RNA–Protein interactions for RNA: ENST00000457800.3

DDX42-203, Transcript of DEAD-box helicase 42, humanhuman

TSL 5 BASIC

Gene DDX42, Length 3,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-203ENST00000457800 NISCHQ9Y2I1 1504 aa17.73■□□□□ 0.43
DDX42-203ENST00000457800 CCDC180Q9P1Z9 1646 aa16.33■□□□□ 0.2
DDX42-203ENST00000457800 ABCC9O60706 1549 aa15.64■□□□□ 0.09
DDX42-203ENST00000457800 MYO15BQ96JP2 1530 aa15.35■□□□□ 0.05
DDX42-203ENST00000457800 RB1CC1Q8TDY2 1594 aa15.35■□□□□ 0.05
DDX42-203ENST00000457800 NACADO15069 1562 aa15.32■□□□□ 0.04
DDX42-203ENST00000457800 DCAF1Q9Y4B6 1507 aa15.18■□□□□ 0.02
DDX42-203ENST00000457800 SHROOM4Q9ULL8 1493 aa15.13■□□□□ 0.01
DDX42-203ENST00000457800 UNC13AQ9UPW8 1703 aa14.96□□□□□ -0.01
DDX42-203ENST00000457800 ZCCHC6Q5VYS8 1495 aaKnown RBP14.91□□□□□ -0.02
DDX42-203ENST00000457800 BICRAQ9NZM4 1560 aa14.84□□□□□ -0.03
DDX42-203ENST00000457800 DNAJC5BQ9UF47 199 aa14.64□□□□□ -0.07
DDX42-203ENST00000457800 EIF4G1Q04637 1599 aaKnown RBP14.42□□□□□ -0.1
DDX42-203ENST00000457800 CC2D2AQ9P2K1 1620 aa14.42□□□□□ -0.1
DDX42-203ENST00000457800 CECR2Q9BXF3 1484 aa14.29□□□□□ -0.12
DDX42-203ENST00000457800 PABPN1Q86U42 306 aaKnown RBP eCLIP14.28□□□□□ -0.121e-6■■□□□ 14.2
DDX42-203ENST00000457800 SCRIBQ14160 1630 aa14.26□□□□□ -0.13
DDX42-203ENST00000457800 CUX2O14529 1486 aa14.05□□□□□ -0.16
DDX42-203ENST00000457800 HMGXB3Q12766 1538 aa14.05□□□□□ -0.16
DDX42-203ENST00000457800 NCAPD3P42695 1498 aa14.04□□□□□ -0.16
DDX42-203ENST00000457800 DCAF8L2P0C7V8 631 aa14.03□□□□□ -0.16
DDX42-203ENST00000457800 PEG3Q9GZU2 1588 aa14.01□□□□□ -0.17
DDX42-203ENST00000457800 SMARCA2P51531 1590 aa13.96□□□□□ -0.17
DDX42-203ENST00000457800 SMARCA4P51532 1647 aa13.88□□□□□ -0.19
DDX42-203ENST00000457800 ATAD2BQ9ULI0 1458 aa13.83□□□□□ -0.2
DDX42-203ENST00000457800 BAZ1AQ9NRL2 1556 aaPredicted RBP13.83□□□□□ -0.2
DDX42-203ENST00000457800 LAMC3Q9Y6N6 1575 aa13.8□□□□□ -0.2
DDX42-203ENST00000457800 DNAJC5Q9H3Z4 198 aa13.79□□□□□ -0.2
DDX42-203ENST00000457800 THOC2Q8NI27 1593 aaKnown RBP13.74□□□□□ -0.21
DDX42-203ENST00000457800 BAZ1BQ9UIG0 1483 aaKnown RBP13.63□□□□□ -0.23
DDX42-203ENST00000457800 ERCC6Q03468 1493 aa13.59□□□□□ -0.23
DDX42-203ENST00000457800 WDR62O43379 1518 aa13.55□□□□□ -0.24
DDX42-203ENST00000457800 PDS5BQ9NTI5 1447 aa13.54□□□□□ -0.24
DDX42-203ENST00000457800 PRDM2Q13029 1718 aa13.52□□□□□ -0.24
DDX42-203ENST00000457800 KIF21AQ7Z4S6 1674 aa13.51□□□□□ -0.25
DDX42-203ENST00000457800 MROH2BQ7Z745 1585 aa13.47□□□□□ -0.25
DDX42-203ENST00000457800 MRC2Q9UBG0 1479 aa13.46□□□□□ -0.25
DDX42-203ENST00000457800 TOP2AP11388 1531 aaKnown RBP13.44□□□□□ -0.26
DDX42-203ENST00000457800 CADPSQ9ULU8 1353 aa13.43□□□□□ -0.26
DDX42-203ENST00000457800 NESP48681 1621 aa13.41□□□□□ -0.26
DDX42-203ENST00000457800 RSF1Q96T23 1441 aaPredicted RBP13.37□□□□□ -0.27
DDX42-203ENST00000457800 CFTRP13569 1480 aa13.36□□□□□ -0.27
DDX42-203ENST00000457800 WDR97A6NE52 1622 aa13.31□□□□□ -0.28
DDX42-203ENST00000457800 CEP164Q9UPV0 1460 aa13.31□□□□□ -0.28
DDX42-203ENST00000457800 WIZO95785 1651 aa13.29□□□□□ -0.28
DDX42-203ENST00000457800 ABCC8Q09428 1581 aa13.25□□□□□ -0.29
DDX42-203ENST00000457800 FANCD2Q9BXW9 1451 aa13.23□□□□□ -0.29
DDX42-203ENST00000457800 IFT140Q96RY7 1462 aa13.17□□□□□ -0.3
DDX42-203ENST00000457800 URB2Q14146 1524 aaKnown RBP13.15□□□□□ -0.3
DDX42-203ENST00000457800 DNMBPQ6XZF7 1577 aa13.11□□□□□ -0.31
DDX42-203ENST00000457800 TARBP1Q13395 1621 aaKnown RBP13.05□□□□□ -0.32
DDX42-203ENST00000457800 TOPBP1Q92547 1522 aa13.02□□□□□ -0.32
DDX42-203ENST00000457800 RIMBP3CA6NJZ7 1639 aa13.01□□□□□ -0.33
DDX42-203ENST00000457800 RIMBP3BA6NNM3 1639 aa13.01□□□□□ -0.33
DDX42-203ENST00000457800 RIMBP3Q9UFD9 1639 aa13.01□□□□□ -0.33
DDX42-203ENST00000457800 BIVM-ERCC5R4GMW8 1640 aa13□□□□□ -0.33
DDX42-203ENST00000457800 EIF4G3O43432 1585 aaKnown RBP12.99□□□□□ -0.33
DDX42-203ENST00000457800 CCDC88BA6NC98 1476 aa12.99□□□□□ -0.33
DDX42-203ENST00000457800 OSCARQ8IYS5 282 aa12.96□□□□□ -0.34
DDX42-203ENST00000457800 CLASP1Q7Z460 1538 aa12.92□□□□□ -0.34
DDX42-203ENST00000457800 CHD1O14646 1710 aa12.91□□□□□ -0.34
DDX42-203ENST00000457800 ARHGEF11O15085 1522 aa12.9□□□□□ -0.34
DDX42-203ENST00000457800 MAGI1Q96QZ7 1491 aaPredicted RBP12.88□□□□□ -0.35
DDX42-203ENST00000457800 POLA1P09884 1462 aaPredicted RBP12.83□□□□□ -0.35
DDX42-203ENST00000457800 ZNF608Q9ULD9 1512 aaPredicted RBP12.83□□□□□ -0.36
DDX42-203ENST00000457800 SYNJ1O43426 1573 aa12.83□□□□□ -0.36
DDX42-203ENST00000457800 TOP2BQ02880 1626 aa12.83□□□□□ -0.36
DDX42-203ENST00000457800 ABCA5Q8WWZ7 1642 aa12.8□□□□□ -0.36
DDX42-203ENST00000457800 PBRM1Q86U86 1689 aa12.79□□□□□ -0.36
DDX42-203ENST00000457800 GRIN2BQ13224 1484 aa12.76□□□□□ -0.37
DDX42-203ENST00000457800 ARAP1Q96P48 1450 aa12.75□□□□□ -0.37
DDX42-203ENST00000457800 ABCA10Q8WWZ4 1543 aa12.75□□□□□ -0.37
DDX42-203ENST00000457800 SYNJ2O15056 1496 aa12.74□□□□□ -0.37
DDX42-203ENST00000457800 SHROOM2Q13796 1616 aa12.74□□□□□ -0.37
DDX42-203ENST00000457800 CUX1P39880 1505 aa12.72□□□□□ -0.37
DDX42-203ENST00000457800 FGD5Q6ZNL6 1462 aa12.7□□□□□ -0.38
DDX42-203ENST00000457800 SOGA1O94964 1423 aa12.69□□□□□ -0.38
DDX42-203ENST00000457800 SNAPC4Q5SXM2 1469 aa12.67□□□□□ -0.38
DDX42-203ENST00000457800 ERICH3Q5RHP9 1530 aa12.66□□□□□ -0.38
DDX42-203ENST00000457800 ADAMTS12P58397 1594 aa12.66□□□□□ -0.38
DDX42-203ENST00000457800 AQRO60306 1485 aaKnown RBP eCLIP12.64□□□□□ -0.398e-7■■■■□ 26.3
DDX42-203ENST00000457800 NUP160Q12769 1436 aa12.64□□□□□ -0.39
DDX42-203ENST00000457800 TRIM41Q8WV44 630 aa12.62□□□□□ -0.39
DDX42-203ENST00000457800 GAPVD1Q14C86 1478 aa12.6□□□□□ -0.39
DDX42-203ENST00000457800 EEA1Q15075 1411 aa12.59□□□□□ -0.39
DDX42-203ENST00000457800 RAD54L2Q9Y4B4 1467 aa12.59□□□□□ -0.39
DDX42-203ENST00000457800 GRIN2AQ12879 1464 aa12.56□□□□□ -0.4
DDX42-203ENST00000457800 FHAD1B1AJZ9 1412 aa12.54□□□□□ -0.4
DDX42-203ENST00000457800 CUL7Q14999 1698 aa12.54□□□□□ -0.4
DDX42-203ENST00000457800 KIF21BO75037 1637 aa12.54□□□□□ -0.4
DDX42-203ENST00000457800 CEP170Q5SW79 1584 aa12.52□□□□□ -0.41
DDX42-203ENST00000457800 WRNQ14191 1432 aaPredicted RBP eCLIP12.52□□□□□ -0.41
DDX42-203ENST00000457800 MAPKBP1O60336 1514 aa12.5□□□□□ -0.41
DDX42-203ENST00000457800 RUSC2Q8N2Y8 1516 aa12.47□□□□□ -0.41
DDX42-203ENST00000457800 TDRD9Q8NDG6 1382 aaKnown RBP12.47□□□□□ -0.41
DDX42-203ENST00000457800 KIF13AQ9H1H9 1805 aa12.45□□□□□ -0.42
DDX42-203ENST00000457800 CHMP7Q8WUX9 453 aaPredicted RBP12.4□□□□□ -0.42
DDX42-203ENST00000457800 GLI2P10070 1586 aa12.39□□□□□ -0.43
DDX42-203ENST00000457800 CYB5RLQ6IPT4 315 aa12.36□□□□□ -0.43
DDX42-203ENST00000457800 UHRF1BP1LA0JNW5 1464 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms