RNA–Protein interactions for RNA: ENST00000592685.5

PDE4A-209, Transcript of phosphodiesterase 4A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDE4A, Length 2,707 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-209ENST00000592685 NISCHQ9Y2I1 1504 aa29.67■■■□□ 2.34
PDE4A-209ENST00000592685 SHROOM4Q9ULL8 1493 aa25.79■■□□□ 1.72
PDE4A-209ENST00000592685 SUPT5HO00267 1087 aaKnown RBP25.31■■□□□ 1.64
PDE4A-209ENST00000592685 ZCCHC6Q5VYS8 1495 aaKnown RBP25.1■■□□□ 1.61
PDE4A-209ENST00000592685 DCAF8L2P0C7V8 631 aa25■■□□□ 1.59
PDE4A-209ENST00000592685 CCDC180Q9P1Z9 1646 aa24.97■■□□□ 1.59
PDE4A-209ENST00000592685 MYO15BQ96JP2 1530 aa24.5■■□□□ 1.51
PDE4A-209ENST00000592685 CHIC1Q5VXU3 224 aa24.49■■□□□ 1.51
PDE4A-209ENST00000592685 DCAF1Q9Y4B6 1507 aa24.13■■□□□ 1.45
PDE4A-209ENST00000592685 PCGF6Q9BYE7 350 aa23.98■■□□□ 1.43
PDE4A-209ENST00000592685 LOC105371045A0A1W2PR82 267 aa23.95■■□□□ 1.42
PDE4A-209ENST00000592685 HRCP23327 699 aa23.89■■□□□ 1.42
PDE4A-209ENST00000592685 SCRIBQ14160 1630 aa23.76■■□□□ 1.39
PDE4A-209ENST00000592685 ABCC9O60706 1549 aa23.69■■□□□ 1.38
PDE4A-209ENST00000592685 PPARGC1BQ86YN6 1023 aaKnown RBP23.65■■□□□ 1.38
PDE4A-209ENST00000592685 RSF1Q96T23 1441 aaPredicted RBP23.61■■□□□ 1.37
PDE4A-209ENST00000592685 FAM9AQ8IZU1 332 aaPredicted RBP23.46■■□□□ 1.35
PDE4A-209ENST00000592685 RB1CC1Q8TDY2 1594 aa23.43■■□□□ 1.34
PDE4A-209ENST00000592685 TRIM41Q8WV44 630 aa23.42■■□□□ 1.34
PDE4A-209ENST00000592685 EHMT2Q96KQ7 1210 aa23.42■■□□□ 1.34
PDE4A-209ENST00000592685 CECR2Q9BXF3 1484 aa23.32■■□□□ 1.32
PDE4A-209ENST00000592685 TRIM26Q12899 539 aaPredicted RBP23.3■■□□□ 1.32
PDE4A-209ENST00000592685 MROH2BQ7Z745 1585 aa23.18■■□□□ 1.3
PDE4A-209ENST00000592685 NACADO15069 1562 aa23.13■■□□□ 1.29
PDE4A-209ENST00000592685 WIZO95785 1651 aa23.06■■□□□ 1.28
PDE4A-209ENST00000592685 BAZ1AQ9NRL2 1556 aaPredicted RBP22.78■■□□□ 1.24
PDE4A-209ENST00000592685 ZEB1P37275 1124 aaPredicted RBP22.69■■□□□ 1.22
PDE4A-209ENST00000592685 ABCC8Q09428 1581 aa22.68■■□□□ 1.22
PDE4A-209ENST00000592685 EIF4G1Q04637 1599 aaKnown RBP22.66■■□□□ 1.22
PDE4A-209ENST00000592685 TTBK1Q5TCY1 1321 aaPredicted RBP22.66■■□□□ 1.22
PDE4A-209ENST00000592685 CCDC88BA6NC98 1476 aa22.6■■□□□ 1.21
PDE4A-209ENST00000592685 PABPN1Q86U42 306 aaKnown RBP eCLIP22.58■■□□□ 1.21
PDE4A-209ENST00000592685 SMARCA4P51532 1647 aa22.57■■□□□ 1.2
PDE4A-209ENST00000592685 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.57■■□□□ 1.2
PDE4A-209ENST00000592685 TOP2AP11388 1531 aaKnown RBP22.56■■□□□ 1.2
PDE4A-209ENST00000592685 SMARCA2P51531 1590 aa22.5■■□□□ 1.19
PDE4A-209ENST00000592685 UNC13AQ9UPW8 1703 aa22.5■■□□□ 1.19
PDE4A-209ENST00000592685 SOGA1O94964 1423 aa22.49■■□□□ 1.19
PDE4A-209ENST00000592685 CCER1Q8TC90 406 aaPredicted RBP22.42■■□□□ 1.18
PDE4A-209ENST00000592685 RUSC2Q8N2Y8 1516 aa22.4■■□□□ 1.18
PDE4A-209ENST00000592685 CEP162Q5TB80 1403 aa22.36■■□□□ 1.17
PDE4A-209ENST00000592685 UBTFP17480 764 aaKnown RBP22.34■■□□□ 1.17
PDE4A-209ENST00000592685 CSRNP3Q8WYN3 585 aa22.3■■□□□ 1.16
PDE4A-209ENST00000592685 BICRAQ9NZM4 1560 aa22.25■■□□□ 1.15
PDE4A-209ENST00000592685 TNIKQ9UKE5 1360 aa22.22■■□□□ 1.15
PDE4A-209ENST00000592685 WRNQ14191 1432 aaPredicted RBP eCLIP22.21■■□□□ 1.15
PDE4A-209ENST00000592685 SCAF1Q9H7N4 1312 aaKnown RBP22.19■■□□□ 1.14
PDE4A-209ENST00000592685 RANGAP1P46060 587 aaPredicted RBP22.11■■□□□ 1.13
PDE4A-209ENST00000592685 EEA1Q15075 1411 aa22.1■■□□□ 1.13
PDE4A-209ENST00000592685 GOLGA3Q08378 1498 aa22.08■■□□□ 1.13
PDE4A-209ENST00000592685 SYNJ1O43426 1573 aa22.07■■□□□ 1.12
PDE4A-209ENST00000592685 ATAD2BQ9ULI0 1458 aa22.01■■□□□ 1.11
PDE4A-209ENST00000592685 PEG3Q9GZU2 1588 aa22■■□□□ 1.11
PDE4A-209ENST00000592685 DIEXFQ68CQ4 756 aaKnown RBP22■■□□□ 1.11
PDE4A-209ENST00000592685 HNRNPUL2Q1KMD3 747 aaKnown RBP21.99■■□□□ 1.11
PDE4A-209ENST00000592685 BAZ1BQ9UIG0 1483 aaKnown RBP21.97■■□□□ 1.11
PDE4A-209ENST00000592685 CEP164Q9UPV0 1460 aa21.93■■□□□ 1.1
PDE4A-209ENST00000592685 NEUROD1Q13562 356 aa21.92■■□□□ 1.1
PDE4A-209ENST00000592685 CLIP1P30622 1438 aa21.92■■□□□ 1.1
PDE4A-209ENST00000592685 RAPGEF2Q9Y4G8 1499 aa21.9■■□□□ 1.1
PDE4A-209ENST00000592685 ACIN1Q9UKV3 1341 aaKnown RBP21.85■■□□□ 1.09
PDE4A-209ENST00000592685 KIF21BO75037 1637 aa21.82■■□□□ 1.08
PDE4A-209ENST00000592685 VPS8Q8N3P4 1428 aa21.78■■□□□ 1.08
PDE4A-209ENST00000592685 APLP2Q06481 763 aa21.77■■□□□ 1.08
PDE4A-209ENST00000592685 ZNF316A6NFI3 1004 aaPredicted RBP21.74■■□□□ 1.07
PDE4A-209ENST00000592685 GTF3C3Q9Y5Q9 886 aa21.69■■□□□ 1.06
PDE4A-209ENST00000592685 YTHDC1Q96MU7 727 aaKnown RBP21.69■■□□□ 1.06
PDE4A-209ENST00000592685 TOP2BQ02880 1626 aa21.67■■□□□ 1.06
PDE4A-209ENST00000592685 CENPBP07199 599 aaPredicted RBP21.64■■□□□ 1.05
PDE4A-209ENST00000592685 KANK4Q5T7N3 995 aaPredicted RBP21.59■■□□□ 1.05
PDE4A-209ENST00000592685 MIER1Q8N108 512 aa21.57■■□□□ 1.04
PDE4A-209ENST00000592685 CUX1P39880 1505 aa21.54■■□□□ 1.04
PDE4A-209ENST00000592685 BIVM-ERCC5R4GMW8 1640 aa21.54■■□□□ 1.04
PDE4A-209ENST00000592685 PRXQ9BXM0 1461 aa21.54■■□□□ 1.04
PDE4A-209ENST00000592685 ARAP1Q96P48 1450 aa21.53■■□□□ 1.04
PDE4A-209ENST00000592685 NCAPD3P42695 1498 aa21.48■■□□□ 1.03
PDE4A-209ENST00000592685 PELP1Q8IZL8 1130 aaKnown RBP21.48■■□□□ 1.03
PDE4A-209ENST00000592685 ERICH3Q5RHP9 1530 aa21.44■■□□□ 1.02
PDE4A-209ENST00000592685 KIF27Q86VH2 1401 aa21.43■■□□□ 1.02
PDE4A-209ENST00000592685 ITGAEP38570 1179 aa21.43■■□□□ 1.02
PDE4A-209ENST00000592685 HMGXB3Q12766 1538 aa21.42■■□□□ 1.02
PDE4A-209ENST00000592685 DHX57Q6P158 1386 aaKnown RBP21.39■■□□□ 1.01
PDE4A-209ENST00000592685 CFTRP13569 1480 aa21.38■■□□□ 1.01
PDE4A-209ENST00000592685 ARHGAP35Q9NRY4 1499 aa21.33■■□□□ 1.01
PDE4A-209ENST00000592685 CUX2O14529 1486 aa21.29■■□□□ 1
PDE4A-209ENST00000592685 IGF1RP08069 1367 aa21.25■□□□□ 0.99
PDE4A-209ENST00000592685 RRBP1Q9P2E9 1410 aaKnown RBP21.25■□□□□ 0.99
PDE4A-209ENST00000592685 CCNB3Q8WWL7 1395 aa21.24■□□□□ 0.99
PDE4A-209ENST00000592685 P3H3Q8IVL6 736 aa21.23■□□□□ 0.99
PDE4A-209ENST00000592685 CLSPNQ9HAW4 1339 aa21.18■□□□□ 0.98
PDE4A-209ENST00000592685 ATP1B4Q9UN42 357 aaPredicted RBP21.18■□□□□ 0.98
PDE4A-209ENST00000592685 CARMIL1Q5VZK9 1371 aa21.16■□□□□ 0.98
PDE4A-209ENST00000592685 CADPSQ9ULU8 1353 aa21.16■□□□□ 0.98
PDE4A-209ENST00000592685 FGD5Q6ZNL6 1462 aa21.16■□□□□ 0.98
PDE4A-209ENST00000592685 RAB3GAP2Q9H2M9 1393 aa21.11■□□□□ 0.97
PDE4A-209ENST00000592685 FAM50AQ14320 339 aaKnown RBP21.09■□□□□ 0.97
PDE4A-209ENST00000592685 PHLDB1Q86UU1 1377 aa21.07■□□□□ 0.96
PDE4A-209ENST00000592685 TIAM1Q13009 1591 aa21.05■□□□□ 0.96
PDE4A-209ENST00000592685 RAD54L2Q9Y4B4 1467 aa21.03■□□□□ 0.96
PDE4A-209ENST00000592685 PRDM2Q13029 1718 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms