RNA–Protein interactions for RNA: ENST00000389924.6

DDX42-202, Transcript of DEAD-box helicase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene DDX42, Length 3,939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-202ENST00000389924 NISCHQ9Y2I1 1504 aa34.21■■■■□ 3.07
DDX42-202ENST00000389924 SHROOM4Q9ULL8 1493 aa31.55■■■□□ 2.64
DDX42-202ENST00000389924 SUPT5HO00267 1087 aaKnown RBP31.47■■■□□ 2.63
DDX42-202ENST00000389924 DCAF8L2P0C7V8 631 aa31.24■■■□□ 2.59
DDX42-202ENST00000389924 PCGF6Q9BYE7 350 aa30.19■■■□□ 2.42
DDX42-202ENST00000389924 EHMT2Q96KQ7 1210 aa29.76■■■□□ 2.35
DDX42-202ENST00000389924 CHIC1Q5VXU3 224 aa29.7■■■□□ 2.35
DDX42-202ENST00000389924 HRCP23327 699 aa29.68■■■□□ 2.34
DDX42-202ENST00000389924 PPARGC1BQ86YN6 1023 aaKnown RBP29.58■■■□□ 2.33
DDX42-202ENST00000389924 LOC105371045A0A1W2PR82 267 aa29.48■■■□□ 2.31
DDX42-202ENST00000389924 FAM9AQ8IZU1 332 aaPredicted RBP29.39■■■□□ 2.29
DDX42-202ENST00000389924 MYO15BQ96JP2 1530 aa29.05■■■□□ 2.24
DDX42-202ENST00000389924 TRIM41Q8WV44 630 aa28.9■■■□□ 2.22
DDX42-202ENST00000389924 TRIM26Q12899 539 aaPredicted RBP28.87■■■□□ 2.21
DDX42-202ENST00000389924 TTBK1Q5TCY1 1321 aaPredicted RBP28.8■■■□□ 2.2
DDX42-202ENST00000389924 ZCCHC6Q5VYS8 1495 aaKnown RBP28.76■■■□□ 2.19
DDX42-202ENST00000389924 ZEB1P37275 1124 aaPredicted RBP28.5■■■□□ 2.15
DDX42-202ENST00000389924 CCER1Q8TC90 406 aaPredicted RBP28.37■■■□□ 2.13
DDX42-202ENST00000389924 DCAF1Q9Y4B6 1507 aa28.19■■■□□ 2.1
DDX42-202ENST00000389924 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.17■■■□□ 2.1
DDX42-202ENST00000389924 CCDC180Q9P1Z9 1646 aa28■■■□□ 2.07
DDX42-202ENST00000389924 RANGAP1P46060 587 aaPredicted RBP27.94■■■□□ 2.06
DDX42-202ENST00000389924 YTHDC1Q96MU7 727 aaKnown RBP27.91■■■□□ 2.06
DDX42-202ENST00000389924 PELP1Q8IZL8 1130 aaKnown RBP27.89■■■□□ 2.05
DDX42-202ENST00000389924 UBTFP17480 764 aaKnown RBP27.87■■■□□ 2.05
DDX42-202ENST00000389924 CENPBP07199 599 aaPredicted RBP27.83■■■□□ 2.05
DDX42-202ENST00000389924 SCAF1Q9H7N4 1312 aaKnown RBP27.74■■■□□ 2.03
DDX42-202ENST00000389924 DIEXFQ68CQ4 756 aaKnown RBP27.68■■■□□ 2.02
DDX42-202ENST00000389924 SCRIBQ14160 1630 aa27.67■■■□□ 2.02
DDX42-202ENST00000389924 APLP2Q06481 763 aa27.6■■■□□ 2.01
DDX42-202ENST00000389924 RSF1Q96T23 1441 aaPredicted RBP27.59■■■□□ 2.01
DDX42-202ENST00000389924 HNRNPUL2Q1KMD3 747 aaKnown RBP27.56■■■□□ 2
DDX42-202ENST00000389924 GTF3C3Q9Y5Q9 886 aa27.55■■■□□ 2
DDX42-202ENST00000389924 ABCC9O60706 1549 aa27.54■■■□□ 2
DDX42-202ENST00000389924 NEUROD1Q13562 356 aa27.45■■□□□ 1.98
DDX42-202ENST00000389924 ACIN1Q9UKV3 1341 aaKnown RBP27.44■■□□□ 1.98
DDX42-202ENST00000389924 RB1CC1Q8TDY2 1594 aa27.22■■□□□ 1.95
DDX42-202ENST00000389924 CECR2Q9BXF3 1484 aa27.13■■□□□ 1.93
DDX42-202ENST00000389924 ZNF316A6NFI3 1004 aaPredicted RBP27.1■■□□□ 1.93
DDX42-202ENST00000389924 PABPN1Q86U42 306 aaKnown RBP eCLIP27.09■■□□□ 1.931e-6■■□□□ 14.2
DDX42-202ENST00000389924 ITGAEP38570 1179 aa27.04■■□□□ 1.92
DDX42-202ENST00000389924 CSRNP3Q8WYN3 585 aa27.04■■□□□ 1.92
DDX42-202ENST00000389924 MIER1Q8N108 512 aa26.85■■□□□ 1.89
DDX42-202ENST00000389924 ATP1B4Q9UN42 357 aaPredicted RBP26.85■■□□□ 1.89
DDX42-202ENST00000389924 MROH2BQ7Z745 1585 aa26.84■■□□□ 1.89
DDX42-202ENST00000389924 CEP162Q5TB80 1403 aa26.79■■□□□ 1.88
DDX42-202ENST00000389924 SOGA1O94964 1423 aa26.68■■□□□ 1.86
DDX42-202ENST00000389924 ABCC8Q09428 1581 aa26.63■■□□□ 1.85
DDX42-202ENST00000389924 MYT1Q01538 1121 aa26.62■■□□□ 1.85
DDX42-202ENST00000389924 WIZO95785 1651 aa26.62■■□□□ 1.85
DDX42-202ENST00000389924 CCDC88BA6NC98 1476 aa26.61■■□□□ 1.85
DDX42-202ENST00000389924 BCANQ96GW7 911 aa26.54■■□□□ 1.84
DDX42-202ENST00000389924 TNIKQ9UKE5 1360 aa26.49■■□□□ 1.83
DDX42-202ENST00000389924 NACADO15069 1562 aa26.39■■□□□ 1.82
DDX42-202ENST00000389924 CLIP1P30622 1438 aa26.39■■□□□ 1.82
DDX42-202ENST00000389924 RUSC2Q8N2Y8 1516 aa26.38■■□□□ 1.81
DDX42-202ENST00000389924 NEFLP07196 543 aa26.32■■□□□ 1.8
DDX42-202ENST00000389924 FAM50AQ14320 339 aaKnown RBP26.32■■□□□ 1.8
DDX42-202ENST00000389924 GOLGA3Q08378 1498 aa26.32■■□□□ 1.8
DDX42-202ENST00000389924 BAZ1AQ9NRL2 1556 aaPredicted RBP26.31■■□□□ 1.8
DDX42-202ENST00000389924 WRNQ14191 1432 aaPredicted RBP eCLIP26.27■■□□□ 1.8
DDX42-202ENST00000389924 P3H3Q8IVL6 736 aa26.21■■□□□ 1.79
DDX42-202ENST00000389924 EEA1Q15075 1411 aa26.19■■□□□ 1.78
DDX42-202ENST00000389924 HIRIP3Q9BW71 556 aaPredicted RBP26.16■■□□□ 1.78
DDX42-202ENST00000389924 DDX10Q13206 875 aaKnown RBP26.14■■□□□ 1.77
DDX42-202ENST00000389924 CNGB1Q14028 1251 aaPredicted RBP26.08■■□□□ 1.77
DDX42-202ENST00000389924 CEP164Q9UPV0 1460 aa26.06■■□□□ 1.76
DDX42-202ENST00000389924 FKBP8Q14318 412 aa26.05■■□□□ 1.76
DDX42-202ENST00000389924 KANK4Q5T7N3 995 aaPredicted RBP26.04■■□□□ 1.76
DDX42-202ENST00000389924 SUPT16HQ9Y5B9 1047 aaKnown RBP26■■□□□ 1.75
DDX42-202ENST00000389924 ERICH6Q7L0X2 663 aa26■■□□□ 1.75
DDX42-202ENST00000389924 TRIM52Q96A61 297 aa25.99■■□□□ 1.75
DDX42-202ENST00000389924 TOP2AP11388 1531 aaKnown RBP25.99■■□□□ 1.75
DDX42-202ENST00000389924 VPS8Q8N3P4 1428 aa25.94■■□□□ 1.74
DDX42-202ENST00000389924 KCNH8Q96L42 1107 aa25.89■■□□□ 1.73
DDX42-202ENST00000389924 ANP32CO43423 234 aa25.88■■□□□ 1.73
DDX42-202ENST00000389924 SIN3AQ96ST3 1273 aa25.87■■□□□ 1.73
DDX42-202ENST00000389924 RAPGEF2Q9Y4G8 1499 aa25.86■■□□□ 1.73
DDX42-202ENST00000389924 SMARCA2P51531 1590 aa25.84■■□□□ 1.73
DDX42-202ENST00000389924 POLR3GLQ9BT43 218 aa25.81■■□□□ 1.72
DDX42-202ENST00000389924 SMARCA4P51532 1647 aa25.81■■□□□ 1.72
DDX42-202ENST00000389924 BAZ1BQ9UIG0 1483 aaKnown RBP25.75■■□□□ 1.71
DDX42-202ENST00000389924 IRX6P78412 446 aaPredicted RBP25.72■■□□□ 1.71
DDX42-202ENST00000389924 DHX57Q6P158 1386 aaKnown RBP25.71■■□□□ 1.71
DDX42-202ENST00000389924 CLSPNQ9HAW4 1339 aa25.71■■□□□ 1.71
DDX42-202ENST00000389924 ARID3CA6NKF2 412 aa25.68■■□□□ 1.7
DDX42-202ENST00000389924 CCNB3Q8WWL7 1395 aa25.65■■□□□ 1.7
DDX42-202ENST00000389924 TSHZ2Q9NRE2 1034 aa25.63■■□□□ 1.69
DDX42-202ENST00000389924 HNRNPUQ00839 825 aaKnown RBP eCLIP25.62■■□□□ 1.69
DDX42-202ENST00000389924 TONSLQ96HA7 1378 aa25.56■■□□□ 1.68
DDX42-202ENST00000389924 KIF27Q86VH2 1401 aa25.53■■□□□ 1.68
DDX42-202ENST00000389924 RAB3GAP2Q9H2M9 1393 aa25.53■■□□□ 1.68
DDX42-202ENST00000389924 ANP32EQ9BTT0 268 aa25.52■■□□□ 1.68
DDX42-202ENST00000389924 CHIC2Q9UKJ5 165 aa25.52■■□□□ 1.68
DDX42-202ENST00000389924 SYNJ1O43426 1573 aa25.49■■□□□ 1.67
DDX42-202ENST00000389924 CDK11AQ9UQ88 783 aaPredicted RBP25.49■■□□□ 1.67
DDX42-202ENST00000389924 KIF21BO75037 1637 aa25.46■■□□□ 1.67
DDX42-202ENST00000389924 FAM9BQ8IZU0 186 aa25.44■■□□□ 1.66
DDX42-202ENST00000389924 ZNF326Q5BKZ1 582 aaKnown RBP25.43■■□□□ 1.66
DDX42-202ENST00000389924 SENP3-EIF4A1A0A087X0R7 540 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms