RNA–Protein interactions for RNA: ENST00000560631.1

RNF31-222, Transcript of ring finger protein 31, humanhuman

TSL 2

Gene RNF31, Length 320 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31-222ENST00000560631 AEBP2Q6ZN18 517 aaPredicted RBP21.6■■□□□ 1.05
RNF31-222ENST00000560631 CHIC1Q5VXU3 224 aa20.36■□□□□ 0.85
RNF31-222ENST00000560631 NISCHQ9Y2I1 1504 aa19.47■□□□□ 0.71
RNF31-222ENST00000560631 SENP3Q9H4L4 574 aaPredicted RBP18.55■□□□□ 0.56
RNF31-222ENST00000560631 PHF23Q9BUL5 403 aaPredicted RBP18.23■□□□□ 0.51
RNF31-222ENST00000560631 CCDC180Q9P1Z9 1646 aa17.29■□□□□ 0.36
RNF31-222ENST00000560631 FOXD1Q16676 465 aa17.28■□□□□ 0.36
RNF31-222ENST00000560631 ABCC9O60706 1549 aa16.75■□□□□ 0.27
RNF31-222ENST00000560631 POTEDQ86YR6 584 aa16.56■□□□□ 0.24
RNF31-222ENST00000560631 MSH5O43196 834 aa16.38■□□□□ 0.21
RNF31-222ENST00000560631 NACADO15069 1562 aa16.25■□□□□ 0.19
RNF31-222ENST00000560631 MYO15BQ96JP2 1530 aa16.23■□□□□ 0.19
RNF31-222ENST00000560631 ZCCHC6Q5VYS8 1495 aaKnown RBP16.22■□□□□ 0.19
RNF31-222ENST00000560631 RB1CC1Q8TDY2 1594 aa16.22■□□□□ 0.19
RNF31-222ENST00000560631 PLPPR3Q6T4P5 718 aa16.18■□□□□ 0.18
RNF31-222ENST00000560631 DCAF1Q9Y4B6 1507 aa16.17■□□□□ 0.18
RNF31-222ENST00000560631 DCAF8L2P0C7V8 631 aa16.12■□□□□ 0.17
RNF31-222ENST00000560631 PIAS4Q8N2W9 510 aaPredicted RBP16.1■□□□□ 0.17
RNF31-222ENST00000560631 PPP6R1Q9UPN7 881 aa16■□□□□ 0.15
RNF31-222ENST00000560631 ADRA2BP18089 450 aa15.91■□□□□ 0.14
RNF31-222ENST00000560631 UNC13AQ9UPW8 1703 aa15.88■□□□□ 0.13
RNF31-222ENST00000560631 BICRAQ9NZM4 1560 aa15.74■□□□□ 0.11
RNF31-222ENST00000560631 SCRIBQ14160 1630 aa15.69■□□□□ 0.1
RNF31-222ENST00000560631 PABPN1Q86U42 306 aaKnown RBP eCLIP15.66■□□□□ 0.11e-9■■□□□ 14.1
RNF31-222ENST00000560631 SHROOM4Q9ULL8 1493 aa15.62■□□□□ 0.09
RNF31-222ENST00000560631 DNAJC5BQ9UF47 199 aa15.35■□□□□ 0.05
RNF31-222ENST00000560631 EIF4G1Q04637 1599 aaKnown RBP15.29■□□□□ 0.04
RNF31-222ENST00000560631 CC2D2AQ9P2K1 1620 aa15.21■□□□□ 0.02
RNF31-222ENST00000560631 CECR2Q9BXF3 1484 aa15.12■□□□□ 0.01
RNF31-222ENST00000560631 BAZ1AQ9NRL2 1556 aaPredicted RBP15.07■□□□□ 0
RNF31-222ENST00000560631 SMARCA4P51532 1647 aa15.07■□□□□ 0
RNF31-222ENST00000560631 NCAPD3P42695 1498 aa15□□□□□ -0.01
RNF31-222ENST00000560631 ATAD2BQ9ULI0 1458 aa14.99□□□□□ -0.01
RNF31-222ENST00000560631 SMARCA2P51531 1590 aa14.98□□□□□ -0.01
RNF31-222ENST00000560631 MROH2BQ7Z745 1585 aa14.98□□□□□ -0.01
RNF31-222ENST00000560631 PEG3Q9GZU2 1588 aa14.98□□□□□ -0.01
RNF31-222ENST00000560631 HMGXB3Q12766 1538 aa14.92□□□□□ -0.02
RNF31-222ENST00000560631 RSF1Q96T23 1441 aaPredicted RBP14.85□□□□□ -0.03
RNF31-222ENST00000560631 BAZ1BQ9UIG0 1483 aaKnown RBP14.83□□□□□ -0.03
RNF31-222ENST00000560631 WIZO95785 1651 aa14.81□□□□□ -0.04
RNF31-222ENST00000560631 TOP2AP11388 1531 aaKnown RBP14.67□□□□□ -0.06
RNF31-222ENST00000560631 MAPK8IP2Q13387 824 aaPredicted RBP14.65□□□□□ -0.06
RNF31-222ENST00000560631 DMRT2Q9Y5R5 561 aa14.62□□□□□ -0.07
RNF31-222ENST00000560631 LAMC3Q9Y6N6 1575 aa14.57□□□□□ -0.08
RNF31-222ENST00000560631 SCAF1Q9H7N4 1312 aaKnown RBP14.55□□□□□ -0.08
RNF31-222ENST00000560631 CADPSQ9ULU8 1353 aa14.54□□□□□ -0.08
RNF31-222ENST00000560631 NESP48681 1621 aa14.53□□□□□ -0.08
RNF31-222ENST00000560631 CCDC88BA6NC98 1476 aa14.5□□□□□ -0.09
RNF31-222ENST00000560631 CFTRP13569 1480 aa14.48□□□□□ -0.09
RNF31-222ENST00000560631 PDS5BQ9NTI5 1447 aa14.46□□□□□ -0.09
RNF31-222ENST00000560631 SUPT5HO00267 1087 aaKnown RBP14.44□□□□□ -0.1
RNF31-222ENST00000560631 ERCC6Q03468 1493 aa14.44□□□□□ -0.1
RNF31-222ENST00000560631 PRDM2Q13029 1718 aa14.41□□□□□ -0.1
RNF31-222ENST00000560631 KIF21AQ7Z4S6 1674 aa14.39□□□□□ -0.11
RNF31-222ENST00000560631 FANCD2Q9BXW9 1451 aa14.34□□□□□ -0.11
RNF31-222ENST00000560631 THOC2Q8NI27 1593 aaKnown RBP14.34□□□□□ -0.11
RNF31-222ENST00000560631 CUX2O14529 1486 aa14.33□□□□□ -0.12
RNF31-222ENST00000560631 CEP164Q9UPV0 1460 aa14.31□□□□□ -0.12
RNF31-222ENST00000560631 CACNB1Q02641 598 aaPredicted RBP14.28□□□□□ -0.12
RNF31-222ENST00000560631 MRC2Q9UBG0 1479 aa14.28□□□□□ -0.12
RNF31-222ENST00000560631 WDR62O43379 1518 aa14.25□□□□□ -0.13
RNF31-222ENST00000560631 URB2Q14146 1524 aaKnown RBP14.2□□□□□ -0.14
RNF31-222ENST00000560631 ABCC8Q09428 1581 aa14.18□□□□□ -0.14
RNF31-222ENST00000560631 PPP4R3CPQ6ZMV5 832 aa14.18□□□□□ -0.14
RNF31-222ENST00000560631 TOPBP1Q92547 1522 aa14.14□□□□□ -0.15
RNF31-222ENST00000560631 DNMBPQ6XZF7 1577 aa14.13□□□□□ -0.15
RNF31-222ENST00000560631 DCAF8L1A6NGE4 600 aa14.1□□□□□ -0.15
RNF31-222ENST00000560631 CUX1P39880 1505 aa14.05□□□□□ -0.16
RNF31-222ENST00000560631 IFT140Q96RY7 1462 aa14.04□□□□□ -0.16
RNF31-222ENST00000560631 POLA1P09884 1462 aaPredicted RBP14.01□□□□□ -0.17
RNF31-222ENST00000560631 HOXD11P31277 338 aaPredicted RBP14.01□□□□□ -0.17
RNF31-222ENST00000560631 TARBP1Q13395 1621 aaKnown RBP13.99□□□□□ -0.17
RNF31-222ENST00000560631 WRNQ14191 1432 aaPredicted RBP eCLIP13.98□□□□□ -0.17
RNF31-222ENST00000560631 BIVM-ERCC5R4GMW8 1640 aa13.97□□□□□ -0.17
RNF31-222ENST00000560631 FGD5Q6ZNL6 1462 aa13.97□□□□□ -0.17
RNF31-222ENST00000560631 TOP2BQ02880 1626 aa13.97□□□□□ -0.17
RNF31-222ENST00000560631 SOGA1O94964 1423 aa13.96□□□□□ -0.18
RNF31-222ENST00000560631 CNKSR2Q8WXI2 1034 aa13.93□□□□□ -0.18
RNF31-222ENST00000560631 ZNF608Q9ULD9 1512 aaPredicted RBP13.93□□□□□ -0.18
RNF31-222ENST00000560631 WDR97A6NE52 1622 aa13.93□□□□□ -0.18
RNF31-222ENST00000560631 RAD54L2Q9Y4B4 1467 aa13.93□□□□□ -0.18
RNF31-222ENST00000560631 SYNJ1O43426 1573 aa13.92□□□□□ -0.18
RNF31-222ENST00000560631 RNF39Q9H2S5 420 aa13.9□□□□□ -0.18
RNF31-222ENST00000560631 ABCA10Q8WWZ4 1543 aa13.89□□□□□ -0.19
RNF31-222ENST00000560631 EIF4G3O43432 1585 aaKnown RBP13.88□□□□□ -0.19
RNF31-222ENST00000560631 AQRO60306 1485 aaKnown RBP eCLIP13.87□□□□□ -0.191e-9■■■□□ 14.9
RNF31-222ENST00000560631 RNF216Q9NWF9 866 aaPredicted RBP13.85□□□□□ -0.19
RNF31-222ENST00000560631 TDRD9Q8NDG6 1382 aaKnown RBP13.84□□□□□ -0.19
RNF31-222ENST00000560631 ABCA5Q8WWZ7 1642 aa13.81□□□□□ -0.2
RNF31-222ENST00000560631 GAPVD1Q14C86 1478 aa13.8□□□□□ -0.2
RNF31-222ENST00000560631 DNAJC5Q9H3Z4 198 aa13.8□□□□□ -0.2
RNF31-222ENST00000560631 GRIN2BQ13224 1484 aa13.8□□□□□ -0.2
RNF31-222ENST00000560631 PBRM1Q86U86 1689 aa13.77□□□□□ -0.21
RNF31-222ENST00000560631 MAGI1Q96QZ7 1491 aaPredicted RBP13.76□□□□□ -0.21
RNF31-222ENST00000560631 SNAPC4Q5SXM2 1469 aa13.74□□□□□ -0.21
RNF31-222ENST00000560631 OSCARQ8IYS5 282 aa13.73□□□□□ -0.21
RNF31-222ENST00000560631 ERICH3Q5RHP9 1530 aa13.73□□□□□ -0.21
RNF31-222ENST00000560631 CHD1O14646 1710 aa13.71□□□□□ -0.21
RNF31-222ENST00000560631 C1QBPQ07021 282 aaKnown RBP13.71□□□□□ -0.21
RNF31-222ENST00000560631 SYNJ2O15056 1496 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms