RNA–Protein interactions for RNA: ENST00000559359.1

PSME2-208, Transcript of proteasome activator subunit 2, humanhuman

TSL 2

Gene PSME2, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME2-208ENST00000559359 AEBP2Q6ZN18 517 aaPredicted RBP32.55■■■□□ 2.8
PSME2-208ENST00000559359 CHIC1Q5VXU3 224 aa31.36■■■□□ 2.61
PSME2-208ENST00000559359 SENP3Q9H4L4 574 aaPredicted RBP27.76■■■□□ 2.03
PSME2-208ENST00000559359 PHF23Q9BUL5 403 aaPredicted RBP27.49■■□□□ 1.99
PSME2-208ENST00000559359 FOXD1Q16676 465 aa25.77■■□□□ 1.72
PSME2-208ENST00000559359 NISCHQ9Y2I1 1504 aa25.73■■□□□ 1.71
PSME2-208ENST00000559359 PLPPR3Q6T4P5 718 aa25.28■■□□□ 1.64
PSME2-208ENST00000559359 PPP6R1Q9UPN7 881 aa24.4■■□□□ 1.5
PSME2-208ENST00000559359 ADRA2BP18089 450 aa24.36■■□□□ 1.49
PSME2-208ENST00000559359 PIAS4Q8N2W9 510 aaPredicted RBP24.22■■□□□ 1.47
PSME2-208ENST00000559359 MSH5O43196 834 aa24.01■■□□□ 1.43
PSME2-208ENST00000559359 CCDC180Q9P1Z9 1646 aa22.93■■□□□ 1.26
PSME2-208ENST00000559359 ABCC9O60706 1549 aa22.87■■□□□ 1.25
PSME2-208ENST00000559359 POTEDQ86YR6 584 aa22.65■■□□□ 1.22
PSME2-208ENST00000559359 SCAF1Q9H7N4 1312 aaKnown RBP22.36■■□□□ 1.17
PSME2-208ENST00000559359 MAPK8IP2Q13387 824 aaPredicted RBP22.23■■□□□ 1.15
PSME2-208ENST00000559359 PPP4R3CPQ6ZMV5 832 aa22.19■■□□□ 1.14
PSME2-208ENST00000559359 DMRT2Q9Y5R5 561 aa22.06■■□□□ 1.12
PSME2-208ENST00000559359 RB1CC1Q8TDY2 1594 aa21.77■■□□□ 1.08
PSME2-208ENST00000559359 DCAF8L2P0C7V8 631 aa21.76■■□□□ 1.07
PSME2-208ENST00000559359 CNKSR2Q8WXI2 1034 aa21.69■■□□□ 1.06
PSME2-208ENST00000559359 NACADO15069 1562 aa21.66■■□□□ 1.06
PSME2-208ENST00000559359 NCBP3Q53F19 620 aaKnown RBP21.51■■□□□ 1.03
PSME2-208ENST00000559359 HOXD11P31277 338 aaPredicted RBP21.42■■□□□ 1.02
PSME2-208ENST00000559359 RNF216Q9NWF9 866 aaPredicted RBP21.39■■□□□ 1.01
PSME2-208ENST00000559359 MYO15BQ96JP2 1530 aa21.38■■□□□ 1.01
PSME2-208ENST00000559359 PABPN1Q86U42 306 aaKnown RBP eCLIP21.37■■□□□ 1.016e-11■■□□□ 14.2
PSME2-208ENST00000559359 ZCCHC6Q5VYS8 1495 aaKnown RBP21.36■■□□□ 1.01
PSME2-208ENST00000559359 DNAJC5BQ9UF47 199 aa21.31■■□□□ 1
PSME2-208ENST00000559359 UNC13AQ9UPW8 1703 aa21.29■■□□□ 1
PSME2-208ENST00000559359 DCAF1Q9Y4B6 1507 aa21.19■□□□□ 0.98
PSME2-208ENST00000559359 BICRAQ9NZM4 1560 aa21.16■□□□□ 0.98
PSME2-208ENST00000559359 NPM3O75607 178 aaKnown RBP21.16■□□□□ 0.98
PSME2-208ENST00000559359 DCAF8L1A6NGE4 600 aa21.15■□□□□ 0.98
PSME2-208ENST00000559359 KCNA4P22459 653 aa21.13■□□□□ 0.97
PSME2-208ENST00000559359 SCRIBQ14160 1630 aa21.02■□□□□ 0.96
PSME2-208ENST00000559359 SHROOM4Q9ULL8 1493 aa20.8■□□□□ 0.92
PSME2-208ENST00000559359 CC2D2AQ9P2K1 1620 aa20.63■□□□□ 0.89
PSME2-208ENST00000559359 EIF4G1Q04637 1599 aaKnown RBP20.62■□□□□ 0.89
PSME2-208ENST00000559359 CECR2Q9BXF3 1484 aa20.55■□□□□ 0.88
PSME2-208ENST00000559359 RNF39Q9H2S5 420 aa20.5■□□□□ 0.87
PSME2-208ENST00000559359 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.43■□□□□ 0.866e-10■□□□□ 11.3
PSME2-208ENST00000559359 CACNB1Q02641 598 aaPredicted RBP20.32■□□□□ 0.84
PSME2-208ENST00000559359 C1QBPQ07021 282 aaKnown RBP20.24■□□□□ 0.83
PSME2-208ENST00000559359 SLC4A2P04920 1241 aa20.08■□□□□ 0.81
PSME2-208ENST00000559359 SLC4A1APQ9BWU0 796 aaKnown RBP20.06■□□□□ 0.8
PSME2-208ENST00000559359 SMARCA4P51532 1647 aa20.02■□□□□ 0.8
PSME2-208ENST00000559359 U3KPZ7 1027 aaPredicted RBP20.02■□□□□ 0.8
PSME2-208ENST00000559359 NCAPD3P42695 1498 aa20.01■□□□□ 0.79
PSME2-208ENST00000559359 ATAD2BQ9ULI0 1458 aa20■□□□□ 0.79
PSME2-208ENST00000559359 BAZ1AQ9NRL2 1556 aaPredicted RBP19.93■□□□□ 0.78
PSME2-208ENST00000559359 SMARCA2P51531 1590 aa19.92■□□□□ 0.78
PSME2-208ENST00000559359 MROH2BQ7Z745 1585 aa19.86■□□□□ 0.77
PSME2-208ENST00000559359 HMGXB3Q12766 1538 aa19.86■□□□□ 0.77
PSME2-208ENST00000559359 BAZ1BQ9UIG0 1483 aaKnown RBP19.83■□□□□ 0.76
PSME2-208ENST00000559359 PEG3Q9GZU2 1588 aa19.78■□□□□ 0.76
PSME2-208ENST00000559359 NESP48681 1621 aa19.71■□□□□ 0.75
PSME2-208ENST00000559359 ERCC6Q03468 1493 aa19.71■□□□□ 0.75
PSME2-208ENST00000559359 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.66■□□□□ 0.74
PSME2-208ENST00000559359 HNRNPUL2Q1KMD3 747 aaKnown RBP19.66■□□□□ 0.74
PSME2-208ENST00000559359 FOXD4L1Q9NU39 408 aa19.63■□□□□ 0.73
PSME2-208ENST00000559359 WIZO95785 1651 aa19.62■□□□□ 0.73
PSME2-208ENST00000559359 MYCNP04198 464 aaPredicted RBP19.6■□□□□ 0.73
PSME2-208ENST00000559359 APLP2Q06481 763 aa19.59■□□□□ 0.73
PSME2-208ENST00000559359 SPINK5Q9NQ38 1064 aaPredicted RBP19.59■□□□□ 0.73
PSME2-208ENST00000559359 CAPN15O75808 1086 aa19.57■□□□□ 0.72
PSME2-208ENST00000559359 SAMD1Q6SPF0 538 aaPredicted RBP19.56■□□□□ 0.72
PSME2-208ENST00000559359 CUX2O14529 1486 aa19.54■□□□□ 0.72
PSME2-208ENST00000559359 RSF1Q96T23 1441 aaPredicted RBP19.51■□□□□ 0.71
PSME2-208ENST00000559359 LAMC3Q9Y6N6 1575 aa19.51■□□□□ 0.71
PSME2-208ENST00000559359 CADPSQ9ULU8 1353 aa19.44■□□□□ 0.7
PSME2-208ENST00000559359 ZBTB22O15209 634 aa19.42■□□□□ 0.7
PSME2-208ENST00000559359 PDS5BQ9NTI5 1447 aa19.42■□□□□ 0.7
PSME2-208ENST00000559359 KIF21AQ7Z4S6 1674 aa19.41■□□□□ 0.7
PSME2-208ENST00000559359 THOC2Q8NI27 1593 aaKnown RBP19.4■□□□□ 0.7
PSME2-208ENST00000559359 ZNF219Q9P2Y4 722 aaPredicted RBP19.37■□□□□ 0.69
PSME2-208ENST00000559359 TOP2AP11388 1531 aaKnown RBP19.36■□□□□ 0.69
PSME2-208ENST00000559359 DNAJC5Q9H3Z4 198 aa19.36■□□□□ 0.69
PSME2-208ENST00000559359 TRHP20396 242 aaPredicted RBP19.35■□□□□ 0.69
PSME2-208ENST00000559359 DSG3P32926 999 aa19.33■□□□□ 0.68
PSME2-208ENST00000559359 MRC2Q9UBG0 1479 aa19.25■□□□□ 0.67
PSME2-208ENST00000559359 CFTRP13569 1480 aa19.24■□□□□ 0.67
PSME2-208ENST00000559359 FANCD2Q9BXW9 1451 aa19.22■□□□□ 0.67
PSME2-208ENST00000559359 CEP164Q9UPV0 1460 aa19.22■□□□□ 0.67
PSME2-208ENST00000559359 WDR62O43379 1518 aa19.18■□□□□ 0.66
PSME2-208ENST00000559359 CCDC88BA6NC98 1476 aa19.17■□□□□ 0.66
PSME2-208ENST00000559359 ABCB7O75027 752 aa19.14■□□□□ 0.65
PSME2-208ENST00000559359 URB2Q14146 1524 aaKnown RBP19.06■□□□□ 0.64
PSME2-208ENST00000559359 ATF5Q9Y2D1 282 aaPredicted RBP19.05■□□□□ 0.64
PSME2-208ENST00000559359 PRDM2Q13029 1718 aa19.02■□□□□ 0.63
PSME2-208ENST00000559359 ATXN8OSP0DMR3 200 aa18.98■□□□□ 0.63
PSME2-208ENST00000559359 EHMT2Q96KQ7 1210 aa18.94■□□□□ 0.62
PSME2-208ENST00000559359 CSRNP3Q8WYN3 585 aa18.92■□□□□ 0.62
PSME2-208ENST00000559359 POLA2Q14181 598 aa18.91■□□□□ 0.62
PSME2-208ENST00000559359 SUPT5HO00267 1087 aaKnown RBP18.89■□□□□ 0.61
PSME2-208ENST00000559359 TOPBP1Q92547 1522 aa18.88■□□□□ 0.61
PSME2-208ENST00000559359 ZNF608Q9ULD9 1512 aaPredicted RBP18.82■□□□□ 0.6
PSME2-208ENST00000559359 IFT140Q96RY7 1462 aa18.82■□□□□ 0.6
PSME2-208ENST00000559359 DNMBPQ6XZF7 1577 aa18.81■□□□□ 0.6
PSME2-208ENST00000559359 ABCC8Q09428 1581 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms