Protein–RNA interactions for Protein: Q86U42

PABPN1, Polyadenylate-binding protein 2, humanhuman

Known RBP eCLIP

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1Q86U42 PHKA2-205ENST00000473597 514 ntTSL 223.37■■□□□ 1.339e-11■■□□□ 14.3
PABPN1Q86U42 LAMA5-203ENST00000370691 3160 ntTSL 1 (best)23.15■■□□□ 1.32e-7■■□□□ 14.3
PABPN1Q86U42 RHOT2-205ENST00000562333 1052 ntTSL 539.97■■■■□ 3.996e-7■■□□□ 14.3
PABPN1Q86U42 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.852e-10■■□□□ 14.3
PABPN1Q86U42 CDK5RAP3-236ENST00000584991 1862 ntTSL 526.62■■□□□ 1.852e-10■■□□□ 14.3
PABPN1Q86U42 CDK5RAP3-218ENST00000580391 1957 ntTSL 526.06■■□□□ 1.762e-10■■□□□ 14.3
PABPN1Q86U42 CDK5RAP3-219ENST00000580670 1768 ntTSL 525.27■■□□□ 1.642e-10■■□□□ 14.3
PABPN1Q86U42 CDK5RAP3-202ENST00000536708 1975 ntTSL 2 BASIC23.41■■□□□ 1.342e-10■■□□□ 14.3
PABPN1Q86U42 CDK5RAP3-217ENST00000580287 2609 ntTSL 1 (best)22.72■■□□□ 1.232e-10■■□□□ 14.3
PABPN1Q86U42 CDK5RAP3-237ENST00000585163 2519 ntTSL 1 (best)21.84■■□□□ 1.092e-10■■□□□ 14.3
PABPN1Q86U42 AC018521.1-202ENST00000641877 2655 ntBASIC20.65■□□□□ 0.92e-10■■□□□ 14.3
PABPN1Q86U42 CDK5RAP3-232ENST00000584168 2684 ntTSL 519.54■□□□□ 0.722e-10■■□□□ 14.3
PABPN1Q86U42 CDK5RAP3-231ENST00000584063 2759 ntTSL 1 (best)19.12■□□□□ 0.652e-10■■□□□ 14.3
PABPN1Q86U42 CDK5RAP3-229ENST00000583697 852 ntTSL 318.07■□□□□ 0.482e-10■■□□□ 14.3
PABPN1Q86U42 AMDHD2-210ENST00000565570 1844 ntTSL 533.41■■■□□ 2.941e-6■■□□□ 14.3
PABPN1Q86U42 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC21.7■■□□□ 1.061e-6■■□□□ 14.3
PABPN1Q86U42 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC22.67■■□□□ 1.229e-10■■□□□ 14.3
PABPN1Q86U42 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.229e-10■■□□□ 14.3
PABPN1Q86U42 CYTH2-213ENST00000620214 2020 ntTSL 5 BASIC22.13■■□□□ 1.139e-10■■□□□ 14.3
PABPN1Q86U42 PHKA2-203ENST00000469485 1945 ntTSL 228.53■■■□□ 2.168e-11■■□□□ 14.3
PABPN1Q86U42 COL9A3-211ENST00000477612 635 ntTSL 344■■■■■ 4.634e-10■■□□□ 14.3
PABPN1Q86U42 NEK3-209ENST00000618856 544 ntTSL 516.38■□□□□ 0.214e-7■■□□□ 14.2
PABPN1Q86U42 STK36-204ENST00000419433 2093 ntTSL 218.72■□□□□ 0.594e-7■■□□□ 14.2
PABPN1Q86U42 STK36-207ENST00000440309 4721 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.284e-7■■□□□ 14.2
PABPN1Q86U42 STK36-201ENST00000295709 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 04e-7■■□□□ 14.2
PABPN1Q86U42 STK36-202ENST00000392105 4821 ntTSL 1 (best) BASIC14.96□□□□□ -0.014e-7■■□□□ 14.2
PABPN1Q86U42 SF3B2-216ENST00000534765 3932 ntTSL 215.43■□□□□ 0.062e-10■■□□□ 14.2
PABPN1Q86U42 NME4-204ENST00000433358 966 ntTSL 347.7■■■■■ 5.231e-8■■□□□ 14.2
PABPN1Q86U42 NME4-206ENST00000448828 1167 ntTSL 246.23■■■■■ 4.991e-8■■□□□ 14.2
PABPN1Q86U42 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC45.11■■■■■ 4.811e-8■■□□□ 14.2
PABPN1Q86U42 NME4-209ENST00000460297 1652 ntTSL 544.62■■■■■ 4.731e-8■■□□□ 14.2
PABPN1Q86U42 NME4-202ENST00000382940 766 ntTSL 3 BASIC43.9■■■■■ 4.621e-8■■□□□ 14.2
PABPN1Q86U42 NME4-211ENST00000620944 1193 ntTSL 2 BASIC43.9■■■■■ 4.621e-8■■□□□ 14.2
PABPN1Q86U42 NME4-205ENST00000444498 1111 ntTSL 337.69■■■■□ 3.621e-8■■□□□ 14.2
PABPN1Q86U42 NME4-212ENST00000621774 904 ntTSL 3 BASIC36.74■■■■□ 3.471e-8■■□□□ 14.2
PABPN1Q86U42 NME4-210ENST00000468031 1861 ntTSL 231.34■■■□□ 2.611e-8■■□□□ 14.2
PABPN1Q86U42 NME4-207ENST00000450036 985 ntTSL 3 BASIC30.87■■■□□ 2.531e-8■■□□□ 14.2
PABPN1Q86U42 NME4-203ENST00000397722 1232 ntTSL 2 BASIC27.92■■■□□ 2.061e-8■■□□□ 14.2
PABPN1Q86U42 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC25.07■■□□□ 1.62e-7■■□□□ 14.2
PABPN1Q86U42 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.272e-7■■□□□ 14.2
PABPN1Q86U42 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.192e-7■■□□□ 14.2
PABPN1Q86U42 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.082e-7■■□□□ 14.2
PABPN1Q86U42 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.042e-7■■□□□ 14.2
PABPN1Q86U42 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.842e-7■■□□□ 14.2
PABPN1Q86U42 ARHGAP45-209ENST00000587602 3875 ntTSL 219.88■□□□□ 0.772e-7■■□□□ 14.2
PABPN1Q86U42 PSME2-208ENST00000559359 484 ntTSL 221.37■■□□□ 1.016e-11■■□□□ 14.2
PABPN1Q86U42 SLC26A6-218ENST00000482282 1029 ntTSL 529.28■■■□□ 2.284e-8■■□□□ 14.2
PABPN1Q86U42 SGSM2-211ENST00000574563 3410 ntTSL 2 BASIC19.84■□□□□ 0.773e-6■■□□□ 14.2
PABPN1Q86U42 SLC38A5-201ENST00000413668 741 ntTSL 225.71■■□□□ 1.712e-6■■□□□ 14.2
PABPN1Q86U42 SLC38A5-202ENST00000416711 708 ntTSL 525.3■■□□□ 1.642e-6■■□□□ 14.2
PABPN1Q86U42 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC36.47■■■■□ 3.431e-6■■□□□ 14.2
PABPN1Q86U42 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC28.74■■■□□ 2.191e-6■■□□□ 14.2
PABPN1Q86U42 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC27.09■■□□□ 1.931e-6■■□□□ 14.2
PABPN1Q86U42 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.861e-6■■□□□ 14.2
PABPN1Q86U42 DDX42-215ENST00000582985 543 ntTSL 420.17■□□□□ 0.821e-6■■□□□ 14.2
PABPN1Q86U42 DDX42-214ENST00000581767 2244 nt17.53■□□□□ 0.41e-6■■□□□ 14.2
PABPN1Q86U42 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC14.28□□□□□ -0.121e-6■■□□□ 14.2
PABPN1Q86U42 DDX42-217ENST00000584010 3929 ntTSL 212.6□□□□□ -0.391e-6■■□□□ 14.2
PABPN1Q86U42 DDX42-207ENST00000578593 2919 ntTSL 211□□□□□ -0.651e-6■■□□□ 14.2
PABPN1Q86U42 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC37.24■■■■□ 3.552e-6■■□□□ 14.2
PABPN1Q86U42 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC36.25■■■■□ 3.392e-6■■□□□ 14.2
PABPN1Q86U42 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.292e-6■■□□□ 14.2
PABPN1Q86U42 AKT1-218ENST00000557552 8396 ntTSL 522.07■■□□□ 1.122e-6■■□□□ 14.2
PABPN1Q86U42 AKT1-208ENST00000554581 3916 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.562e-6■■□□□ 14.2
PABPN1Q86U42 AKT1-202ENST00000402615 3913 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.492e-6■■□□□ 14.2
PABPN1Q86U42 ASPSCR1-210ENST00000581608 2387 ntTSL 232.76■■■□□ 2.843e-9■■□□□ 14.2
PABPN1Q86U42 ASPSCR1-204ENST00000577733 5503 ntTSL 224.27■■□□□ 1.483e-9■■□□□ 14.2
PABPN1Q86U42 ASPSCR1-205ENST00000578236 3277 ntTSL 222.03■■□□□ 1.123e-9■■□□□ 14.2
PABPN1Q86U42 BRD2-209ENST00000469132 1628 ntTSL 236.24■■■■□ 3.394e-8■■□□□ 14.2
PABPN1Q86U42 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC34.97■■■■□ 3.191e-6■■□□□ 14.2
PABPN1Q86U42 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.951e-6■■□□□ 14.2
PABPN1Q86U42 TRIM28-207ENST00000597136 1552 ntTSL 229.13■■■□□ 2.251e-6■■□□□ 14.2
PABPN1Q86U42 VCP-207ENST00000493886 2942 ntTSL 222.78■■□□□ 1.241e-12■■□□□ 14.2
PABPN1Q86U42 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.194e-8■■□□□ 14.2
PABPN1Q86U42 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.94e-8■■□□□ 14.2
PABPN1Q86U42 BRD2-212ENST00000482914 4834 ntTSL 1 (best)20.38■□□□□ 0.854e-8■■□□□ 14.2
PABPN1Q86U42 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.741e-12■■□□□ 14.2
PABPN1Q86U42 BRD2-204ENST00000449025 3210 ntAPPRIS ALT2 TSL 1 (best)19.5■□□□□ 0.714e-8■■□□□ 14.2
PABPN1Q86U42 BRD2-205ENST00000449085 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.714e-8■■□□□ 14.2
PABPN1Q86U42 BRD2-203ENST00000395287 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.424e-8■■□□□ 14.2
PABPN1Q86U42 AC105402.3-201ENST00000601658 784 ntTSL 5 BASIC22.43■■□□□ 1.182e-9■■□□□ 14.2
PABPN1Q86U42 AC105402.3-202ENST00000446781 2592 ntTSL 5 BASIC18.8■□□□□ 0.62e-9■■□□□ 14.2
PABPN1Q86U42 STAT6-222ENST00000557563 871 ntTSL 238.97■■■■□ 3.831e-7■■□□□ 14.2
PABPN1Q86U42 DUS1L-204ENST00000542088 1040 ntTSL 338.39■■■■□ 3.744e-7■■□□□ 14.2
PABPN1Q86U42 DUS1L-203ENST00000538833 1250 ntTSL 1 (best)35.33■■■■□ 3.254e-7■■□□□ 14.2
PABPN1Q86U42 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.784e-7■■□□□ 14.2
PABPN1Q86U42 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.554e-7■■□□□ 14.2
PABPN1Q86U42 DUS1L-205ENST00000577574 473 ntTSL 529.91■■■□□ 2.384e-7■■□□□ 14.2
PABPN1Q86U42 DUS1L-212ENST00000579854 657 ntTSL 228.46■■■□□ 2.154e-7■■□□□ 14.2
PABPN1Q86U42 DUS1L-216ENST00000584871 676 ntTSL 225.28■■□□□ 1.644e-7■■□□□ 14.2
PABPN1Q86U42 DUS1L-210ENST00000578846 4456 ntTSL 222.15■■□□□ 1.144e-7■■□□□ 14.2
PABPN1Q86U42 COL6A1-204ENST00000486023 968 ntTSL 235.69■■■■□ 3.31e-11■■□□□ 14.2
PABPN1Q86U42 SORBS3-208ENST00000520207 576 ntTSL 240.88■■■■■ 4.134e-7■■□□□ 14.1
PABPN1Q86U42 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.217e-7■■□□□ 14.1
PABPN1Q86U42 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.652e-7■■□□□ 14.1
PABPN1Q86U42 RNF31-222ENST00000560631 320 ntTSL 215.66■□□□□ 0.11e-9■■□□□ 14.1
PABPN1Q86U42 EEF1D-235ENST00000530848 688 ntTSL 339.47■■■■□ 3.912e-7■■□□□ 14.1
PABPN1Q86U42 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC31.32■■■□□ 2.66e-7■■□□□ 14.1
PABPN1Q86U42 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC30.25■■■□□ 2.436e-7■■□□□ 14.1
PABPN1Q86U42 CLASRP-202ENST00000391952 2213 ntTSL 1 (best)26.62■■□□□ 1.856e-7■■□□□ 14.1
Retrieved 100 of 8,254 protein–RNA pairs in 180.4 ms