RNA–Protein interactions for RNA: ENST00000343820.9

TGIF1-202, Transcript of TGFB induced factor homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGIF1, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGIF1-202ENST00000343820 NISCHQ9Y2I1 1504 aa64.38■■■■■ 7.9
TGIF1-202ENST00000343820 CCDC180Q9P1Z9 1646 aa55.6■■■■■ 6.49
TGIF1-202ENST00000343820 ZCCHC6Q5VYS8 1495 aaKnown RBP54.43■■■■■ 6.3
TGIF1-202ENST00000343820 SHROOM4Q9ULL8 1493 aa53.88■■■■■ 6.22
TGIF1-202ENST00000343820 DCAF1Q9Y4B6 1507 aa53.15■■■■■ 6.1
TGIF1-202ENST00000343820 ABCC9O60706 1549 aa53.09■■■■■ 6.09
TGIF1-202ENST00000343820 DCAF8L2P0C7V8 631 aa52.71■■■■■ 6.03
TGIF1-202ENST00000343820 SUPT5HO00267 1087 aaKnown RBP52.65■■■■■ 6.02
TGIF1-202ENST00000343820 MYO15BQ96JP2 1530 aa51.97■■■■■ 5.91
TGIF1-202ENST00000343820 NACADO15069 1562 aa51.88■■■■■ 5.9
TGIF1-202ENST00000343820 RB1CC1Q8TDY2 1594 aa51.61■■■■■ 5.85
TGIF1-202ENST00000343820 SCRIBQ14160 1630 aa51.26■■■■■ 5.8
TGIF1-202ENST00000343820 CHIC1Q5VXU3 224 aa51.25■■■■■ 5.8
TGIF1-202ENST00000343820 UNC13AQ9UPW8 1703 aa50.64■■■■■ 5.7
TGIF1-202ENST00000343820 RSF1Q96T23 1441 aaPredicted RBP50.62■■■■■ 5.69
TGIF1-202ENST00000343820 BICRAQ9NZM4 1560 aa50.07■■■■■ 5.61
TGIF1-202ENST00000343820 CECR2Q9BXF3 1484 aa49.96■■■■■ 5.59
TGIF1-202ENST00000343820 MROH2BQ7Z745 1585 aa49.88■■■■■ 5.57
TGIF1-202ENST00000343820 PABPN1Q86U42 306 aaKnown RBP eCLIP49.87■■■■■ 5.57
TGIF1-202ENST00000343820 WIZO95785 1651 aa49.64■■■■■ 5.54
TGIF1-202ENST00000343820 BAZ1AQ9NRL2 1556 aaPredicted RBP49.56■■■■■ 5.52
TGIF1-202ENST00000343820 LOC105371045A0A1W2PR82 267 aa49.44■■■■■ 5.5
TGIF1-202ENST00000343820 TRIM41Q8WV44 630 aa49.3■■■■■ 5.48
TGIF1-202ENST00000343820 SMARCA4P51532 1647 aa49.19■■■■■ 5.47
TGIF1-202ENST00000343820 TOP2AP11388 1531 aaKnown RBP49.04■■■■■ 5.44
TGIF1-202ENST00000343820 EIF4G1Q04637 1599 aaKnown RBP49.02■■■■■ 5.44
TGIF1-202ENST00000343820 PCGF6Q9BYE7 350 aa49■■■■■ 5.43
TGIF1-202ENST00000343820 HRCP23327 699 aa48.95■■■■■ 5.43
TGIF1-202ENST00000343820 SMARCA2P51531 1590 aa48.69■■■■■ 5.38
TGIF1-202ENST00000343820 CCDC88BA6NC98 1476 aa48.59■■■■■ 5.37
TGIF1-202ENST00000343820 FAM9AQ8IZU1 332 aaPredicted RBP48.55■■■■■ 5.36
TGIF1-202ENST00000343820 TRIM26Q12899 539 aaPredicted RBP48.48■■■■■ 5.35
TGIF1-202ENST00000343820 PEG3Q9GZU2 1588 aa48.44■■■■■ 5.34
TGIF1-202ENST00000343820 ABCC8Q09428 1581 aa48.23■■■■■ 5.31
TGIF1-202ENST00000343820 ATAD2BQ9ULI0 1458 aa48.15■■■■■ 5.3
TGIF1-202ENST00000343820 CC2D2AQ9P2K1 1620 aa48.07■■■■■ 5.29
TGIF1-202ENST00000343820 EHMT2Q96KQ7 1210 aa47.89■■■■■ 5.26
TGIF1-202ENST00000343820 BAZ1BQ9UIG0 1483 aaKnown RBP47.86■■■■■ 5.25
TGIF1-202ENST00000343820 NCAPD3P42695 1498 aa47.84■■■■■ 5.25
TGIF1-202ENST00000343820 HMGXB3Q12766 1538 aa47.78■■■■■ 5.24
TGIF1-202ENST00000343820 EEA1Q15075 1411 aa47.74■■■■■ 5.23
TGIF1-202ENST00000343820 PPARGC1BQ86YN6 1023 aaKnown RBP47.63■■■■■ 5.22
TGIF1-202ENST00000343820 SOGA1O94964 1423 aa47.62■■■■■ 5.21
TGIF1-202ENST00000343820 WRNQ14191 1432 aaPredicted RBP eCLIP47.58■■■■■ 5.213e-13■■■■■ 117
TGIF1-202ENST00000343820 SYNJ1O43426 1573 aa47.42■■■■■ 5.18
TGIF1-202ENST00000343820 TNIKQ9UKE5 1360 aa47.39■■■■■ 5.18
TGIF1-202ENST00000343820 ZEB1P37275 1124 aaPredicted RBP47.39■■■■■ 5.18
TGIF1-202ENST00000343820 RUSC2Q8N2Y8 1516 aa47.38■■■■■ 5.17
TGIF1-202ENST00000343820 DNAJC5BQ9UF47 199 aa47.36■■■■■ 5.17
TGIF1-202ENST00000343820 CSRNP3Q8WYN3 585 aa47.36■■■■■ 5.17
TGIF1-202ENST00000343820 CEP162Q5TB80 1403 aa47.32■■■■■ 5.17
TGIF1-202ENST00000343820 GOLGA3Q08378 1498 aa47.23■■■■■ 5.15
TGIF1-202ENST00000343820 KIF21BO75037 1637 aa47.14■■■■■ 5.14
TGIF1-202ENST00000343820 TOP2BQ02880 1626 aa47.04■■■■■ 5.12
TGIF1-202ENST00000343820 CEP164Q9UPV0 1460 aa47.04■■■■■ 5.12
TGIF1-202ENST00000343820 BIVM-ERCC5R4GMW8 1640 aa46.99■■■■■ 5.11
TGIF1-202ENST00000343820 UBTFP17480 764 aaKnown RBP46.96■■■■■ 5.11
TGIF1-202ENST00000343820 PRDM2Q13029 1718 aa46.64■■■■■ 5.06
TGIF1-202ENST00000343820 CFTRP13569 1480 aa46.6■■■■■ 5.05
TGIF1-202ENST00000343820 RAPGEF2Q9Y4G8 1499 aa46.57■■■■■ 5.04
TGIF1-202ENST00000343820 CADPSQ9ULU8 1353 aa46.56■■■■■ 5.04
TGIF1-202ENST00000343820 CLIP1P30622 1438 aa46.54■■■■■ 5.04
TGIF1-202ENST00000343820 CUX1P39880 1505 aa46.51■■■■■ 5.04
TGIF1-202ENST00000343820 ERICH3Q5RHP9 1530 aa46.47■■■■■ 5.03
TGIF1-202ENST00000343820 NESP48681 1621 aa46.4■■■■■ 5.02
TGIF1-202ENST00000343820 LAMC3Q9Y6N6 1575 aa46.38■■■■■ 5.02
TGIF1-202ENST00000343820 VPS8Q8N3P4 1428 aa46.38■■■■■ 5.02
TGIF1-202ENST00000343820 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP46.34■■■■■ 5.01
TGIF1-202ENST00000343820 PRXQ9BXM0 1461 aa46.34■■■■■ 5.01
TGIF1-202ENST00000343820 TTBK1Q5TCY1 1321 aaPredicted RBP46.31■■■■■ 5
TGIF1-202ENST00000343820 CCER1Q8TC90 406 aaPredicted RBP46.31■■■■■ 5
TGIF1-202ENST00000343820 KIF27Q86VH2 1401 aa46.2■■■■■ 4.99
TGIF1-202ENST00000343820 FANCD2Q9BXW9 1451 aa46.07■■■■■ 4.97
TGIF1-202ENST00000343820 PDS5BQ9NTI5 1447 aa45.99■■■■■ 4.95
TGIF1-202ENST00000343820 APLP2Q06481 763 aa45.94■■■■■ 4.94
TGIF1-202ENST00000343820 KIF21AQ7Z4S6 1674 aa45.93■■■■■ 4.94
TGIF1-202ENST00000343820 ARAP1Q96P48 1450 aa45.91■■■■■ 4.94
TGIF1-202ENST00000343820 RANGAP1P46060 587 aaPredicted RBP45.78■■■■■ 4.92
TGIF1-202ENST00000343820 CUX2O14529 1486 aa45.74■■■■■ 4.91
TGIF1-202ENST00000343820 FGD5Q6ZNL6 1462 aa45.73■■■■■ 4.91
TGIF1-202ENST00000343820 IGF1RP08069 1367 aa45.62■■■■■ 4.89
TGIF1-202ENST00000343820 ERCC6Q03468 1493 aa45.59■■■■■ 4.89
TGIF1-202ENST00000343820 ARHGAP35Q9NRY4 1499 aa45.58■■■■■ 4.89
TGIF1-202ENST00000343820 DNMBPQ6XZF7 1577 aa45.57■■■■■ 4.89
TGIF1-202ENST00000343820 HNRNPUL2Q1KMD3 747 aaKnown RBP45.54■■■■■ 4.88
TGIF1-202ENST00000343820 URB2Q14146 1524 aaKnown RBP45.54■■■■■ 4.88
TGIF1-202ENST00000343820 TOPBP1Q92547 1522 aa45.51■■■■■ 4.88
TGIF1-202ENST00000343820 MRC2Q9UBG0 1479 aa45.47■■■■■ 4.87
TGIF1-202ENST00000343820 CARMIL1Q5VZK9 1371 aa45.43■■■■■ 4.86
TGIF1-202ENST00000343820 THOC2Q8NI27 1593 aaKnown RBP45.33■■■■■ 4.85
TGIF1-202ENST00000343820 ABCA10Q8WWZ4 1543 aa45.32■■■■■ 4.84
TGIF1-202ENST00000343820 KANK4Q5T7N3 995 aaPredicted RBP45.3■■■■■ 4.84
TGIF1-202ENST00000343820 WDR62O43379 1518 aa45.28■■■■■ 4.84
TGIF1-202ENST00000343820 RRBP1Q9P2E9 1410 aaKnown RBP45.28■■■■■ 4.84
TGIF1-202ENST00000343820 POLA1P09884 1462 aaPredicted RBP45.24■■■■■ 4.83
TGIF1-202ENST00000343820 MAP3K1Q13233 1512 aa45.24■■■■■ 4.83
TGIF1-202ENST00000343820 DIEXFQ68CQ4 756 aaKnown RBP45.19■■■■■ 4.82
TGIF1-202ENST00000343820 CUL7Q14999 1698 aa45.18■■■■■ 4.82
TGIF1-202ENST00000343820 RAD54L2Q9Y4B4 1467 aa45.15■■■■■ 4.82
TGIF1-202ENST00000343820 TIAM1Q13009 1591 aa45.14■■■■■ 4.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms