RNA–Protein interactions for RNA: ENST00000583590.5

DDX42-216, Transcript of DEAD-box helicase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene DDX42, Length 4,148 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-216ENST00000583590 NISCHQ9Y2I1 1504 aa35.55■■■■□ 3.28
DDX42-216ENST00000583590 DCAF8L2P0C7V8 631 aa32.81■■■□□ 2.84
DDX42-216ENST00000583590 SHROOM4Q9ULL8 1493 aa32.5■■■□□ 2.79
DDX42-216ENST00000583590 SUPT5HO00267 1087 aaKnown RBP32.24■■■□□ 2.75
DDX42-216ENST00000583590 EHMT2Q96KQ7 1210 aa30.56■■■□□ 2.48
DDX42-216ENST00000583590 PCGF6Q9BYE7 350 aa30.18■■■□□ 2.42
DDX42-216ENST00000583590 FAM9AQ8IZU1 332 aaPredicted RBP30.15■■■□□ 2.42
DDX42-216ENST00000583590 CHIC1Q5VXU3 224 aa30.09■■■□□ 2.41
DDX42-216ENST00000583590 LOC105371045A0A1W2PR82 267 aa29.86■■■□□ 2.37
DDX42-216ENST00000583590 ZCCHC6Q5VYS8 1495 aaKnown RBP29.77■■■□□ 2.36
DDX42-216ENST00000583590 TRIM41Q8WV44 630 aa29.66■■■□□ 2.34
DDX42-216ENST00000583590 TTBK1Q5TCY1 1321 aaPredicted RBP29.44■■■□□ 2.3
DDX42-216ENST00000583590 PPARGC1BQ86YN6 1023 aaKnown RBP29.34■■■□□ 2.29
DDX42-216ENST00000583590 ABCC9O60706 1549 aa29.33■■■□□ 2.29
DDX42-216ENST00000583590 CCDC180Q9P1Z9 1646 aa29.33■■■□□ 2.29
DDX42-216ENST00000583590 HRCP23327 699 aa29.24■■■□□ 2.27
DDX42-216ENST00000583590 MYO15BQ96JP2 1530 aa29.16■■■□□ 2.26
DDX42-216ENST00000583590 TRIM26Q12899 539 aaPredicted RBP28.93■■■□□ 2.22
DDX42-216ENST00000583590 RANGAP1P46060 587 aaPredicted RBP28.93■■■□□ 2.22
DDX42-216ENST00000583590 SCRIBQ14160 1630 aa28.9■■■□□ 2.22
DDX42-216ENST00000583590 PABPN1Q86U42 306 aaKnown RBP eCLIP28.74■■■□□ 2.191e-6■■□□□ 14.2
DDX42-216ENST00000583590 UBTFP17480 764 aaKnown RBP28.71■■■□□ 2.19
DDX42-216ENST00000583590 CCER1Q8TC90 406 aaPredicted RBP28.6■■■□□ 2.17
DDX42-216ENST00000583590 RSF1Q96T23 1441 aaPredicted RBP28.47■■■□□ 2.15
DDX42-216ENST00000583590 ZEB1P37275 1124 aaPredicted RBP28.41■■■□□ 2.14
DDX42-216ENST00000583590 APLP2Q06481 763 aa28.41■■■□□ 2.14
DDX42-216ENST00000583590 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.36■■■□□ 2.13
DDX42-216ENST00000583590 DCAF1Q9Y4B6 1507 aa28.31■■■□□ 2.12
DDX42-216ENST00000583590 CECR2Q9BXF3 1484 aa28.2■■■□□ 2.11
DDX42-216ENST00000583590 HNRNPUL2Q1KMD3 747 aaKnown RBP28.06■■■□□ 2.08
DDX42-216ENST00000583590 RB1CC1Q8TDY2 1594 aa27.98■■■□□ 2.07
DDX42-216ENST00000583590 ATP1B4Q9UN42 357 aaPredicted RBP27.92■■■□□ 2.06
DDX42-216ENST00000583590 YTHDC1Q96MU7 727 aaKnown RBP27.85■■■□□ 2.05
DDX42-216ENST00000583590 MROH2BQ7Z745 1585 aa27.84■■■□□ 2.05
DDX42-216ENST00000583590 CSRNP3Q8WYN3 585 aa27.82■■■□□ 2.04
DDX42-216ENST00000583590 NACADO15069 1562 aa27.8■■■□□ 2.04
DDX42-216ENST00000583590 ITGAEP38570 1179 aa27.77■■■□□ 2.04
DDX42-216ENST00000583590 WIZO95785 1651 aa27.57■■■□□ 2
DDX42-216ENST00000583590 DIEXFQ68CQ4 756 aaKnown RBP27.56■■■□□ 2
DDX42-216ENST00000583590 CENPBP07199 599 aaPredicted RBP27.55■■■□□ 2
DDX42-216ENST00000583590 ABCC8Q09428 1581 aa27.43■■□□□ 1.98
DDX42-216ENST00000583590 BAZ1AQ9NRL2 1556 aaPredicted RBP27.42■■□□□ 1.98
DDX42-216ENST00000583590 SOGA1O94964 1423 aa27.4■■□□□ 1.98
DDX42-216ENST00000583590 CCDC88BA6NC98 1476 aa27.34■■□□□ 1.97
DDX42-216ENST00000583590 CEP162Q5TB80 1403 aa27.32■■□□□ 1.96
DDX42-216ENST00000583590 P3H3Q8IVL6 736 aa27.23■■□□□ 1.95
DDX42-216ENST00000583590 WRNQ14191 1432 aaPredicted RBP eCLIP27.2■■□□□ 1.94
DDX42-216ENST00000583590 ZNF316A6NFI3 1004 aaPredicted RBP27.1■■□□□ 1.93
DDX42-216ENST00000583590 FAM50AQ14320 339 aaKnown RBP27.09■■□□□ 1.93
DDX42-216ENST00000583590 RUSC2Q8N2Y8 1516 aa27.08■■□□□ 1.93
DDX42-216ENST00000583590 GTF3C3Q9Y5Q9 886 aa27.07■■□□□ 1.92
DDX42-216ENST00000583590 CLIP1P30622 1438 aa27.06■■□□□ 1.92
DDX42-216ENST00000583590 TNIKQ9UKE5 1360 aa27.05■■□□□ 1.92
DDX42-216ENST00000583590 BAZ1BQ9UIG0 1483 aaKnown RBP27.02■■□□□ 1.92
DDX42-216ENST00000583590 SCAF1Q9H7N4 1312 aaKnown RBP26.99■■□□□ 1.91
DDX42-216ENST00000583590 GOLGA3Q08378 1498 aa26.99■■□□□ 1.91
DDX42-216ENST00000583590 NEUROD1Q13562 356 aa26.97■■□□□ 1.91
DDX42-216ENST00000583590 TOP2AP11388 1531 aaKnown RBP26.96■■□□□ 1.91
DDX42-216ENST00000583590 ACIN1Q9UKV3 1341 aaKnown RBP26.94■■□□□ 1.9
DDX42-216ENST00000583590 SMARCA4P51532 1647 aa26.91■■□□□ 1.9
DDX42-216ENST00000583590 EEA1Q15075 1411 aa26.88■■□□□ 1.89
DDX42-216ENST00000583590 ARID3CA6NKF2 412 aa26.81■■□□□ 1.88
DDX42-216ENST00000583590 CEP164Q9UPV0 1460 aa26.77■■□□□ 1.88
DDX42-216ENST00000583590 SMARCA2P51531 1590 aa26.76■■□□□ 1.87
DDX42-216ENST00000583590 MIER1Q8N108 512 aa26.75■■□□□ 1.87
DDX42-216ENST00000583590 PELP1Q8IZL8 1130 aaKnown RBP26.67■■□□□ 1.86
DDX42-216ENST00000583590 CNGB1Q14028 1251 aaPredicted RBP26.66■■□□□ 1.86
DDX42-216ENST00000583590 ATAD2BQ9ULI0 1458 aa26.64■■□□□ 1.86
DDX42-216ENST00000583590 KANK4Q5T7N3 995 aaPredicted RBP26.64■■□□□ 1.85
DDX42-216ENST00000583590 RAPGEF2Q9Y4G8 1499 aa26.59■■□□□ 1.85
DDX42-216ENST00000583590 HIRIP3Q9BW71 556 aaPredicted RBP26.53■■□□□ 1.84
DDX42-216ENST00000583590 KIF27Q86VH2 1401 aa26.5■■□□□ 1.83
DDX42-216ENST00000583590 VPS8Q8N3P4 1428 aa26.49■■□□□ 1.83
DDX42-216ENST00000583590 TRIM52Q96A61 297 aa26.49■■□□□ 1.83
DDX42-216ENST00000583590 POLR3GLQ9BT43 218 aa26.47■■□□□ 1.83
DDX42-216ENST00000583590 BCANQ96GW7 911 aa26.43■■□□□ 1.82
DDX42-216ENST00000583590 FBLN2P98095 1184 aa26.39■■□□□ 1.82
DDX42-216ENST00000583590 DDX10Q13206 875 aaKnown RBP26.38■■□□□ 1.81
DDX42-216ENST00000583590 CUX2O14529 1486 aa26.36■■□□□ 1.81
DDX42-216ENST00000583590 CHIC2Q9UKJ5 165 aa26.35■■□□□ 1.81
DDX42-216ENST00000583590 NEFLP07196 543 aa26.34■■□□□ 1.81
DDX42-216ENST00000583590 SYNJ1O43426 1573 aa26.31■■□□□ 1.8
DDX42-216ENST00000583590 SIN3AQ96ST3 1273 aa26.3■■□□□ 1.8
DDX42-216ENST00000583590 CARMIL1Q5VZK9 1371 aa26.25■■□□□ 1.79
DDX42-216ENST00000583590 BICRAQ9NZM4 1560 aa26.24■■□□□ 1.79
DDX42-216ENST00000583590 CCNB3Q8WWL7 1395 aa26.19■■□□□ 1.78
DDX42-216ENST00000583590 ZNF326Q5BKZ1 582 aaKnown RBP26.17■■□□□ 1.78
DDX42-216ENST00000583590 MTUS2Q5JR59 1369 aa26.15■■□□□ 1.78
DDX42-216ENST00000583590 UNC13AQ9UPW8 1703 aa26.14■■□□□ 1.78
DDX42-216ENST00000583590 ANP32CO43423 234 aa26.13■■□□□ 1.77
DDX42-216ENST00000583590 RRP7BPQ9NSQ0 103 aa26.13■■□□□ 1.77
DDX42-216ENST00000583590 ZNF777Q9ULD5 760 aaPredicted RBP26.12■■□□□ 1.77
DDX42-216ENST00000583590 TONSLQ96HA7 1378 aa26.06■■□□□ 1.76
DDX42-216ENST00000583590 CADPSQ9ULU8 1353 aa26.04■■□□□ 1.76
DDX42-216ENST00000583590 TDRD9Q8NDG6 1382 aaKnown RBP26.03■■□□□ 1.76
DDX42-216ENST00000583590 KIF21BO75037 1637 aa26.02■■□□□ 1.76
DDX42-216ENST00000583590 EIF4G1Q04637 1599 aaKnown RBP25.98■■□□□ 1.75
DDX42-216ENST00000583590 RAB3GAP2Q9H2M9 1393 aa25.97■■□□□ 1.75
DDX42-216ENST00000583590 DHX57Q6P158 1386 aaKnown RBP25.97■■□□□ 1.75
DDX42-216ENST00000583590 IGF1RP08069 1367 aa25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms