RNA–Protein interactions for RNA: ENST00000530848.5

EEF1D-235, Transcript of eukaryotic translation elongation factor 1 delta, humanhuman

TSL 3

Gene EEF1D, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EEF1D-235ENST00000530848 NISCHQ9Y2I1 1504 aa47.86■■■■■ 5.25
EEF1D-235ENST00000530848 CCDC180Q9P1Z9 1646 aa42.67■■■■■ 4.42
EEF1D-235ENST00000530848 ABCC9O60706 1549 aa42.29■■■■■ 4.36
EEF1D-235ENST00000530848 RB1CC1Q8TDY2 1594 aa40.4■■■■■ 4.06
EEF1D-235ENST00000530848 NACADO15069 1562 aa40.26■■■■■ 4.04
EEF1D-235ENST00000530848 DCAF8L2P0C7V8 631 aa40.19■■■■■ 4.02
EEF1D-235ENST00000530848 MYO15BQ96JP2 1530 aa39.86■■■■□ 3.97
EEF1D-235ENST00000530848 ZCCHC6Q5VYS8 1495 aaKnown RBP39.78■■■■□ 3.96
EEF1D-235ENST00000530848 DCAF1Q9Y4B6 1507 aa39.54■■■■□ 3.92
EEF1D-235ENST00000530848 PABPN1Q86U42 306 aaKnown RBP eCLIP39.47■■■■□ 3.912e-7■■□□□ 14.1
EEF1D-235ENST00000530848 UNC13AQ9UPW8 1703 aa39.46■■■■□ 3.91
EEF1D-235ENST00000530848 DNAJC5BQ9UF47 199 aa39.28■■■■□ 3.88
EEF1D-235ENST00000530848 BICRAQ9NZM4 1560 aa39.26■■■■□ 3.88
EEF1D-235ENST00000530848 SCRIBQ14160 1630 aa38.97■■■■□ 3.83
EEF1D-235ENST00000530848 SHROOM4Q9ULL8 1493 aa38.73■■■■□ 3.79
EEF1D-235ENST00000530848 EIF4G1Q04637 1599 aaKnown RBP38.24■■■■□ 3.71
EEF1D-235ENST00000530848 CC2D2AQ9P2K1 1620 aa38.19■■■■□ 3.7
EEF1D-235ENST00000530848 CECR2Q9BXF3 1484 aa38.03■■■■□ 3.68
EEF1D-235ENST00000530848 SMARCA4P51532 1647 aa37.21■■■■□ 3.55
EEF1D-235ENST00000530848 NCAPD3P42695 1498 aa37.19■■■■□ 3.54
EEF1D-235ENST00000530848 ATAD2BQ9ULI0 1458 aa37.16■■■■□ 3.54
EEF1D-235ENST00000530848 BAZ1AQ9NRL2 1556 aaPredicted RBP37.08■■■■□ 3.53
EEF1D-235ENST00000530848 SMARCA2P51531 1590 aa37.04■■■■□ 3.52
EEF1D-235ENST00000530848 HMGXB3Q12766 1538 aa36.94■■■■□ 3.5
EEF1D-235ENST00000530848 MROH2BQ7Z745 1585 aa36.91■■■■□ 3.5
EEF1D-235ENST00000530848 PEG3Q9GZU2 1588 aa36.84■■■■□ 3.49
EEF1D-235ENST00000530848 BAZ1BQ9UIG0 1483 aaKnown RBP36.81■■■■□ 3.48
EEF1D-235ENST00000530848 NESP48681 1621 aa36.48■■■■□ 3.43
EEF1D-235ENST00000530848 WIZO95785 1651 aa36.45■■■■□ 3.43
EEF1D-235ENST00000530848 ERCC6Q03468 1493 aa36.44■■■■□ 3.42
EEF1D-235ENST00000530848 RSF1Q96T23 1441 aaPredicted RBP36.33■■■■□ 3.41
EEF1D-235ENST00000530848 LAMC3Q9Y6N6 1575 aa36.23■■■■□ 3.39
EEF1D-235ENST00000530848 CUX2O14529 1486 aa36.2■■■■□ 3.39
EEF1D-235ENST00000530848 CADPSQ9ULU8 1353 aa36.09■■■■□ 3.37
EEF1D-235ENST00000530848 TOP2AP11388 1531 aaKnown RBP36.03■■■■□ 3.36
EEF1D-235ENST00000530848 PDS5BQ9NTI5 1447 aa36.03■■■■□ 3.36
EEF1D-235ENST00000530848 THOC2Q8NI27 1593 aaKnown RBP35.98■■■■□ 3.35
EEF1D-235ENST00000530848 KIF21AQ7Z4S6 1674 aa35.95■■■■□ 3.35
EEF1D-235ENST00000530848 CFTRP13569 1480 aa35.78■■■■□ 3.32
EEF1D-235ENST00000530848 MRC2Q9UBG0 1479 aa35.71■■■■□ 3.31
EEF1D-235ENST00000530848 FANCD2Q9BXW9 1451 aa35.67■■■■□ 3.3
EEF1D-235ENST00000530848 DNAJC5Q9H3Z4 198 aa35.66■■■■□ 3.3
EEF1D-235ENST00000530848 CEP164Q9UPV0 1460 aa35.66■■■■□ 3.3
EEF1D-235ENST00000530848 CCDC88BA6NC98 1476 aa35.64■■■■□ 3.3
EEF1D-235ENST00000530848 WDR62O43379 1518 aa35.6■■■■□ 3.29
EEF1D-235ENST00000530848 URB2Q14146 1524 aaKnown RBP35.37■■■■□ 3.25
EEF1D-235ENST00000530848 PRDM2Q13029 1718 aa35.35■■■■□ 3.25
EEF1D-235ENST00000530848 SUPT5HO00267 1087 aaKnown RBP35.07■■■■□ 3.2
EEF1D-235ENST00000530848 TOPBP1Q92547 1522 aa35.06■■■■□ 3.2
EEF1D-235ENST00000530848 ABCC8Q09428 1581 aa34.96■■■■□ 3.19
EEF1D-235ENST00000530848 DNMBPQ6XZF7 1577 aa34.95■■■■□ 3.18
EEF1D-235ENST00000530848 IFT140Q96RY7 1462 aa34.91■■■■□ 3.18
EEF1D-235ENST00000530848 ZNF608Q9ULD9 1512 aaPredicted RBP34.86■■■■□ 3.17
EEF1D-235ENST00000530848 POLA1P09884 1462 aaPredicted RBP34.74■■■■□ 3.15
EEF1D-235ENST00000530848 TARBP1Q13395 1621 aaKnown RBP34.7■■■■□ 3.14
EEF1D-235ENST00000530848 CUX1P39880 1505 aa34.65■■■■□ 3.14
EEF1D-235ENST00000530848 EIF4G3O43432 1585 aaKnown RBP34.65■■■■□ 3.14
EEF1D-235ENST00000530848 OSCARQ8IYS5 282 aa34.63■■■■□ 3.13
EEF1D-235ENST00000530848 RAD54L2Q9Y4B4 1467 aa34.62■■■■□ 3.13
EEF1D-235ENST00000530848 AQRO60306 1485 aaKnown RBP eCLIP34.6■■■■□ 3.139e-8■■■■■ 45.4
EEF1D-235ENST00000530848 FGD5Q6ZNL6 1462 aa34.58■■■■□ 3.13
EEF1D-235ENST00000530848 SOGA1O94964 1423 aa34.57■■■■□ 3.13
EEF1D-235ENST00000530848 TDRD9Q8NDG6 1382 aaKnown RBP34.47■■■■□ 3.11
EEF1D-235ENST00000530848 WDR97A6NE52 1622 aa34.33■■■■□ 3.09
EEF1D-235ENST00000530848 TRIM41Q8WV44 630 aa34.31■■■■□ 3.08
EEF1D-235ENST00000530848 CHD1O14646 1710 aa34.27■■■■□ 3.08
EEF1D-235ENST00000530848 SNAPC4Q5SXM2 1469 aa34.26■■■■□ 3.07
EEF1D-235ENST00000530848 FBLN2P98095 1184 aa34.25■■■■□ 3.07
EEF1D-235ENST00000530848 WRNQ14191 1432 aaPredicted RBP eCLIP34.23■■■■□ 3.072e-6■■■□□ 16.6
EEF1D-235ENST00000530848 GRIN2BQ13224 1484 aa34.21■■■■□ 3.07
EEF1D-235ENST00000530848 ABCA10Q8WWZ4 1543 aa34.21■■■■□ 3.07
EEF1D-235ENST00000530848 SYNJ1O43426 1573 aa34.19■■■■□ 3.06
EEF1D-235ENST00000530848 TOP2BQ02880 1626 aa34.19■■■■□ 3.06
EEF1D-235ENST00000530848 BIVM-ERCC5R4GMW8 1640 aa34.16■■■■□ 3.06
EEF1D-235ENST00000530848 GAPVD1Q14C86 1478 aa34.16■■■■□ 3.06
EEF1D-235ENST00000530848 MAGI1Q96QZ7 1491 aaPredicted RBP34.16■■■■□ 3.06
EEF1D-235ENST00000530848 RIMBP3CA6NJZ7 1639 aa34.13■■■■□ 3.05
EEF1D-235ENST00000530848 RIMBP3BA6NNM3 1639 aa34.13■■■■□ 3.05
EEF1D-235ENST00000530848 RIMBP3Q9UFD9 1639 aa34.13■■■■□ 3.05
EEF1D-235ENST00000530848 ABCA5Q8WWZ7 1642 aa34.11■■■■□ 3.05
EEF1D-235ENST00000530848 ARHGEF11O15085 1522 aa34.09■■■■□ 3.05
EEF1D-235ENST00000530848 CHMP7Q8WUX9 453 aaPredicted RBP34.07■■■■□ 3.04
EEF1D-235ENST00000530848 PBRM1Q86U86 1689 aa34.06■■■■□ 3.04
EEF1D-235ENST00000530848 SYNJ2O15056 1496 aa34.05■■■■□ 3.04
EEF1D-235ENST00000530848 CLASP1Q7Z460 1538 aa33.94■■■■□ 3.02
EEF1D-235ENST00000530848 ADAMTS12P58397 1594 aa33.82■■■■□ 3
EEF1D-235ENST00000530848 CYB5RLQ6IPT4 315 aa33.82■■■■□ 3
EEF1D-235ENST00000530848 ARAP1Q96P48 1450 aa33.82■■■■□ 3
EEF1D-235ENST00000530848 GRIN2AQ12879 1464 aa33.78■■■■□ 3
EEF1D-235ENST00000530848 ERICH3Q5RHP9 1530 aa33.77■■■■□ 3
EEF1D-235ENST00000530848 FHAD1B1AJZ9 1412 aa33.75■■■□□ 2.99
EEF1D-235ENST00000530848 NUP160Q12769 1436 aa33.67■■■□□ 2.98
EEF1D-235ENST00000530848 CEP170Q5SW79 1584 aa33.64■■■□□ 2.98
EEF1D-235ENST00000530848 KIF27Q86VH2 1401 aa33.54■■■□□ 2.96
EEF1D-235ENST00000530848 IGF1RP08069 1367 aa33.5■■■□□ 2.95
EEF1D-235ENST00000530848 ERCC6L2Q5T890 1561 aa33.47■■■□□ 2.95
EEF1D-235ENST00000530848 SHROOM2Q13796 1616 aa33.42■■■□□ 2.94
EEF1D-235ENST00000530848 CUL7Q14999 1698 aa33.35■■■□□ 2.93
EEF1D-235ENST00000530848 RUSC2Q8N2Y8 1516 aa33.33■■■□□ 2.93
EEF1D-235ENST00000530848 JPH4Q96JJ6 628 aa33.31■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms