RNA–Protein interactions for RNA: ENST00000359353.9

DDX42-201, Transcript of DEAD-box helicase 42, humanhuman

TSL 5 BASIC

Gene DDX42, Length 2,783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-201ENST00000359353 NISCHQ9Y2I1 1504 aa48.29■■■■■ 5.32
DDX42-201ENST00000359353 SHROOM4Q9ULL8 1493 aa42.31■■■■■ 4.36
DDX42-201ENST00000359353 SUPT5HO00267 1087 aaKnown RBP41.67■■■■■ 4.26
DDX42-201ENST00000359353 ZCCHC6Q5VYS8 1495 aaKnown RBP40.89■■■■■ 4.14
DDX42-201ENST00000359353 DCAF8L2P0C7V8 631 aa40.72■■■■■ 4.11
DDX42-201ENST00000359353 MYO15BQ96JP2 1530 aa40.55■■■■■ 4.08
DDX42-201ENST00000359353 CCDC180Q9P1Z9 1646 aa40.51■■■■■ 4.07
DDX42-201ENST00000359353 CHIC1Q5VXU3 224 aa40.45■■■■■ 4.07
DDX42-201ENST00000359353 HRCP23327 699 aa40.03■■■■■ 4
DDX42-201ENST00000359353 PCGF6Q9BYE7 350 aa39.98■■■■□ 3.99
DDX42-201ENST00000359353 LOC105371045A0A1W2PR82 267 aa39.59■■■■□ 3.93
DDX42-201ENST00000359353 PPARGC1BQ86YN6 1023 aaKnown RBP39.59■■■■□ 3.93
DDX42-201ENST00000359353 DCAF1Q9Y4B6 1507 aa39.23■■■■□ 3.87
DDX42-201ENST00000359353 TRIM26Q12899 539 aaPredicted RBP38.74■■■■□ 3.79
DDX42-201ENST00000359353 ABCC9O60706 1549 aa38.69■■■■□ 3.78
DDX42-201ENST00000359353 SCRIBQ14160 1630 aa38.64■■■■□ 3.78
DDX42-201ENST00000359353 FAM9AQ8IZU1 332 aaPredicted RBP38.62■■■■□ 3.77
DDX42-201ENST00000359353 EHMT2Q96KQ7 1210 aa38.6■■■■□ 3.77
DDX42-201ENST00000359353 RSF1Q96T23 1441 aaPredicted RBP38.54■■■■□ 3.76
DDX42-201ENST00000359353 TRIM41Q8WV44 630 aa38.51■■■■□ 3.76
DDX42-201ENST00000359353 RB1CC1Q8TDY2 1594 aa38.35■■■■□ 3.73
DDX42-201ENST00000359353 CECR2Q9BXF3 1484 aa37.95■■■■□ 3.67
DDX42-201ENST00000359353 ZEB1P37275 1124 aaPredicted RBP37.88■■■■□ 3.65
DDX42-201ENST00000359353 MROH2BQ7Z745 1585 aa37.77■■■■□ 3.64
DDX42-201ENST00000359353 WIZO95785 1651 aa37.64■■■■□ 3.62
DDX42-201ENST00000359353 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.47■■■■□ 3.59
DDX42-201ENST00000359353 TTBK1Q5TCY1 1321 aaPredicted RBP37.43■■■■□ 3.58
DDX42-201ENST00000359353 NACADO15069 1562 aa37.42■■■■□ 3.58
DDX42-201ENST00000359353 SCAF1Q9H7N4 1312 aaKnown RBP37.4■■■■□ 3.58
DDX42-201ENST00000359353 CCER1Q8TC90 406 aaPredicted RBP37.25■■■■□ 3.55
DDX42-201ENST00000359353 BAZ1AQ9NRL2 1556 aaPredicted RBP37.16■■■■□ 3.54
DDX42-201ENST00000359353 ABCC8Q09428 1581 aa37.12■■■■□ 3.53
DDX42-201ENST00000359353 EIF4G1Q04637 1599 aaKnown RBP37.06■■■■□ 3.52
DDX42-201ENST00000359353 CCDC88BA6NC98 1476 aa37.01■■■■□ 3.51
DDX42-201ENST00000359353 SOGA1O94964 1423 aa36.85■■■■□ 3.49
DDX42-201ENST00000359353 NEUROD1Q13562 356 aa36.8■■■■□ 3.48
DDX42-201ENST00000359353 CEP162Q5TB80 1403 aa36.79■■■■□ 3.48
DDX42-201ENST00000359353 TOP2AP11388 1531 aaKnown RBP36.77■■■■□ 3.48
DDX42-201ENST00000359353 DIEXFQ68CQ4 756 aaKnown RBP36.74■■■■□ 3.47
DDX42-201ENST00000359353 UBTFP17480 764 aaKnown RBP36.72■■■■□ 3.47
DDX42-201ENST00000359353 RUSC2Q8N2Y8 1516 aa36.71■■■■□ 3.47
DDX42-201ENST00000359353 ACIN1Q9UKV3 1341 aaKnown RBP36.7■■■■□ 3.47
DDX42-201ENST00000359353 SMARCA2P51531 1590 aa36.69■■■■□ 3.46
DDX42-201ENST00000359353 SMARCA4P51532 1647 aa36.69■■■■□ 3.46
DDX42-201ENST00000359353 PELP1Q8IZL8 1130 aaKnown RBP36.66■■■■□ 3.46
DDX42-201ENST00000359353 WRNQ14191 1432 aaPredicted RBP eCLIP36.6■■■■□ 3.45
DDX42-201ENST00000359353 CSRNP3Q8WYN3 585 aa36.57■■■■□ 3.44
DDX42-201ENST00000359353 TNIKQ9UKE5 1360 aa36.52■■■■□ 3.44
DDX42-201ENST00000359353 UNC13AQ9UPW8 1703 aa36.48■■■■□ 3.43
DDX42-201ENST00000359353 GTF3C3Q9Y5Q9 886 aa36.48■■■■□ 3.43
DDX42-201ENST00000359353 PABPN1Q86U42 306 aaKnown RBP eCLIP36.47■■■■□ 3.431e-6■■□□□ 14.2
DDX42-201ENST00000359353 HNRNPUL2Q1KMD3 747 aaKnown RBP36.34■■■■□ 3.41
DDX42-201ENST00000359353 CENPBP07199 599 aaPredicted RBP36.32■■■■□ 3.4
DDX42-201ENST00000359353 RANGAP1P46060 587 aaPredicted RBP36.28■■■■□ 3.4
DDX42-201ENST00000359353 YTHDC1Q96MU7 727 aaKnown RBP36.27■■■■□ 3.4
DDX42-201ENST00000359353 GOLGA3Q08378 1498 aa36.25■■■■□ 3.39
DDX42-201ENST00000359353 EEA1Q15075 1411 aa36.23■■■■□ 3.39
DDX42-201ENST00000359353 ZNF316A6NFI3 1004 aaPredicted RBP36.22■■■■□ 3.39
DDX42-201ENST00000359353 SYNJ1O43426 1573 aa36.05■■■■□ 3.36
DDX42-201ENST00000359353 BICRAQ9NZM4 1560 aa36.02■■■■□ 3.36
DDX42-201ENST00000359353 CLIP1P30622 1438 aa35.99■■■■□ 3.35
DDX42-201ENST00000359353 MIER1Q8N108 512 aa35.98■■■■□ 3.35
DDX42-201ENST00000359353 CEP164Q9UPV0 1460 aa35.95■■■■□ 3.35
DDX42-201ENST00000359353 APLP2Q06481 763 aa35.86■■■■□ 3.33
DDX42-201ENST00000359353 RAPGEF2Q9Y4G8 1499 aa35.85■■■■□ 3.33
DDX42-201ENST00000359353 KIF21BO75037 1637 aa35.8■■■■□ 3.32
DDX42-201ENST00000359353 VPS8Q8N3P4 1428 aa35.79■■■■□ 3.32
DDX42-201ENST00000359353 PEG3Q9GZU2 1588 aa35.69■■■■□ 3.3
DDX42-201ENST00000359353 ATAD2BQ9ULI0 1458 aa35.67■■■■□ 3.3
DDX42-201ENST00000359353 BAZ1BQ9UIG0 1483 aaKnown RBP35.65■■■■□ 3.3
DDX42-201ENST00000359353 KANK4Q5T7N3 995 aaPredicted RBP35.47■■■■□ 3.27
DDX42-201ENST00000359353 TOP2BQ02880 1626 aa35.36■■■■□ 3.25
DDX42-201ENST00000359353 DHX57Q6P158 1386 aaKnown RBP35.35■■■■□ 3.25
DDX42-201ENST00000359353 ARAP1Q96P48 1450 aa35.31■■■■□ 3.24
DDX42-201ENST00000359353 ITGAEP38570 1179 aa35.3■■■■□ 3.24
DDX42-201ENST00000359353 PRXQ9BXM0 1461 aa35.2■■■■□ 3.22
DDX42-201ENST00000359353 BIVM-ERCC5R4GMW8 1640 aa35.15■■■■□ 3.22
DDX42-201ENST00000359353 ERICH3Q5RHP9 1530 aa35.1■■■■□ 3.21
DDX42-201ENST00000359353 CUX1P39880 1505 aa35.07■■■■□ 3.2
DDX42-201ENST00000359353 CLSPNQ9HAW4 1339 aa35.04■■■■□ 3.2
DDX42-201ENST00000359353 KIF27Q86VH2 1401 aa34.97■■■■□ 3.19
DDX42-201ENST00000359353 RRBP1Q9P2E9 1410 aaKnown RBP34.96■■■■□ 3.19
DDX42-201ENST00000359353 CCNB3Q8WWL7 1395 aa34.94■■■■□ 3.18
DDX42-201ENST00000359353 ARHGAP35Q9NRY4 1499 aa34.93■■■■□ 3.18
DDX42-201ENST00000359353 SUPT16HQ9Y5B9 1047 aaKnown RBP34.91■■■■□ 3.18
DDX42-201ENST00000359353 KCNH8Q96L42 1107 aa34.91■■■■□ 3.18
DDX42-201ENST00000359353 RAB3GAP2Q9H2M9 1393 aa34.79■■■■□ 3.16
DDX42-201ENST00000359353 MYT1Q01538 1121 aa34.74■■■■□ 3.15
DDX42-201ENST00000359353 NCAPD3P42695 1498 aa34.72■■■■□ 3.15
DDX42-201ENST00000359353 P3H3Q8IVL6 736 aa34.72■■■■□ 3.15
DDX42-201ENST00000359353 ATP1B4Q9UN42 357 aaPredicted RBP34.7■■■■□ 3.15
DDX42-201ENST00000359353 CUX2O14529 1486 aa34.7■■■■□ 3.15
DDX42-201ENST00000359353 SIN3AQ96ST3 1273 aa34.69■■■■□ 3.14
DDX42-201ENST00000359353 FAM50AQ14320 339 aaKnown RBP34.68■■■■□ 3.14
DDX42-201ENST00000359353 HMGXB3Q12766 1538 aa34.68■■■■□ 3.14
DDX42-201ENST00000359353 CFTRP13569 1480 aa34.67■■■■□ 3.14
DDX42-201ENST00000359353 MAPKBP1O60336 1514 aa34.65■■■■□ 3.14
DDX42-201ENST00000359353 IGF1RP08069 1367 aa34.62■■■■□ 3.13
DDX42-201ENST00000359353 HIRIP3Q9BW71 556 aaPredicted RBP34.62■■■■□ 3.13
DDX42-201ENST00000359353 DDX10Q13206 875 aaKnown RBP34.6■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms