RNA–Protein interactions for RNA: ENST00000583697.1

CDK5RAP3-229, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-229ENST00000583697 NISCHQ9Y2I1 1504 aa21.8■■□□□ 1.08
CDK5RAP3-229ENST00000583697 CCDC180Q9P1Z9 1646 aa19.67■□□□□ 0.74
CDK5RAP3-229ENST00000583697 ABCC9O60706 1549 aa19.51■□□□□ 0.71
CDK5RAP3-229ENST00000583697 RB1CC1Q8TDY2 1594 aa18.66■□□□□ 0.58
CDK5RAP3-229ENST00000583697 NACADO15069 1562 aa18.51■□□□□ 0.55
CDK5RAP3-229ENST00000583697 DCAF8L2P0C7V8 631 aa18.29■□□□□ 0.52
CDK5RAP3-229ENST00000583697 UNC13AQ9UPW8 1703 aa18.26■□□□□ 0.51
CDK5RAP3-229ENST00000583697 MYO15BQ96JP2 1530 aa18.25■□□□□ 0.51
CDK5RAP3-229ENST00000583697 ZCCHC6Q5VYS8 1495 aaKnown RBP18.12■□□□□ 0.49
CDK5RAP3-229ENST00000583697 DNAJC5BQ9UF47 199 aa18.08■□□□□ 0.48
CDK5RAP3-229ENST00000583697 PABPN1Q86U42 306 aaKnown RBP eCLIP18.07■□□□□ 0.482e-10■■□□□ 14.3
CDK5RAP3-229ENST00000583697 BICRAQ9NZM4 1560 aa18.04■□□□□ 0.48
CDK5RAP3-229ENST00000583697 DCAF1Q9Y4B6 1507 aa18.04■□□□□ 0.48
CDK5RAP3-229ENST00000583697 SCRIBQ14160 1630 aa17.89■□□□□ 0.45
CDK5RAP3-229ENST00000583697 SHROOM4Q9ULL8 1493 aa17.88■□□□□ 0.45
CDK5RAP3-229ENST00000583697 CC2D2AQ9P2K1 1620 aa17.66■□□□□ 0.42
CDK5RAP3-229ENST00000583697 EIF4G1Q04637 1599 aaKnown RBP17.65■□□□□ 0.42
CDK5RAP3-229ENST00000583697 CECR2Q9BXF3 1484 aa17.56■□□□□ 0.4
CDK5RAP3-229ENST00000583697 SMARCA4P51532 1647 aa17.06■□□□□ 0.32
CDK5RAP3-229ENST00000583697 SMARCA2P51531 1590 aa17.02■□□□□ 0.31
CDK5RAP3-229ENST00000583697 NCAPD3P42695 1498 aa17.01■□□□□ 0.31
CDK5RAP3-229ENST00000583697 HMGXB3Q12766 1538 aa16.99■□□□□ 0.31
CDK5RAP3-229ENST00000583697 ATAD2BQ9ULI0 1458 aa16.99■□□□□ 0.31
CDK5RAP3-229ENST00000583697 BAZ1AQ9NRL2 1556 aaPredicted RBP16.98■□□□□ 0.31
CDK5RAP3-229ENST00000583697 ERCC6Q03468 1493 aa16.89■□□□□ 0.29
CDK5RAP3-229ENST00000583697 BAZ1BQ9UIG0 1483 aaKnown RBP16.88■□□□□ 0.29
CDK5RAP3-229ENST00000583697 PEG3Q9GZU2 1588 aa16.87■□□□□ 0.29
CDK5RAP3-229ENST00000583697 CUX2O14529 1486 aa16.83■□□□□ 0.28
CDK5RAP3-229ENST00000583697 MROH2BQ7Z745 1585 aa16.79■□□□□ 0.28
CDK5RAP3-229ENST00000583697 NESP48681 1621 aa16.74■□□□□ 0.27
CDK5RAP3-229ENST00000583697 LAMC3Q9Y6N6 1575 aa16.73■□□□□ 0.27
CDK5RAP3-229ENST00000583697 THOC2Q8NI27 1593 aaKnown RBP16.67■□□□□ 0.26
CDK5RAP3-229ENST00000583697 KIF21AQ7Z4S6 1674 aa16.65■□□□□ 0.26
CDK5RAP3-229ENST00000583697 WIZO95785 1651 aa16.64■□□□□ 0.25
CDK5RAP3-229ENST00000583697 DNAJC5Q9H3Z4 198 aa16.62■□□□□ 0.25
CDK5RAP3-229ENST00000583697 PDS5BQ9NTI5 1447 aa16.57■□□□□ 0.24
CDK5RAP3-229ENST00000583697 CADPSQ9ULU8 1353 aa16.49■□□□□ 0.23
CDK5RAP3-229ENST00000583697 TOP2AP11388 1531 aaKnown RBP16.45■□□□□ 0.22
CDK5RAP3-229ENST00000583697 MRC2Q9UBG0 1479 aa16.45■□□□□ 0.22
CDK5RAP3-229ENST00000583697 WDR62O43379 1518 aa16.43■□□□□ 0.22
CDK5RAP3-229ENST00000583697 RSF1Q96T23 1441 aaPredicted RBP16.42■□□□□ 0.22
CDK5RAP3-229ENST00000583697 CEP164Q9UPV0 1460 aa16.42■□□□□ 0.22
CDK5RAP3-229ENST00000583697 FANCD2Q9BXW9 1451 aa16.36■□□□□ 0.21
CDK5RAP3-229ENST00000583697 PRDM2Q13029 1718 aa16.36■□□□□ 0.21
CDK5RAP3-229ENST00000583697 CFTRP13569 1480 aa16.34■□□□□ 0.21
CDK5RAP3-229ENST00000583697 URB2Q14146 1524 aaKnown RBP16.2■□□□□ 0.18
CDK5RAP3-229ENST00000583697 CCDC88BA6NC98 1476 aa16.17■□□□□ 0.18
CDK5RAP3-229ENST00000583697 TOPBP1Q92547 1522 aa16.05■□□□□ 0.16
CDK5RAP3-229ENST00000583697 IFT140Q96RY7 1462 aa16.05■□□□□ 0.16
CDK5RAP3-229ENST00000583697 ABCC8Q09428 1581 aa16.04■□□□□ 0.16
CDK5RAP3-229ENST00000583697 DNMBPQ6XZF7 1577 aa16.04■□□□□ 0.16
CDK5RAP3-229ENST00000583697 EIF4G3O43432 1585 aaKnown RBP16.01■□□□□ 0.15
CDK5RAP3-229ENST00000583697 ZNF608Q9ULD9 1512 aaPredicted RBP15.99■□□□□ 0.15
CDK5RAP3-229ENST00000583697 TRIM41Q8WV44 630 aa15.97■□□□□ 0.15
CDK5RAP3-229ENST00000583697 OSCARQ8IYS5 282 aa15.95■□□□□ 0.14
CDK5RAP3-229ENST00000583697 TARBP1Q13395 1621 aaKnown RBP15.93■□□□□ 0.14
CDK5RAP3-229ENST00000583697 POLA1P09884 1462 aaPredicted RBP15.9■□□□□ 0.14
CDK5RAP3-229ENST00000583697 CHD1O14646 1710 aa15.89■□□□□ 0.13
CDK5RAP3-229ENST00000583697 RIMBP3CA6NJZ7 1639 aa15.87■□□□□ 0.13
CDK5RAP3-229ENST00000583697 RIMBP3BA6NNM3 1639 aa15.87■□□□□ 0.13
CDK5RAP3-229ENST00000583697 RIMBP3Q9UFD9 1639 aa15.87■□□□□ 0.13
CDK5RAP3-229ENST00000583697 WDR97A6NE52 1622 aa15.84■□□□□ 0.13
CDK5RAP3-229ENST00000583697 AQRO60306 1485 aaKnown RBP eCLIP15.82■□□□□ 0.129e-9■■■■□ 25
CDK5RAP3-229ENST00000583697 FGD5Q6ZNL6 1462 aa15.81■□□□□ 0.12
CDK5RAP3-229ENST00000583697 ARHGEF11O15085 1522 aa15.8■□□□□ 0.12
CDK5RAP3-229ENST00000583697 RAD54L2Q9Y4B4 1467 aa15.79■□□□□ 0.12
CDK5RAP3-229ENST00000583697 CUX1P39880 1505 aa15.78■□□□□ 0.12
CDK5RAP3-229ENST00000583697 SOGA1O94964 1423 aa15.77■□□□□ 0.12
CDK5RAP3-229ENST00000583697 SNAPC4Q5SXM2 1469 aa15.74■□□□□ 0.11
CDK5RAP3-229ENST00000583697 PBRM1Q86U86 1689 aa15.73■□□□□ 0.11
CDK5RAP3-229ENST00000583697 TDRD9Q8NDG6 1382 aaKnown RBP15.72■□□□□ 0.11
CDK5RAP3-229ENST00000583697 FBLN2P98095 1184 aa15.71■□□□□ 0.11
CDK5RAP3-229ENST00000583697 MAGI1Q96QZ7 1491 aaPredicted RBP15.71■□□□□ 0.1
CDK5RAP3-229ENST00000583697 SUPT5HO00267 1087 aaKnown RBP15.7■□□□□ 0.1
CDK5RAP3-229ENST00000583697 SYNJ1O43426 1573 aa15.69■□□□□ 0.1
CDK5RAP3-229ENST00000583697 GRIN2BQ13224 1484 aa15.68■□□□□ 0.1
CDK5RAP3-229ENST00000583697 CLASP1Q7Z460 1538 aa15.66■□□□□ 0.1
CDK5RAP3-229ENST00000583697 ABCA5Q8WWZ7 1642 aa15.65■□□□□ 0.1
CDK5RAP3-229ENST00000583697 SYNJ2O15056 1496 aa15.64■□□□□ 0.09
CDK5RAP3-229ENST00000583697 ARAP1Q96P48 1450 aa15.63■□□□□ 0.09
CDK5RAP3-229ENST00000583697 BIVM-ERCC5R4GMW8 1640 aa15.62■□□□□ 0.09
CDK5RAP3-229ENST00000583697 GAPVD1Q14C86 1478 aa15.62■□□□□ 0.09
CDK5RAP3-229ENST00000583697 ABCA10Q8WWZ4 1543 aa15.62■□□□□ 0.09
CDK5RAP3-229ENST00000583697 CHMP7Q8WUX9 453 aaPredicted RBP15.6■□□□□ 0.09
CDK5RAP3-229ENST00000583697 TOP2BQ02880 1626 aa15.59■□□□□ 0.09
CDK5RAP3-229ENST00000583697 CYB5RLQ6IPT4 315 aa15.58■□□□□ 0.08
CDK5RAP3-229ENST00000583697 ADAMTS12P58397 1594 aa15.55■□□□□ 0.08
CDK5RAP3-229ENST00000583697 WRNQ14191 1432 aaPredicted RBP eCLIP15.55■□□□□ 0.08
CDK5RAP3-229ENST00000583697 GRIN2AQ12879 1464 aa15.5■□□□□ 0.07
CDK5RAP3-229ENST00000583697 ERICH3Q5RHP9 1530 aa15.46■□□□□ 0.07
CDK5RAP3-229ENST00000583697 CEP170Q5SW79 1584 aa15.45■□□□□ 0.06
CDK5RAP3-229ENST00000583697 TRHP20396 242 aaPredicted RBP15.44■□□□□ 0.06
CDK5RAP3-229ENST00000583697 FHAD1B1AJZ9 1412 aa15.43■□□□□ 0.06
CDK5RAP3-229ENST00000583697 NUP160Q12769 1436 aa15.41■□□□□ 0.06
CDK5RAP3-229ENST00000583697 SHROOM2Q13796 1616 aa15.39■□□□□ 0.05
CDK5RAP3-229ENST00000583697 ERCC6L2Q5T890 1561 aa15.37■□□□□ 0.05
CDK5RAP3-229ENST00000583697 RUSC2Q8N2Y8 1516 aa15.34■□□□□ 0.05
CDK5RAP3-229ENST00000583697 CUL7Q14999 1698 aa15.32■□□□□ 0.04
CDK5RAP3-229ENST00000583697 KIF27Q86VH2 1401 aa15.25■□□□□ 0.03
CDK5RAP3-229ENST00000583697 PRG4Q92954 1404 aaPredicted RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms