RNA–Protein interactions for RNA: ENST00000370691.6

LAMA5-203, Transcript of laminin subunit alpha 5, humanhuman

TSL 1 (best)

Gene LAMA5, Length 3,160 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA5-203ENST00000370691 NISCHQ9Y2I1 1504 aa29.14■■■□□ 2.25
LAMA5-203ENST00000370691 CCDC180Q9P1Z9 1646 aa24.99■■□□□ 1.59
LAMA5-203ENST00000370691 DCAF8L2P0C7V8 631 aa24.87■■□□□ 1.57
LAMA5-203ENST00000370691 SHROOM4Q9ULL8 1493 aa24.59■■□□□ 1.53
LAMA5-203ENST00000370691 ZCCHC6Q5VYS8 1495 aaKnown RBP24.44■■□□□ 1.5
LAMA5-203ENST00000370691 ABCC9O60706 1549 aa24.27■■□□□ 1.48
LAMA5-203ENST00000370691 DCAF1Q9Y4B6 1507 aa23.74■■□□□ 1.39
LAMA5-203ENST00000370691 SUPT5HO00267 1087 aaKnown RBP23.71■■□□□ 1.39
LAMA5-203ENST00000370691 SCRIBQ14160 1630 aa23.56■■□□□ 1.36
LAMA5-203ENST00000370691 NACADO15069 1562 aa23.4■■□□□ 1.34
LAMA5-203ENST00000370691 PELP1Q8IZL8 1130 aaKnown RBP23.39■■□□□ 1.34
LAMA5-203ENST00000370691 MYO15BQ96JP2 1530 aa23.35■■□□□ 1.33
LAMA5-203ENST00000370691 RB1CC1Q8TDY2 1594 aa23.26■■□□□ 1.31
LAMA5-203ENST00000370691 PABPN1Q86U42 306 aaKnown RBP eCLIP23.15■■□□□ 1.32e-7■■□□□ 14.3
LAMA5-203ENST00000370691 CECR2Q9BXF3 1484 aa22.91■■□□□ 1.26
LAMA5-203ENST00000370691 HRCP23327 699 aa22.81■■□□□ 1.24
LAMA5-203ENST00000370691 RSF1Q96T23 1441 aaPredicted RBP22.8■■□□□ 1.24
LAMA5-203ENST00000370691 UNC13AQ9UPW8 1703 aa22.79■■□□□ 1.24
LAMA5-203ENST00000370691 MYT1Q01538 1121 aa22.76■■□□□ 1.23
LAMA5-203ENST00000370691 MROH2BQ7Z745 1585 aa22.68■■□□□ 1.22
LAMA5-203ENST00000370691 BICRAQ9NZM4 1560 aa22.64■■□□□ 1.21
LAMA5-203ENST00000370691 WIZO95785 1651 aa22.49■■□□□ 1.19
LAMA5-203ENST00000370691 CHIC1Q5VXU3 224 aa22.45■■□□□ 1.18
LAMA5-203ENST00000370691 BAZ1AQ9NRL2 1556 aaPredicted RBP22.43■■□□□ 1.18
LAMA5-203ENST00000370691 PPARGC1BQ86YN6 1023 aaKnown RBP22.39■■□□□ 1.17
LAMA5-203ENST00000370691 SMARCA4P51532 1647 aa22.34■■□□□ 1.17
LAMA5-203ENST00000370691 SCAF1Q9H7N4 1312 aaKnown RBP22.08■■□□□ 1.13
LAMA5-203ENST00000370691 TRIM41Q8WV44 630 aa22.05■■□□□ 1.12
LAMA5-203ENST00000370691 PCGF6Q9BYE7 350 aa22.05■■□□□ 1.12
LAMA5-203ENST00000370691 ATAD2BQ9ULI0 1458 aa22.05■■□□□ 1.12
LAMA5-203ENST00000370691 TOP2AP11388 1531 aaKnown RBP22.05■■□□□ 1.12
LAMA5-203ENST00000370691 CCDC88BA6NC98 1476 aa22.04■■□□□ 1.12
LAMA5-203ENST00000370691 FAM9AQ8IZU1 332 aaPredicted RBP22.01■■□□□ 1.11
LAMA5-203ENST00000370691 EIF4G1Q04637 1599 aaKnown RBP22■■□□□ 1.11
LAMA5-203ENST00000370691 EHMT2Q96KQ7 1210 aa21.99■■□□□ 1.11
LAMA5-203ENST00000370691 BAZ1BQ9UIG0 1483 aaKnown RBP21.98■■□□□ 1.11
LAMA5-203ENST00000370691 SMARCA2P51531 1590 aa21.92■■□□□ 1.1
LAMA5-203ENST00000370691 LOC105371045A0A1W2PR82 267 aa21.9■■□□□ 1.1
LAMA5-203ENST00000370691 PEG3Q9GZU2 1588 aa21.85■■□□□ 1.09
LAMA5-203ENST00000370691 ABCC8Q09428 1581 aa21.77■■□□□ 1.08
LAMA5-203ENST00000370691 NCAPD3P42695 1498 aa21.72■■□□□ 1.07
LAMA5-203ENST00000370691 CC2D2AQ9P2K1 1620 aa21.7■■□□□ 1.06
LAMA5-203ENST00000370691 DNAJC5BQ9UF47 199 aa21.68■■□□□ 1.06
LAMA5-203ENST00000370691 HMGXB3Q12766 1538 aa21.57■■□□□ 1.04
LAMA5-203ENST00000370691 TTBK1Q5TCY1 1321 aaPredicted RBP21.55■■□□□ 1.04
LAMA5-203ENST00000370691 WRNQ14191 1432 aaPredicted RBP eCLIP21.47■■□□□ 1.03
LAMA5-203ENST00000370691 SOGA1O94964 1423 aa21.42■■□□□ 1.02
LAMA5-203ENST00000370691 RUSC2Q8N2Y8 1516 aa21.36■■□□□ 1.01
LAMA5-203ENST00000370691 TRIM26Q12899 539 aaPredicted RBP21.34■■□□□ 1.01
LAMA5-203ENST00000370691 SYNJ1O43426 1573 aa21.34■■□□□ 1.01
LAMA5-203ENST00000370691 NESP48681 1621 aa21.33■■□□□ 1
LAMA5-203ENST00000370691 CADPSQ9ULU8 1353 aa21.33■■□□□ 1
LAMA5-203ENST00000370691 CFTRP13569 1480 aa21.32■■□□□ 1
LAMA5-203ENST00000370691 ACIN1Q9UKV3 1341 aaKnown RBP21.3■■□□□ 1
LAMA5-203ENST00000370691 GTF3C3Q9Y5Q9 886 aa21.24■□□□□ 0.99
LAMA5-203ENST00000370691 CSRNP3Q8WYN3 585 aa21.21■□□□□ 0.99
LAMA5-203ENST00000370691 RANGAP1P46060 587 aaPredicted RBP21.2■□□□□ 0.98
LAMA5-203ENST00000370691 NEUROD1Q13562 356 aa21.2■□□□□ 0.98
LAMA5-203ENST00000370691 BCL11AQ9H165 835 aa21.2■□□□□ 0.98
LAMA5-203ENST00000370691 UBTFP17480 764 aaKnown RBP21.19■□□□□ 0.98
LAMA5-203ENST00000370691 CUX1P39880 1505 aa21.15■□□□□ 0.98
LAMA5-203ENST00000370691 ZEB1P37275 1124 aaPredicted RBP21.14■□□□□ 0.97
LAMA5-203ENST00000370691 FANCD2Q9BXW9 1451 aa21.12■□□□□ 0.97
LAMA5-203ENST00000370691 CENPBP07199 599 aaPredicted RBP21.09■□□□□ 0.97
LAMA5-203ENST00000370691 TOP2BQ02880 1626 aa21.07■□□□□ 0.96
LAMA5-203ENST00000370691 PRKCSHP14314 528 aaPredicted RBP21.01■□□□□ 0.95
LAMA5-203ENST00000370691 FGD5Q6ZNL6 1462 aa20.95■□□□□ 0.94
LAMA5-203ENST00000370691 EEA1Q15075 1411 aa20.95■□□□□ 0.94
LAMA5-203ENST00000370691 BIVM-ERCC5R4GMW8 1640 aa20.94■□□□□ 0.94
LAMA5-203ENST00000370691 CEP164Q9UPV0 1460 aa20.93■□□□□ 0.94
LAMA5-203ENST00000370691 RAD54L2Q9Y4B4 1467 aa20.92■□□□□ 0.94
LAMA5-203ENST00000370691 CUX2O14529 1486 aa20.91■□□□□ 0.94
LAMA5-203ENST00000370691 RAPGEF2Q9Y4G8 1499 aa20.9■□□□□ 0.94
LAMA5-203ENST00000370691 PDS5BQ9NTI5 1447 aa20.9■□□□□ 0.94
LAMA5-203ENST00000370691 LAMC3Q9Y6N6 1575 aa20.89■□□□□ 0.93
LAMA5-203ENST00000370691 KIF27Q86VH2 1401 aa20.87■□□□□ 0.93
LAMA5-203ENST00000370691 PRDM2Q13029 1718 aa20.87■□□□□ 0.93
LAMA5-203ENST00000370691 GOLGA3Q08378 1498 aa20.86■□□□□ 0.93
LAMA5-203ENST00000370691 CEP162Q5TB80 1403 aa20.86■□□□□ 0.93
LAMA5-203ENST00000370691 TOPBP1Q92547 1522 aa20.85■□□□□ 0.93
LAMA5-203ENST00000370691 URB2Q14146 1524 aaKnown RBP20.84■□□□□ 0.93
LAMA5-203ENST00000370691 TNIKQ9UKE5 1360 aa20.81■□□□□ 0.92
LAMA5-203ENST00000370691 POLA1P09884 1462 aaPredicted RBP20.81■□□□□ 0.92
LAMA5-203ENST00000370691 TDRD9Q8NDG6 1382 aaKnown RBP20.8■□□□□ 0.92
LAMA5-203ENST00000370691 KIF21AQ7Z4S6 1674 aa20.79■□□□□ 0.92
LAMA5-203ENST00000370691 DNMBPQ6XZF7 1577 aa20.76■□□□□ 0.91
LAMA5-203ENST00000370691 IGF1RP08069 1367 aa20.74■□□□□ 0.91
LAMA5-203ENST00000370691 ERCC6Q03468 1493 aa20.73■□□□□ 0.91
LAMA5-203ENST00000370691 PRXQ9BXM0 1461 aa20.69■□□□□ 0.9
LAMA5-203ENST00000370691 KIF21BO75037 1637 aa20.68■□□□□ 0.9
LAMA5-203ENST00000370691 CLIP1P30622 1438 aa20.67■□□□□ 0.9
LAMA5-203ENST00000370691 CARMIL1Q5VZK9 1371 aa20.67■□□□□ 0.9
LAMA5-203ENST00000370691 P3H3Q8IVL6 736 aa20.62■□□□□ 0.89
LAMA5-203ENST00000370691 ABCA10Q8WWZ4 1543 aa20.59■□□□□ 0.89
LAMA5-203ENST00000370691 ANP32EQ9BTT0 268 aa20.59■□□□□ 0.89
LAMA5-203ENST00000370691 MRC2Q9UBG0 1479 aa20.59■□□□□ 0.89
LAMA5-203ENST00000370691 AQRO60306 1485 aaKnown RBP eCLIP20.58■□□□□ 0.896e-10■■■□□ 16.9
LAMA5-203ENST00000370691 ERICH6Q7L0X2 663 aa20.58■□□□□ 0.89
LAMA5-203ENST00000370691 GAPVD1Q14C86 1478 aa20.52■□□□□ 0.88
LAMA5-203ENST00000370691 DIEXFQ68CQ4 756 aaKnown RBP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms