICRAQ9NZM4 1560 aa17.1■□□□□ 0.33
TGIF1-223ENST00000618001 PABPN1Q86U42 306 aaKnown RBP eCLIP17.05■□□□□ 0.32
TGIF1-223ENST00000618001 SHROOM4Q9ULL8 1493 aa17■□□□□ 0.31
TGIF1-223ENST00000618001 SCRIBQ14160 1630 aa16.8■□□□□ 0.28
TGIF1-223ENST00000618001 CC2D2AQ9P2K1 1620 aa16.68■□□□□ 0.26
TGIF1-223ENST00000618001 EIF4G1Q04637 1599 aaKnown RBP16.67■□□□□ 0.26
TGIF1-223ENST00000618001 CECR2Q9BXF3 1484 aa16.6■□□□□ 0.25
TGIF1-223ENST00000618001 NCAPD3P42695 1498 aa16.16■□□□□ 0.18
TGIF1-223ENST00000618001 SMARCA4P51532 1647 aa16.09■□□□□ 0.17
TGIF1-223ENST00000618001 ATAD2BQ9ULI0 1458 aa16.08■□□□□ 0.16
TGIF1-223ENST00000618001 HMGXB3Q12766 1538 aa16.08■□□□□ 0.16
TGIF1-223ENST00000618001 SMARCA2P51531 1590 aa16.07■□□□□ 0.16
TGIF1-223ENST00000618001 BAZ1AQ9NRL2 1556 aaPredicted RBP16.02■□□□□ 0.16
TGIF1-223ENST00000618001 PEG3Q9GZU2 1588 aa16.01■□□□□ 0.15
TGIF1-223ENST00000618001 CUX2O14529 1486 aa15.96■□□□□ 0.15
TGIF1-223ENST00000618001 BAZ1BQ9UIG0 1483 aaKnown RBP15.91■□□□□ 0.14
TGIF1-223ENST00000618001 ERCC6Q03468 1493 aa15.89■□□□□ 0.13
TGIF1-223ENST00000618001 MROH2BQ7Z745 1585 aa15.85■□□□□ 0.13
TGIF1-223ENST00000618001 DNAJC5Q9H3Z4 198 aa15.83■□□□□ 0.12
TGIF1-223ENST00000618001 LAMC3Q9Y6N6 1575 aa15.81■□□□□ 0.12
TGIF1-223ENST00000618001 NESP48681 1621 aa15.8■□□□□ 0.12
TGIF1-223ENST00000618001 THOC2Q8NI27 1593 aaKnown RBP15.75■□□□□ 0.11
TGIF1-223ENST00000618001 PDS5BQ9NTI5 1447 aa15.66■□□□□ 0.1
TGIF1-223ENST00000618001 KIF21AQ7Z4S6 1674 aa15.66■□□□□ 0.1
TGIF1-223ENST00000618001 WIZO95785 1651 aa15.65■□□□□ 0.1
TGIF1-223ENST00000618001 CADPSQ9ULU8 1353 aa15.63■□□□□ 0.09
TGIF1-223ENST00000618001 WDR62O43379 1518 aa15.55■□□□□ 0.08
TGIF1-223ENST00000618001 MRC2Q9UBG0 1479 aa15.54■□□□□ 0.08
TGIF1-223ENST00000618001 RSF1Q96T23 1441 aaPredicted RBP15.53■□□□□ 0.08
TGIF1-223ENST00000618001 TOP2AP11388 1531 aaKnown RBP15.52■□□□□ 0.07
TGIF1-223ENST00000618001 CFTRP13569 1480 aa15.49■□□□□ 0.07
TGIF1-223ENST00000618001 CEP164Q9UPV0 1460 aa15.47■□□□□ 0.07
TGIF1-223ENST00000618001 FANCD2Q9BXW9 1451 aa15.44■□□□□ 0.06
TGIF1-223ENST00000618001 PRDM2Q13029 1718 aa15.38■□□□□ 0.05
TGIF1-223ENST00000618001 URB2Q14146 1524 aaKnown RBP15.33■□□□□ 0.04
TGIF1-223ENST00000618001 CCDC88BA6NC98 1476 aa15.29■□□□□ 0.04
TGIF1-223ENST00000618001 IFT140Q96RY7 1462 aa15.19■□□□□ 0.02
TGIF1-223ENST00000618001 ABCC8Q09428 1581 aa15.18■□□□□ 0.02
TGIF1-223ENST00000618001 TOPBP1Q92547 1522 aa15.16■□□□□ 0.02
TGIF1-223ENST00000618001 DNMBPQ6XZF7 1577 aa15.14■□□□□ 0.01
TGIF1-223ENST00000618001 OSCARQ8IYS5 282 aa15.11■□□□□ 0.01
TGIF1-223ENST00000618001 ZNF608Q9ULD9 1512 aaPredicted RBP15.1■□□□□ 0.01
TGIF1-223ENST00000618001 EIF4G3O43432 1585 aaKnown RBP15.07■□□□□ 0
TGIF1-223ENST00000618001 TARBP1Q13395 1621 aaKnown RBP15.07■□□□□ 0
TGIF1-223ENST00000618001 TRIM41Q8WV44 630 aa15.02□□□□□ -0.01
TGIF1-223ENST00000618001 POLA1P09884 1462 aaPredicted RBP15.01□□□□□ -0.01
TGIF1-223ENST00000618001 WDR97A6NE52 1622 aa15□□□□□ -0.01
TGIF1-223ENST00000618001 RIMBP3CA6NJZ7 1639 aa14.98□□□□□ -0.01
TGIF1-223ENST00000618001 RIMBP3BA6NNM3 1639 aa14.98□□□□□ -0.01
TGIF1-223ENST00000618001 RIMBP3Q9UFD9 1639 aa14.98□□□□□ -0.01
TGIF1-223ENST00000618001 ARHGEF11O15085 1522 aa14.93□□□□□ -0.02
TGIF1-223ENST00000618001 AQRO60306 1485 aaKnown RBP eCLIP14.93□□□□□ -0.021e-7■■■■■ 26.9
TGIF1-223ENST00000618001 CHD1O14646 1710 aa14.93□□□□□ -0.02
TGIF1-223ENST00000618001 CUX1P39880 1505 aa14.91□□□□□ -0.02
TGIF1-223ENST00000618001 SOGA1O94964 1423 aa14.9□□□□□ -0.02
TGIF1-223ENST00000618001 FGD5Q6ZNL6 1462 aa14.9□□□□□ -0.02
TGIF1-223ENST00000618001 RAD54L2Q9Y4B4 1467 aa14.9□□□□□ -0.02
TGIF1-223ENST00000618001 MAGI1Q96QZ7 1491 aaPredicted RBP14.84□□□□□ -0.03
TGIF1-223ENST00000618001 SNAPC4Q5SXM2 1469 aa14.83□□□□□ -0.04
TGIF1-223ENST00000618001 TDRD9Q8NDG6 1382 aaKnown RBP14.83□□□□□ -0.04
TGIF1-223ENST00000618001 CLASP1Q7Z460 1538 aa14.82□□□□□ -0.04
TGIF1-223ENST00000618001 GRIN2BQ13224 1484 aa14.81□□□□□ -0.04
TGIF1-223ENST00000618001 ARAP1Q96P48 1450 aa14.78□□□□□ -0.04
TGIF1-223ENST00000618001 SYNJ1O43426 1573 aa14.78□□□□□ -0.04
TGIF1-223ENST00000618001 ABCA10Q8WWZ4 1543 aa14.78□□□□□ -0.04
TGIF1-223ENST00000618001 ABCA5Q8WWZ7 1642 aa14.78□□□□□ -0.04
TGIF1-223ENST00000618001 PBRM1Q86U86 1689 aa14.78□□□□□ -0.04
TGIF1-223ENST00000618001 SYNJ2O15056 1496 aa14.77□□□□□ -0.04
TGIF1-223ENST00000618001 GAPVD1Q14C86 1478 aa14.74□□□□□ -0.05
TGIF1-223ENST00000618001 FBLN2P98095 1184 aa14.73□□□□□ -0.05
TGIF1-223ENST00000618001 BIVM-ERCC5R4GMW8 1640 aa14.73□□□□□ -0.05
TGIF1-223ENST00000618001 TOP2BQ02880 1626 aa14.71□□□□□ -0.06
TGIF1-223ENST00000618001 CYB5RLQ6IPT4 315 aa14.69□□□□□ -0.06
TGIF1-223ENST00000618001 CHMP7Q8WUX9 453 aaPredicted RBP14.69□□□□□ -0.06
TGIF1-223ENST00000618001 WRNQ14191 1432 aaPredicted RBP eCLIP14.68□□□□□ -0.063e-13■■■■■ 117
TGIF1-223ENST00000618001 SUPT5HO00267 1087 aaKnown RBP14.66□□□□□ -0.06
TGIF1-223ENST00000618001 ADAMTS12P58397 1594 aa14.65□□□□□ -0.06
TGIF1-223ENST00000618001 GRIN2AQ12879 1464 aa14.63□□□□□ -0.07
TGIF1-223ENST00000618001 ERICH3Q5RHP9 1530 aa14.61□□□□□ -0.07
TGIF1-223ENST00000618001 NUP160Q12769 1436 aa14.6□□□□□ -0.07
TGIF1-223ENST00000618001 CEP170Q5SW79 1584 aa14.58□□□□□ -0.08
TGIF1-223ENST00000618001 FHAD1B1AJZ9 1412 aa14.58□□□□□ -0.08
TGIF1-223ENST00000618001 SHROOM2Q13796 1616 aa14.57□□□□□ -0.08
TGIF1-223ENST00000618001 ERCC6L2Q5T890 1561 aa14.5□□□□□ -0.09
TGIF1-223ENST00000618001 TRHP20396 242 aaPredicted RBP14.5□□□□□ -0.09
TGIF1-223ENST00000618001 RUSC2Q8N2Y8 1516 aa14.45□□□□□ -0.1
TGIF1-223ENST00000618001 CUL7Q14999 1698 aa14.41□□□□□ -0.1
TGIF1-223ENST00000618001 PRG4Q92954 1404 aaPredicted RBP14.39□□□□□ -0.11
TGIF1-223ENST00000618001 KIF27Q86VH2 1401 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 804.9 ms