RNA–Protein interactions for RNA: ENST00000476375.5

AGAP3-214, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

TSL 5

Gene AGAP3, Length 1,019 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-214ENST00000476375 NISCHQ9Y2I1 1504 aa31.2■■■□□ 2.59
AGAP3-214ENST00000476375 CCDC180Q9P1Z9 1646 aa27.46■■□□□ 1.99
AGAP3-214ENST00000476375 ABCC9O60706 1549 aa26.41■■□□□ 1.82
AGAP3-214ENST00000476375 ZCCHC6Q5VYS8 1495 aaKnown RBP26.1■■□□□ 1.77
AGAP3-214ENST00000476375 DCAF8L2P0C7V8 631 aa25.89■■□□□ 1.74
AGAP3-214ENST00000476375 DCAF1Q9Y4B6 1507 aa25.83■■□□□ 1.72
AGAP3-214ENST00000476375 MYO15BQ96JP2 1530 aa25.73■■□□□ 1.71
AGAP3-214ENST00000476375 NACADO15069 1562 aa25.72■■□□□ 1.71
AGAP3-214ENST00000476375 RB1CC1Q8TDY2 1594 aa25.61■■□□□ 1.69
AGAP3-214ENST00000476375 SCRIBQ14160 1630 aa25.14■■□□□ 1.61
AGAP3-214ENST00000476375 UNC13AQ9UPW8 1703 aa25.03■■□□□ 1.6
AGAP3-214ENST00000476375 SHROOM4Q9ULL8 1493 aa25.01■■□□□ 1.59
AGAP3-214ENST00000476375 BICRAQ9NZM4 1560 aa24.84■■□□□ 1.57
AGAP3-214ENST00000476375 PABPN1Q86U42 306 aaKnown RBP eCLIP24.8■■□□□ 1.56
AGAP3-214ENST00000476375 CECR2Q9BXF3 1484 aa24.26■■□□□ 1.47
AGAP3-214ENST00000476375 EIF4G1Q04637 1599 aaKnown RBP24.13■■□□□ 1.45
AGAP3-214ENST00000476375 BAZ1AQ9NRL2 1556 aaPredicted RBP24.13■■□□□ 1.45
AGAP3-214ENST00000476375 SMARCA4P51532 1647 aa24.09■■□□□ 1.45
AGAP3-214ENST00000476375 MROH2BQ7Z745 1585 aa24.07■■□□□ 1.44
AGAP3-214ENST00000476375 RSF1Q96T23 1441 aaPredicted RBP23.99■■□□□ 1.43
AGAP3-214ENST00000476375 CC2D2AQ9P2K1 1620 aa23.9■■□□□ 1.42
AGAP3-214ENST00000476375 PEG3Q9GZU2 1588 aa23.84■■□□□ 1.41
AGAP3-214ENST00000476375 ATAD2BQ9ULI0 1458 aa23.83■■□□□ 1.41
AGAP3-214ENST00000476375 WIZO95785 1651 aa23.83■■□□□ 1.4
AGAP3-214ENST00000476375 SMARCA2P51531 1590 aa23.82■■□□□ 1.4
AGAP3-214ENST00000476375 SUPT5HO00267 1087 aaKnown RBP23.81■■□□□ 1.4
AGAP3-214ENST00000476375 DNAJC5BQ9UF47 199 aa23.78■■□□□ 1.4
AGAP3-214ENST00000476375 NCAPD3P42695 1498 aa23.74■■□□□ 1.39
AGAP3-214ENST00000476375 BAZ1BQ9UIG0 1483 aaKnown RBP23.66■■□□□ 1.38
AGAP3-214ENST00000476375 HMGXB3Q12766 1538 aa23.65■■□□□ 1.38
AGAP3-214ENST00000476375 TOP2AP11388 1531 aaKnown RBP23.59■■□□□ 1.37
AGAP3-214ENST00000476375 CCDC88BA6NC98 1476 aa23.34■■□□□ 1.33
AGAP3-214ENST00000476375 CADPSQ9ULU8 1353 aa23.08■■□□□ 1.29
AGAP3-214ENST00000476375 CFTRP13569 1480 aa23.05■■□□□ 1.28
AGAP3-214ENST00000476375 NESP48681 1621 aa23.02■■□□□ 1.28
AGAP3-214ENST00000476375 LAMC3Q9Y6N6 1575 aa23.01■■□□□ 1.27
AGAP3-214ENST00000476375 PRDM2Q13029 1718 aa22.88■■□□□ 1.25
AGAP3-214ENST00000476375 PDS5BQ9NTI5 1447 aa22.84■■□□□ 1.25
AGAP3-214ENST00000476375 FANCD2Q9BXW9 1451 aa22.81■■□□□ 1.24
AGAP3-214ENST00000476375 KIF21AQ7Z4S6 1674 aa22.74■■□□□ 1.23
AGAP3-214ENST00000476375 CEP164Q9UPV0 1460 aa22.73■■□□□ 1.23
AGAP3-214ENST00000476375 ERCC6Q03468 1493 aa22.71■■□□□ 1.23
AGAP3-214ENST00000476375 ABCC8Q09428 1581 aa22.65■■□□□ 1.22
AGAP3-214ENST00000476375 WRNQ14191 1432 aaPredicted RBP eCLIP22.6■■□□□ 1.215e-6■■■■■ 29.2
AGAP3-214ENST00000476375 MRC2Q9UBG0 1479 aa22.58■■□□□ 1.2
AGAP3-214ENST00000476375 URB2Q14146 1524 aaKnown RBP22.56■■□□□ 1.2
AGAP3-214ENST00000476375 CUX1P39880 1505 aa22.54■■□□□ 1.2
AGAP3-214ENST00000476375 CHIC1Q5VXU3 224 aa22.53■■□□□ 1.2
AGAP3-214ENST00000476375 THOC2Q8NI27 1593 aaKnown RBP22.53■■□□□ 1.2
AGAP3-214ENST00000476375 SYNJ1O43426 1573 aa22.51■■□□□ 1.19
AGAP3-214ENST00000476375 DNMBPQ6XZF7 1577 aa22.51■■□□□ 1.19
AGAP3-214ENST00000476375 TOPBP1Q92547 1522 aa22.51■■□□□ 1.19
AGAP3-214ENST00000476375 WDR62O43379 1518 aa22.48■■□□□ 1.19
AGAP3-214ENST00000476375 TOP2BQ02880 1626 aa22.47■■□□□ 1.19
AGAP3-214ENST00000476375 BIVM-ERCC5R4GMW8 1640 aa22.46■■□□□ 1.19
AGAP3-214ENST00000476375 TRIM41Q8WV44 630 aa22.46■■□□□ 1.19
AGAP3-214ENST00000476375 FGD5Q6ZNL6 1462 aa22.38■■□□□ 1.17
AGAP3-214ENST00000476375 POLA1P09884 1462 aaPredicted RBP22.35■■□□□ 1.17
AGAP3-214ENST00000476375 CUX2O14529 1486 aa22.28■■□□□ 1.16
AGAP3-214ENST00000476375 SOGA1O94964 1423 aa22.28■■□□□ 1.16
AGAP3-214ENST00000476375 RAD54L2Q9Y4B4 1467 aa22.27■■□□□ 1.16
AGAP3-214ENST00000476375 IFT140Q96RY7 1462 aa22.23■■□□□ 1.15
AGAP3-214ENST00000476375 TARBP1Q13395 1621 aaKnown RBP22.21■■□□□ 1.15
AGAP3-214ENST00000476375 ABCA10Q8WWZ4 1543 aa22.18■■□□□ 1.14
AGAP3-214ENST00000476375 WDR97A6NE52 1622 aa22.15■■□□□ 1.14
AGAP3-214ENST00000476375 ZNF608Q9ULD9 1512 aaPredicted RBP22.1■■□□□ 1.13
AGAP3-214ENST00000476375 TDRD9Q8NDG6 1382 aaKnown RBP22.1■■□□□ 1.13
AGAP3-214ENST00000476375 KIF27Q86VH2 1401 aa22.08■■□□□ 1.13
AGAP3-214ENST00000476375 RUSC2Q8N2Y8 1516 aa22.07■■□□□ 1.12
AGAP3-214ENST00000476375 AQRO60306 1485 aaKnown RBP eCLIP22.04■■□□□ 1.122e-7■■■■□ 22.6
AGAP3-214ENST00000476375 ABCA5Q8WWZ7 1642 aa22.03■■□□□ 1.12
AGAP3-214ENST00000476375 GAPVD1Q14C86 1478 aa22.03■■□□□ 1.12
AGAP3-214ENST00000476375 EIF4G3O43432 1585 aaKnown RBP22.01■■□□□ 1.11
AGAP3-214ENST00000476375 EEA1Q15075 1411 aa22■■□□□ 1.11
AGAP3-214ENST00000476375 FAM9AQ8IZU1 332 aaPredicted RBP21.99■■□□□ 1.11
AGAP3-214ENST00000476375 IGF1RP08069 1367 aa21.94■■□□□ 1.1
AGAP3-214ENST00000476375 GRIN2BQ13224 1484 aa21.94■■□□□ 1.1
AGAP3-214ENST00000476375 CSRNP3Q8WYN3 585 aa21.93■■□□□ 1.1
AGAP3-214ENST00000476375 PBRM1Q86U86 1689 aa21.92■■□□□ 1.1
AGAP3-214ENST00000476375 ERICH3Q5RHP9 1530 aa21.92■■□□□ 1.1
AGAP3-214ENST00000476375 SNAPC4Q5SXM2 1469 aa21.84■■□□□ 1.09
AGAP3-214ENST00000476375 CARMIL1Q5VZK9 1371 aa21.82■■□□□ 1.08
AGAP3-214ENST00000476375 MAGI1Q96QZ7 1491 aaPredicted RBP21.82■■□□□ 1.08
AGAP3-214ENST00000476375 CUL7Q14999 1698 aa21.82■■□□□ 1.08
AGAP3-214ENST00000476375 PRXQ9BXM0 1461 aa21.79■■□□□ 1.08
AGAP3-214ENST00000476375 FHAD1B1AJZ9 1412 aa21.79■■□□□ 1.08
AGAP3-214ENST00000476375 ADAMTS12P58397 1594 aa21.78■■□□□ 1.08
AGAP3-214ENST00000476375 SYNJ2O15056 1496 aa21.74■■□□□ 1.07
AGAP3-214ENST00000476375 RAPGEF2Q9Y4G8 1499 aa21.74■■□□□ 1.07
AGAP3-214ENST00000476375 KIF21BO75037 1637 aa21.73■■□□□ 1.07
AGAP3-214ENST00000476375 CHMP7Q8WUX9 453 aaPredicted RBP21.71■■□□□ 1.07
AGAP3-214ENST00000476375 FBLN2P98095 1184 aa21.69■■□□□ 1.06
AGAP3-214ENST00000476375 EHMT2Q96KQ7 1210 aa21.68■■□□□ 1.06
AGAP3-214ENST00000476375 GOLGA3Q08378 1498 aa21.66■■□□□ 1.06
AGAP3-214ENST00000476375 GRIN2AQ12879 1464 aa21.66■■□□□ 1.06
AGAP3-214ENST00000476375 LOC105371045A0A1W2PR82 267 aa21.63■■□□□ 1.05
AGAP3-214ENST00000476375 CHD1O14646 1710 aa21.63■■□□□ 1.05
AGAP3-214ENST00000476375 UBTFP17480 764 aaKnown RBP21.58■■□□□ 1.05
AGAP3-214ENST00000476375 NUP160Q12769 1436 aa21.55■■□□□ 1.04
AGAP3-214ENST00000476375 CEP170Q5SW79 1584 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms