RNA–Protein interactions for RNA: ENST00000578681.5

DDX42-208, Transcript of DEAD-box helicase 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX42, Length 4,337 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-208ENST00000578681 NISCHQ9Y2I1 1504 aa33.12■■■□□ 2.89
DDX42-208ENST00000578681 DCAF8L2P0C7V8 631 aa30■■■□□ 2.39
DDX42-208ENST00000578681 SHROOM4Q9ULL8 1493 aa29.6■■■□□ 2.33
DDX42-208ENST00000578681 SUPT5HO00267 1087 aaKnown RBP29.16■■■□□ 2.26
DDX42-208ENST00000578681 ZCCHC6Q5VYS8 1495 aaKnown RBP27.72■■■□□ 2.03
DDX42-208ENST00000578681 CCDC180Q9P1Z9 1646 aa27.65■■■□□ 2.02
DDX42-208ENST00000578681 EHMT2Q96KQ7 1210 aa27.47■■□□□ 1.99
DDX42-208ENST00000578681 ABCC9O60706 1549 aa27.45■■□□□ 1.98
DDX42-208ENST00000578681 CHIC1Q5VXU3 224 aa27.28■■□□□ 1.96
DDX42-208ENST00000578681 FAM9AQ8IZU1 332 aaPredicted RBP27.22■■□□□ 1.95
DDX42-208ENST00000578681 LOC105371045A0A1W2PR82 267 aa26.94■■□□□ 1.9
DDX42-208ENST00000578681 TRIM41Q8WV44 630 aa26.93■■□□□ 1.9
DDX42-208ENST00000578681 SCRIBQ14160 1630 aa26.88■■□□□ 1.89
DDX42-208ENST00000578681 PCGF6Q9BYE7 350 aa26.86■■□□□ 1.89
DDX42-208ENST00000578681 PABPN1Q86U42 306 aaKnown RBP eCLIP26.7■■□□□ 1.861e-6■■□□□ 14.2
DDX42-208ENST00000578681 DCAF1Q9Y4B6 1507 aa26.56■■□□□ 1.84
DDX42-208ENST00000578681 MYO15BQ96JP2 1530 aa26.46■■□□□ 1.83
DDX42-208ENST00000578681 TTBK1Q5TCY1 1321 aaPredicted RBP26.41■■□□□ 1.82
DDX42-208ENST00000578681 PPARGC1BQ86YN6 1023 aaKnown RBP26.35■■□□□ 1.81
DDX42-208ENST00000578681 RSF1Q96T23 1441 aaPredicted RBP26.33■■□□□ 1.81
DDX42-208ENST00000578681 PELP1Q8IZL8 1130 aaKnown RBP26.28■■□□□ 1.8
DDX42-208ENST00000578681 CECR2Q9BXF3 1484 aa26.18■■□□□ 1.78
DDX42-208ENST00000578681 RANGAP1P46060 587 aaPredicted RBP26.17■■□□□ 1.78
DDX42-208ENST00000578681 NACADO15069 1562 aa26.15■■□□□ 1.78
DDX42-208ENST00000578681 UBTFP17480 764 aaKnown RBP26.04■■□□□ 1.76
DDX42-208ENST00000578681 RB1CC1Q8TDY2 1594 aa26.01■■□□□ 1.76
DDX42-208ENST00000578681 HRCP23327 699 aa25.95■■□□□ 1.75
DDX42-208ENST00000578681 TRIM26Q12899 539 aaPredicted RBP25.95■■□□□ 1.74
DDX42-208ENST00000578681 MROH2BQ7Z745 1585 aa25.87■■□□□ 1.73
DDX42-208ENST00000578681 MYT1Q01538 1121 aa25.76■■□□□ 1.71
DDX42-208ENST00000578681 APLP2Q06481 763 aa25.65■■□□□ 1.7
DDX42-208ENST00000578681 WIZO95785 1651 aa25.62■■□□□ 1.69
DDX42-208ENST00000578681 CCER1Q8TC90 406 aaPredicted RBP25.55■■□□□ 1.68
DDX42-208ENST00000578681 BAZ1AQ9NRL2 1556 aaPredicted RBP25.55■■□□□ 1.68
DDX42-208ENST00000578681 CSRNP3Q8WYN3 585 aa25.44■■□□□ 1.66
DDX42-208ENST00000578681 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.39■■□□□ 1.66
DDX42-208ENST00000578681 CCDC88BA6NC98 1476 aa25.33■■□□□ 1.65
DDX42-208ENST00000578681 ZEB1P37275 1124 aaPredicted RBP25.33■■□□□ 1.65
DDX42-208ENST00000578681 ATP1B4Q9UN42 357 aaPredicted RBP25.31■■□□□ 1.64
DDX42-208ENST00000578681 ABCC8Q09428 1581 aa25.28■■□□□ 1.64
DDX42-208ENST00000578681 HNRNPUL2Q1KMD3 747 aaKnown RBP25.25■■□□□ 1.63
DDX42-208ENST00000578681 SMARCA4P51532 1647 aa25.16■■□□□ 1.62
DDX42-208ENST00000578681 SOGA1O94964 1423 aa25.16■■□□□ 1.62
DDX42-208ENST00000578681 BAZ1BQ9UIG0 1483 aaKnown RBP25.16■■□□□ 1.62
DDX42-208ENST00000578681 TOP2AP11388 1531 aaKnown RBP25.1■■□□□ 1.61
DDX42-208ENST00000578681 WRNQ14191 1432 aaPredicted RBP eCLIP25.08■■□□□ 1.61
DDX42-208ENST00000578681 ITGAEP38570 1179 aa25.05■■□□□ 1.6
DDX42-208ENST00000578681 CEP162Q5TB80 1403 aa24.93■■□□□ 1.58
DDX42-208ENST00000578681 ATAD2BQ9ULI0 1458 aa24.91■■□□□ 1.58
DDX42-208ENST00000578681 RUSC2Q8N2Y8 1516 aa24.91■■□□□ 1.58
DDX42-208ENST00000578681 SMARCA2P51531 1590 aa24.9■■□□□ 1.58
DDX42-208ENST00000578681 P3H3Q8IVL6 736 aa24.85■■□□□ 1.57
DDX42-208ENST00000578681 BICRAQ9NZM4 1560 aa24.8■■□□□ 1.56
DDX42-208ENST00000578681 UNC13AQ9UPW8 1703 aa24.76■■□□□ 1.55
DDX42-208ENST00000578681 TNIKQ9UKE5 1360 aa24.76■■□□□ 1.55
DDX42-208ENST00000578681 GOLGA3Q08378 1498 aa24.74■■□□□ 1.55
DDX42-208ENST00000578681 EEA1Q15075 1411 aa24.73■■□□□ 1.55
DDX42-208ENST00000578681 CLIP1P30622 1438 aa24.72■■□□□ 1.55
DDX42-208ENST00000578681 YTHDC1Q96MU7 727 aaKnown RBP24.6■■□□□ 1.53
DDX42-208ENST00000578681 CEP164Q9UPV0 1460 aa24.59■■□□□ 1.53
DDX42-208ENST00000578681 FAM50AQ14320 339 aaKnown RBP24.54■■□□□ 1.52
DDX42-208ENST00000578681 DIEXFQ68CQ4 756 aaKnown RBP24.51■■□□□ 1.51
DDX42-208ENST00000578681 ARID3CA6NKF2 412 aa24.46■■□□□ 1.51
DDX42-208ENST00000578681 KIF27Q86VH2 1401 aa24.45■■□□□ 1.51
DDX42-208ENST00000578681 RAPGEF2Q9Y4G8 1499 aa24.45■■□□□ 1.5
DDX42-208ENST00000578681 EIF4G1Q04637 1599 aaKnown RBP24.43■■□□□ 1.5
DDX42-208ENST00000578681 SYNJ1O43426 1573 aa24.4■■□□□ 1.5
DDX42-208ENST00000578681 CUX2O14529 1486 aa24.36■■□□□ 1.49
DDX42-208ENST00000578681 NCAPD3P42695 1498 aa24.33■■□□□ 1.48
DDX42-208ENST00000578681 FBLN2P98095 1184 aa24.3■■□□□ 1.48
DDX42-208ENST00000578681 KANK4Q5T7N3 995 aaPredicted RBP24.3■■□□□ 1.48
DDX42-208ENST00000578681 CADPSQ9ULU8 1353 aa24.3■■□□□ 1.48
DDX42-208ENST00000578681 CENPBP07199 599 aaPredicted RBP24.29■■□□□ 1.48
DDX42-208ENST00000578681 NEUROD1Q13562 356 aa24.27■■□□□ 1.48
DDX42-208ENST00000578681 VPS8Q8N3P4 1428 aa24.24■■□□□ 1.47
DDX42-208ENST00000578681 ZNF316A6NFI3 1004 aaPredicted RBP24.23■■□□□ 1.47
DDX42-208ENST00000578681 CARMIL1Q5VZK9 1371 aa24.21■■□□□ 1.47
DDX42-208ENST00000578681 PEG3Q9GZU2 1588 aa24.16■■□□□ 1.46
DDX42-208ENST00000578681 DNAJC5BQ9UF47 199 aa24.14■■□□□ 1.45
DDX42-208ENST00000578681 TDRD9Q8NDG6 1382 aaKnown RBP24.1■■□□□ 1.45
DDX42-208ENST00000578681 SCAF1Q9H7N4 1312 aaKnown RBP24.1■■□□□ 1.45
DDX42-208ENST00000578681 CFTRP13569 1480 aa24.07■■□□□ 1.44
DDX42-208ENST00000578681 FANCD2Q9BXW9 1451 aa24.04■■□□□ 1.44
DDX42-208ENST00000578681 CUX1P39880 1505 aa24.03■■□□□ 1.44
DDX42-208ENST00000578681 NESP48681 1621 aa24.01■■□□□ 1.43
DDX42-208ENST00000578681 HMGXB3Q12766 1538 aa24■■□□□ 1.43
DDX42-208ENST00000578681 IGF1RP08069 1367 aa24■■□□□ 1.43
DDX42-208ENST00000578681 FGD5Q6ZNL6 1462 aa23.99■■□□□ 1.43
DDX42-208ENST00000578681 RAD54L2Q9Y4B4 1467 aa23.98■■□□□ 1.43
DDX42-208ENST00000578681 CC2D2AQ9P2K1 1620 aa23.98■■□□□ 1.43
DDX42-208ENST00000578681 TOP2BQ02880 1626 aa23.98■■□□□ 1.43
DDX42-208ENST00000578681 TRIM52Q96A61 297 aa23.98■■□□□ 1.43
DDX42-208ENST00000578681 CHIC2Q9UKJ5 165 aa23.94■■□□□ 1.42
DDX42-208ENST00000578681 KIF21BO75037 1637 aa23.92■■□□□ 1.42
DDX42-208ENST00000578681 MTUS2Q5JR59 1369 aa23.91■■□□□ 1.42
DDX42-208ENST00000578681 CCNB3Q8WWL7 1395 aa23.87■■□□□ 1.41
DDX42-208ENST00000578681 MIER1Q8N108 512 aa23.86■■□□□ 1.41
DDX42-208ENST00000578681 PRXQ9BXM0 1461 aa23.85■■□□□ 1.41
DDX42-208ENST00000578681 FHOD3Q2V2M9 1422 aa23.84■■□□□ 1.41
DDX42-208ENST00000578681 ARAP1Q96P48 1450 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms