RNA–Protein interactions for RNA: ENST00000391952.7

CLASRP-202, Transcript of CLK4 associating serine/arginine rich protein, humanhuman

TSL 1 (best)

Gene CLASRP, Length 2,213 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLASRP-202ENST00000391952 NISCHQ9Y2I1 1504 aa33.97■■■■□ 3.03
CLASRP-202ENST00000391952 CCDC180Q9P1Z9 1646 aa29.24■■■□□ 2.27
CLASRP-202ENST00000391952 ZCCHC6Q5VYS8 1495 aaKnown RBP28.68■■■□□ 2.18
CLASRP-202ENST00000391952 ABCC9O60706 1549 aa28.37■■■□□ 2.13
CLASRP-202ENST00000391952 SHROOM4Q9ULL8 1493 aa28.34■■■□□ 2.13
CLASRP-202ENST00000391952 DCAF1Q9Y4B6 1507 aa28.02■■■□□ 2.08
CLASRP-202ENST00000391952 DCAF8L2P0C7V8 631 aa27.89■■■□□ 2.06
CLASRP-202ENST00000391952 SUPT5HO00267 1087 aaKnown RBP27.59■■■□□ 2.01
CLASRP-202ENST00000391952 NACADO15069 1562 aa27.41■■□□□ 1.98
CLASRP-202ENST00000391952 MYO15BQ96JP2 1530 aa27.4■■□□□ 1.98
CLASRP-202ENST00000391952 RB1CC1Q8TDY2 1594 aa27.36■■□□□ 1.97
CLASRP-202ENST00000391952 SCRIBQ14160 1630 aa27.08■■□□□ 1.93
CLASRP-202ENST00000391952 UNC13AQ9UPW8 1703 aa26.8■■□□□ 1.88
CLASRP-202ENST00000391952 CHIC1Q5VXU3 224 aa26.79■■□□□ 1.88
CLASRP-202ENST00000391952 RSF1Q96T23 1441 aaPredicted RBP26.67■■□□□ 1.86
CLASRP-202ENST00000391952 PABPN1Q86U42 306 aaKnown RBP eCLIP26.62■■□□□ 1.856e-7■■□□□ 14.1
CLASRP-202ENST00000391952 BICRAQ9NZM4 1560 aa26.58■■□□□ 1.84
CLASRP-202ENST00000391952 CECR2Q9BXF3 1484 aa26.43■■□□□ 1.82
CLASRP-202ENST00000391952 MROH2BQ7Z745 1585 aa26.33■■□□□ 1.81
CLASRP-202ENST00000391952 WIZO95785 1651 aa26.17■■□□□ 1.78
CLASRP-202ENST00000391952 BAZ1AQ9NRL2 1556 aaPredicted RBP26.14■■□□□ 1.77
CLASRP-202ENST00000391952 SMARCA4P51532 1647 aa25.97■■□□□ 1.75
CLASRP-202ENST00000391952 LOC105371045A0A1W2PR82 267 aa25.86■■□□□ 1.73
CLASRP-202ENST00000391952 TOP2AP11388 1531 aaKnown RBP25.83■■□□□ 1.73
CLASRP-202ENST00000391952 TRIM41Q8WV44 630 aa25.83■■□□□ 1.72
CLASRP-202ENST00000391952 EIF4G1Q04637 1599 aaKnown RBP25.82■■□□□ 1.72
CLASRP-202ENST00000391952 DNAJC5BQ9UF47 199 aa25.72■■□□□ 1.71
CLASRP-202ENST00000391952 SMARCA2P51531 1590 aa25.66■■□□□ 1.7
CLASRP-202ENST00000391952 CCDC88BA6NC98 1476 aa25.64■■□□□ 1.69
CLASRP-202ENST00000391952 CC2D2AQ9P2K1 1620 aa25.64■■□□□ 1.69
CLASRP-202ENST00000391952 PEG3Q9GZU2 1588 aa25.59■■□□□ 1.69
CLASRP-202ENST00000391952 FAM9AQ8IZU1 332 aaPredicted RBP25.45■■□□□ 1.67
CLASRP-202ENST00000391952 ATAD2BQ9ULI0 1458 aa25.42■■□□□ 1.66
CLASRP-202ENST00000391952 PCGF6Q9BYE7 350 aa25.39■■□□□ 1.65
CLASRP-202ENST00000391952 ABCC8Q09428 1581 aa25.37■■□□□ 1.65
CLASRP-202ENST00000391952 NCAPD3P42695 1498 aa25.31■■□□□ 1.64
CLASRP-202ENST00000391952 BAZ1BQ9UIG0 1483 aaKnown RBP25.24■■□□□ 1.63
CLASRP-202ENST00000391952 HRCP23327 699 aa25.22■■□□□ 1.63
CLASRP-202ENST00000391952 HMGXB3Q12766 1538 aa25.21■■□□□ 1.63
CLASRP-202ENST00000391952 TRIM26Q12899 539 aaPredicted RBP25.14■■□□□ 1.61
CLASRP-202ENST00000391952 EHMT2Q96KQ7 1210 aa25.13■■□□□ 1.61
CLASRP-202ENST00000391952 WRNQ14191 1432 aaPredicted RBP eCLIP25.05■■□□□ 1.6
CLASRP-202ENST00000391952 SOGA1O94964 1423 aa25.04■■□□□ 1.6
CLASRP-202ENST00000391952 EEA1Q15075 1411 aa24.99■■□□□ 1.59
CLASRP-202ENST00000391952 SYNJ1O43426 1573 aa24.97■■□□□ 1.59
CLASRP-202ENST00000391952 RUSC2Q8N2Y8 1516 aa24.94■■□□□ 1.58
CLASRP-202ENST00000391952 CSRNP3Q8WYN3 585 aa24.87■■□□□ 1.57
CLASRP-202ENST00000391952 TNIKQ9UKE5 1360 aa24.81■■□□□ 1.56
CLASRP-202ENST00000391952 CEP162Q5TB80 1403 aa24.76■■□□□ 1.55
CLASRP-202ENST00000391952 TOP2BQ02880 1626 aa24.76■■□□□ 1.55
CLASRP-202ENST00000391952 GOLGA3Q08378 1498 aa24.73■■□□□ 1.55
CLASRP-202ENST00000391952 BIVM-ERCC5R4GMW8 1640 aa24.72■■□□□ 1.55
CLASRP-202ENST00000391952 KIF21BO75037 1637 aa24.69■■□□□ 1.54
CLASRP-202ENST00000391952 NESP48681 1621 aa24.68■■□□□ 1.54
CLASRP-202ENST00000391952 CFTRP13569 1480 aa24.66■■□□□ 1.54
CLASRP-202ENST00000391952 CEP164Q9UPV0 1460 aa24.65■■□□□ 1.54
CLASRP-202ENST00000391952 PPARGC1BQ86YN6 1023 aaKnown RBP24.63■■□□□ 1.53
CLASRP-202ENST00000391952 CADPSQ9ULU8 1353 aa24.62■■□□□ 1.53
CLASRP-202ENST00000391952 UBTFP17480 764 aaKnown RBP24.62■■□□□ 1.53
CLASRP-202ENST00000391952 LAMC3Q9Y6N6 1575 aa24.57■■□□□ 1.52
CLASRP-202ENST00000391952 CUX1P39880 1505 aa24.56■■□□□ 1.52
CLASRP-202ENST00000391952 PRDM2Q13029 1718 aa24.55■■□□□ 1.52
CLASRP-202ENST00000391952 RAPGEF2Q9Y4G8 1499 aa24.48■■□□□ 1.51
CLASRP-202ENST00000391952 ZEB1P37275 1124 aaPredicted RBP24.43■■□□□ 1.5
CLASRP-202ENST00000391952 PDS5BQ9NTI5 1447 aa24.4■■□□□ 1.5
CLASRP-202ENST00000391952 ERCC6Q03468 1493 aa24.39■■□□□ 1.49
CLASRP-202ENST00000391952 PRXQ9BXM0 1461 aa24.39■■□□□ 1.49
CLASRP-202ENST00000391952 CLIP1P30622 1438 aa24.38■■□□□ 1.49
CLASRP-202ENST00000391952 ERICH3Q5RHP9 1530 aa24.37■■□□□ 1.49
CLASRP-202ENST00000391952 KIF21AQ7Z4S6 1674 aa24.36■■□□□ 1.49
CLASRP-202ENST00000391952 FANCD2Q9BXW9 1451 aa24.36■■□□□ 1.49
CLASRP-202ENST00000391952 KIF27Q86VH2 1401 aa24.31■■□□□ 1.48
CLASRP-202ENST00000391952 VPS8Q8N3P4 1428 aa24.27■■□□□ 1.48
CLASRP-202ENST00000391952 TTBK1Q5TCY1 1321 aaPredicted RBP24.23■■□□□ 1.47
CLASRP-202ENST00000391952 FGD5Q6ZNL6 1462 aa24.16■■□□□ 1.46
CLASRP-202ENST00000391952 THOC2Q8NI27 1593 aaKnown RBP24.15■■□□□ 1.46
CLASRP-202ENST00000391952 MRC2Q9UBG0 1479 aa24.14■■□□□ 1.46
CLASRP-202ENST00000391952 CUX2O14529 1486 aa24.13■■□□□ 1.45
CLASRP-202ENST00000391952 URB2Q14146 1524 aaKnown RBP24.11■■□□□ 1.45
CLASRP-202ENST00000391952 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.11■■□□□ 1.45
CLASRP-202ENST00000391952 ARAP1Q96P48 1450 aa24.09■■□□□ 1.45
CLASRP-202ENST00000391952 IGF1RP08069 1367 aa24.09■■□□□ 1.45
CLASRP-202ENST00000391952 RANGAP1P46060 587 aaPredicted RBP24.08■■□□□ 1.45
CLASRP-202ENST00000391952 DNMBPQ6XZF7 1577 aa24.06■■□□□ 1.44
CLASRP-202ENST00000391952 WDR62O43379 1518 aa24.04■■□□□ 1.44
CLASRP-202ENST00000391952 CCER1Q8TC90 406 aaPredicted RBP24.03■■□□□ 1.44
CLASRP-202ENST00000391952 TOPBP1Q92547 1522 aa24.01■■□□□ 1.43
CLASRP-202ENST00000391952 APLP2Q06481 763 aa23.98■■□□□ 1.43
CLASRP-202ENST00000391952 ARHGAP35Q9NRY4 1499 aa23.95■■□□□ 1.43
CLASRP-202ENST00000391952 CARMIL1Q5VZK9 1371 aa23.95■■□□□ 1.43
CLASRP-202ENST00000391952 POLA1P09884 1462 aaPredicted RBP23.94■■□□□ 1.42
CLASRP-202ENST00000391952 ABCA10Q8WWZ4 1543 aa23.94■■□□□ 1.42
CLASRP-202ENST00000391952 RAD54L2Q9Y4B4 1467 aa23.91■■□□□ 1.42
CLASRP-202ENST00000391952 WDR97A6NE52 1622 aa23.81■■□□□ 1.4
CLASRP-202ENST00000391952 KANK4Q5T7N3 995 aaPredicted RBP23.79■■□□□ 1.4
CLASRP-202ENST00000391952 HNRNPUL2Q1KMD3 747 aaKnown RBP23.79■■□□□ 1.4
CLASRP-202ENST00000391952 CUL7Q14999 1698 aa23.77■■□□□ 1.4
CLASRP-202ENST00000391952 IFT140Q96RY7 1462 aa23.73■■□□□ 1.39
CLASRP-202ENST00000391952 TARBP1Q13395 1621 aaKnown RBP23.71■■□□□ 1.39
CLASRP-202ENST00000391952 ABCA5Q8WWZ7 1642 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms