RNA–Protein interactions for RNA: ENST00000536055.5

ATAD3A-207, Transcript of ATPase family, AAA domain containing 3A, humanhuman

TSL 2 BASIC

Gene ATAD3A, Length 2,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3A-207ENST00000536055 NISCHQ9Y2I1 1504 aa38.3■■■■□ 3.72
ATAD3A-207ENST00000536055 CCDC180Q9P1Z9 1646 aa33.1■■■□□ 2.89
ATAD3A-207ENST00000536055 ZCCHC6Q5VYS8 1495 aaKnown RBP32.22■■■□□ 2.75
ATAD3A-207ENST00000536055 DCAF8L2P0C7V8 631 aa31.79■■■□□ 2.68
ATAD3A-207ENST00000536055 SHROOM4Q9ULL8 1493 aa31.79■■■□□ 2.68
ATAD3A-207ENST00000536055 DCAF1Q9Y4B6 1507 aa31.5■■■□□ 2.63
ATAD3A-207ENST00000536055 ABCC9O60706 1549 aa31.27■■■□□ 2.6
ATAD3A-207ENST00000536055 MYO15BQ96JP2 1530 aa30.96■■■□□ 2.55
ATAD3A-207ENST00000536055 NACADO15069 1562 aa30.77■■■□□ 2.52
ATAD3A-207ENST00000536055 SCRIBQ14160 1630 aa30.73■■■□□ 2.51
ATAD3A-207ENST00000536055 SUPT5HO00267 1087 aaKnown RBP30.72■■■□□ 2.51
ATAD3A-207ENST00000536055 RB1CC1Q8TDY2 1594 aa30.46■■■□□ 2.47
ATAD3A-207ENST00000536055 UNC13AQ9UPW8 1703 aa30.01■■■□□ 2.39
ATAD3A-207ENST00000536055 RSF1Q96T23 1441 aaPredicted RBP29.91■■■□□ 2.38
ATAD3A-207ENST00000536055 CECR2Q9BXF3 1484 aa29.88■■■□□ 2.37
ATAD3A-207ENST00000536055 MROH2BQ7Z745 1585 aa29.7■■■□□ 2.34
ATAD3A-207ENST00000536055 PABPN1Q86U42 306 aaKnown RBP eCLIP29.65■■■□□ 2.342e-6■■■■□ 20.4
ATAD3A-207ENST00000536055 BICRAQ9NZM4 1560 aa29.65■■■□□ 2.34
ATAD3A-207ENST00000536055 WIZO95785 1651 aa29.5■■■□□ 2.31
ATAD3A-207ENST00000536055 BAZ1AQ9NRL2 1556 aaPredicted RBP29.49■■■□□ 2.31
ATAD3A-207ENST00000536055 CHIC1Q5VXU3 224 aa29.49■■■□□ 2.31
ATAD3A-207ENST00000536055 SMARCA4P51532 1647 aa29.38■■■□□ 2.29
ATAD3A-207ENST00000536055 TOP2AP11388 1531 aaKnown RBP29.06■■■□□ 2.24
ATAD3A-207ENST00000536055 PEG3Q9GZU2 1588 aa28.9■■■□□ 2.22
ATAD3A-207ENST00000536055 CCDC88BA6NC98 1476 aa28.86■■■□□ 2.21
ATAD3A-207ENST00000536055 SMARCA2P51531 1590 aa28.86■■■□□ 2.21
ATAD3A-207ENST00000536055 ATAD2BQ9ULI0 1458 aa28.82■■■□□ 2.2
ATAD3A-207ENST00000536055 EIF4G1Q04637 1599 aaKnown RBP28.75■■■□□ 2.19
ATAD3A-207ENST00000536055 TRIM41Q8WV44 630 aa28.73■■■□□ 2.19
ATAD3A-207ENST00000536055 BAZ1BQ9UIG0 1483 aaKnown RBP28.67■■■□□ 2.18
ATAD3A-207ENST00000536055 LOC105371045A0A1W2PR82 267 aa28.52■■■□□ 2.16
ATAD3A-207ENST00000536055 ABCC8Q09428 1581 aa28.46■■■□□ 2.15
ATAD3A-207ENST00000536055 NCAPD3P42695 1498 aa28.44■■■□□ 2.14
ATAD3A-207ENST00000536055 HMGXB3Q12766 1538 aa28.4■■■□□ 2.14
ATAD3A-207ENST00000536055 FAM9AQ8IZU1 332 aaPredicted RBP28.4■■■□□ 2.14
ATAD3A-207ENST00000536055 CC2D2AQ9P2K1 1620 aa28.23■■■□□ 2.11
ATAD3A-207ENST00000536055 EHMT2Q96KQ7 1210 aa28.12■■■□□ 2.09
ATAD3A-207ENST00000536055 WRNQ14191 1432 aaPredicted RBP eCLIP28.11■■■□□ 2.09
ATAD3A-207ENST00000536055 SYNJ1O43426 1573 aa28.04■■■□□ 2.08
ATAD3A-207ENST00000536055 SOGA1O94964 1423 aa27.99■■■□□ 2.07
ATAD3A-207ENST00000536055 CFTRP13569 1480 aa27.94■■■□□ 2.06
ATAD3A-207ENST00000536055 RUSC2Q8N2Y8 1516 aa27.91■■■□□ 2.06
ATAD3A-207ENST00000536055 TOP2BQ02880 1626 aa27.8■■■□□ 2.04
ATAD3A-207ENST00000536055 CADPSQ9ULU8 1353 aa27.79■■■□□ 2.04
ATAD3A-207ENST00000536055 PRDM2Q13029 1718 aa27.77■■■□□ 2.04
ATAD3A-207ENST00000536055 BIVM-ERCC5R4GMW8 1640 aa27.75■■■□□ 2.03
ATAD3A-207ENST00000536055 EEA1Q15075 1411 aa27.74■■■□□ 2.03
ATAD3A-207ENST00000536055 CSRNP3Q8WYN3 585 aa27.73■■■□□ 2.03
ATAD3A-207ENST00000536055 CUX1P39880 1505 aa27.72■■■□□ 2.03
ATAD3A-207ENST00000536055 DNAJC5BQ9UF47 199 aa27.68■■■□□ 2.02
ATAD3A-207ENST00000536055 NESP48681 1621 aa27.6■■■□□ 2.01
ATAD3A-207ENST00000536055 PCGF6Q9BYE7 350 aa27.54■■■□□ 2
ATAD3A-207ENST00000536055 FANCD2Q9BXW9 1451 aa27.52■■■□□ 2
ATAD3A-207ENST00000536055 GOLGA3Q08378 1498 aa27.49■■□□□ 1.99
ATAD3A-207ENST00000536055 UBTFP17480 764 aaKnown RBP27.49■■□□□ 1.99
ATAD3A-207ENST00000536055 TNIKQ9UKE5 1360 aa27.47■■□□□ 1.99
ATAD3A-207ENST00000536055 KIF21BO75037 1637 aa27.44■■□□□ 1.98
ATAD3A-207ENST00000536055 CEP164Q9UPV0 1460 aa27.44■■□□□ 1.98
ATAD3A-207ENST00000536055 CEP162Q5TB80 1403 aa27.42■■□□□ 1.98
ATAD3A-207ENST00000536055 LAMC3Q9Y6N6 1575 aa27.4■■□□□ 1.98
ATAD3A-207ENST00000536055 RAPGEF2Q9Y4G8 1499 aa27.38■■□□□ 1.97
ATAD3A-207ENST00000536055 FGD5Q6ZNL6 1462 aa27.36■■□□□ 1.97
ATAD3A-207ENST00000536055 KIF27Q86VH2 1401 aa27.33■■□□□ 1.97
ATAD3A-207ENST00000536055 TRIM26Q12899 539 aaPredicted RBP27.29■■□□□ 1.96
ATAD3A-207ENST00000536055 DNMBPQ6XZF7 1577 aa27.27■■□□□ 1.96
ATAD3A-207ENST00000536055 TOPBP1Q92547 1522 aa27.26■■□□□ 1.95
ATAD3A-207ENST00000536055 CUX2O14529 1486 aa27.26■■□□□ 1.95
ATAD3A-207ENST00000536055 PRXQ9BXM0 1461 aa27.25■■□□□ 1.95
ATAD3A-207ENST00000536055 PPARGC1BQ86YN6 1023 aaKnown RBP27.25■■□□□ 1.95
ATAD3A-207ENST00000536055 PDS5BQ9NTI5 1447 aa27.2■■□□□ 1.94
ATAD3A-207ENST00000536055 URB2Q14146 1524 aaKnown RBP27.19■■□□□ 1.94
ATAD3A-207ENST00000536055 KIF21AQ7Z4S6 1674 aa27.19■■□□□ 1.94
ATAD3A-207ENST00000536055 POLA1P09884 1462 aaPredicted RBP27.17■■□□□ 1.94
ATAD3A-207ENST00000536055 RAD54L2Q9Y4B4 1467 aa27.17■■□□□ 1.94
ATAD3A-207ENST00000536055 ERICH3Q5RHP9 1530 aa27.17■■□□□ 1.94
ATAD3A-207ENST00000536055 HRCP23327 699 aa27.15■■□□□ 1.94
ATAD3A-207ENST00000536055 RANGAP1P46060 587 aaPredicted RBP27.13■■□□□ 1.93
ATAD3A-207ENST00000536055 CLIP1P30622 1438 aa27.12■■□□□ 1.93
ATAD3A-207ENST00000536055 IGF1RP08069 1367 aa27.11■■□□□ 1.93
ATAD3A-207ENST00000536055 ABCA10Q8WWZ4 1543 aa27.05■■□□□ 1.92
ATAD3A-207ENST00000536055 CARMIL1Q5VZK9 1371 aa26.97■■□□□ 1.91
ATAD3A-207ENST00000536055 TTBK1Q5TCY1 1321 aaPredicted RBP26.97■■□□□ 1.91
ATAD3A-207ENST00000536055 WDR97A6NE52 1622 aa26.94■■□□□ 1.9
ATAD3A-207ENST00000536055 VPS8Q8N3P4 1428 aa26.89■■□□□ 1.9
ATAD3A-207ENST00000536055 TDRD9Q8NDG6 1382 aaKnown RBP26.88■■□□□ 1.89
ATAD3A-207ENST00000536055 MRC2Q9UBG0 1479 aa26.85■■□□□ 1.89
ATAD3A-207ENST00000536055 ARAP1Q96P48 1450 aa26.83■■□□□ 1.89
ATAD3A-207ENST00000536055 ABCA5Q8WWZ7 1642 aa26.81■■□□□ 1.88
ATAD3A-207ENST00000536055 TARBP1Q13395 1621 aaKnown RBP26.81■■□□□ 1.88
ATAD3A-207ENST00000536055 GAPVD1Q14C86 1478 aa26.77■■□□□ 1.88
ATAD3A-207ENST00000536055 CUL7Q14999 1698 aa26.76■■□□□ 1.87
ATAD3A-207ENST00000536055 ARHGAP35Q9NRY4 1499 aa26.75■■□□□ 1.87
ATAD3A-207ENST00000536055 ERCC6Q03468 1493 aa26.7■■□□□ 1.86
ATAD3A-207ENST00000536055 WDR62O43379 1518 aa26.69■■□□□ 1.86
ATAD3A-207ENST00000536055 AQRO60306 1485 aaKnown RBP eCLIP26.65■■□□□ 1.865e-7■■■■□ 22.6
ATAD3A-207ENST00000536055 APLP2Q06481 763 aa26.64■■□□□ 1.86
ATAD3A-207ENST00000536055 PBRM1Q86U86 1689 aa26.59■■□□□ 1.85
ATAD3A-207ENST00000536055 ZNF608Q9ULD9 1512 aaPredicted RBP26.58■■□□□ 1.85
ATAD3A-207ENST00000536055 THOC2Q8NI27 1593 aaKnown RBP26.57■■□□□ 1.84
ATAD3A-207ENST00000536055 CTTNBP2Q8WZ74 1663 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms