RNA–Protein interactions for RNA: ENST00000449085.3

BRD2-205, Transcript of bromodomain containing 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene BRD2, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD2-205ENST00000449085 NISCHQ9Y2I1 1504 aa25.36■■□□□ 1.65
BRD2-205ENST00000449085 SHROOM4Q9ULL8 1493 aa21.73■■□□□ 1.07
BRD2-205ENST00000449085 CCDC180Q9P1Z9 1646 aa21.54■■□□□ 1.04
BRD2-205ENST00000449085 ZCCHC6Q5VYS8 1495 aaKnown RBP21.4■■□□□ 1.02
BRD2-205ENST00000449085 DCAF8L2P0C7V8 631 aa21.36■■□□□ 1.01
BRD2-205ENST00000449085 SUPT5HO00267 1087 aaKnown RBP21.22■□□□□ 0.99
BRD2-205ENST00000449085 DCAF1Q9Y4B6 1507 aa20.7■□□□□ 0.9
BRD2-205ENST00000449085 CHIC1Q5VXU3 224 aa20.43■□□□□ 0.86
BRD2-205ENST00000449085 ABCC9O60706 1549 aa20.35■□□□□ 0.85
BRD2-205ENST00000449085 SCRIBQ14160 1630 aa20.35■□□□□ 0.85
BRD2-205ENST00000449085 MYO15BQ96JP2 1530 aa20.32■□□□□ 0.84
BRD2-205ENST00000449085 RSF1Q96T23 1441 aaPredicted RBP20.05■□□□□ 0.8
BRD2-205ENST00000449085 NACADO15069 1562 aa20■□□□□ 0.79
BRD2-205ENST00000449085 PELP1Q8IZL8 1130 aaKnown RBP19.94■□□□□ 0.78
BRD2-205ENST00000449085 LOC105371045A0A1W2PR82 267 aa19.92■□□□□ 0.78
BRD2-205ENST00000449085 CECR2Q9BXF3 1484 aa19.89■□□□□ 0.77
BRD2-205ENST00000449085 RB1CC1Q8TDY2 1594 aa19.83■□□□□ 0.77
BRD2-205ENST00000449085 MYT1Q01538 1121 aa19.78■□□□□ 0.76
BRD2-205ENST00000449085 MROH2BQ7Z745 1585 aa19.77■□□□□ 0.75
BRD2-205ENST00000449085 TRIM41Q8WV44 630 aa19.7■□□□□ 0.74
BRD2-205ENST00000449085 PCGF6Q9BYE7 350 aa19.7■□□□□ 0.74
BRD2-205ENST00000449085 FAM9AQ8IZU1 332 aaPredicted RBP19.66■□□□□ 0.74
BRD2-205ENST00000449085 WIZO95785 1651 aa19.65■□□□□ 0.74
BRD2-205ENST00000449085 EHMT2Q96KQ7 1210 aa19.59■□□□□ 0.73
BRD2-205ENST00000449085 PABPN1Q86U42 306 aaKnown RBP eCLIP19.5■□□□□ 0.714e-8■■□□□ 14.2
BRD2-205ENST00000449085 BAZ1AQ9NRL2 1556 aaPredicted RBP19.48■□□□□ 0.71
BRD2-205ENST00000449085 UNC13AQ9UPW8 1703 aa19.46■□□□□ 0.71
BRD2-205ENST00000449085 HRCP23327 699 aa19.46■□□□□ 0.7
BRD2-205ENST00000449085 SMARCA4P51532 1647 aa19.35■□□□□ 0.69
BRD2-205ENST00000449085 TTBK1Q5TCY1 1321 aaPredicted RBP19.28■□□□□ 0.68
BRD2-205ENST00000449085 TOP2AP11388 1531 aaKnown RBP19.26■□□□□ 0.67
BRD2-205ENST00000449085 TRIM26Q12899 539 aaPredicted RBP19.25■□□□□ 0.67
BRD2-205ENST00000449085 CCDC88BA6NC98 1476 aa19.25■□□□□ 0.67
BRD2-205ENST00000449085 BICRAQ9NZM4 1560 aa19.24■□□□□ 0.67
BRD2-205ENST00000449085 PPARGC1BQ86YN6 1023 aaKnown RBP19.24■□□□□ 0.67
BRD2-205ENST00000449085 EIF4G1Q04637 1599 aaKnown RBP19.2■□□□□ 0.66
BRD2-205ENST00000449085 ABCC8Q09428 1581 aa19.2■□□□□ 0.66
BRD2-205ENST00000449085 SMARCA2P51531 1590 aa19.18■□□□□ 0.66
BRD2-205ENST00000449085 SOGA1O94964 1423 aa18.98■□□□□ 0.63
BRD2-205ENST00000449085 ATAD2BQ9ULI0 1458 aa18.93■□□□□ 0.62
BRD2-205ENST00000449085 RUSC2Q8N2Y8 1516 aa18.91■□□□□ 0.62
BRD2-205ENST00000449085 PEG3Q9GZU2 1588 aa18.91■□□□□ 0.62
BRD2-205ENST00000449085 BAZ1BQ9UIG0 1483 aaKnown RBP18.88■□□□□ 0.61
BRD2-205ENST00000449085 WRNQ14191 1432 aaPredicted RBP eCLIP18.85■□□□□ 0.61
BRD2-205ENST00000449085 CSRNP3Q8WYN3 585 aa18.84■□□□□ 0.61
BRD2-205ENST00000449085 UBTFP17480 764 aaKnown RBP18.83■□□□□ 0.61
BRD2-205ENST00000449085 CEP162Q5TB80 1403 aa18.78■□□□□ 0.6
BRD2-205ENST00000449085 SYNJ1O43426 1573 aa18.75■□□□□ 0.59
BRD2-205ENST00000449085 TNIKQ9UKE5 1360 aa18.7■□□□□ 0.58
BRD2-205ENST00000449085 EEA1Q15075 1411 aa18.7■□□□□ 0.58
BRD2-205ENST00000449085 ZEB1P37275 1124 aaPredicted RBP18.66■□□□□ 0.58
BRD2-205ENST00000449085 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.65■□□□□ 0.58
BRD2-205ENST00000449085 RANGAP1P46060 587 aaPredicted RBP18.64■□□□□ 0.57
BRD2-205ENST00000449085 GOLGA3Q08378 1498 aa18.64■□□□□ 0.57
BRD2-205ENST00000449085 NCAPD3P42695 1498 aa18.55■□□□□ 0.56
BRD2-205ENST00000449085 CCER1Q8TC90 406 aaPredicted RBP18.55■□□□□ 0.56
BRD2-205ENST00000449085 CEP164Q9UPV0 1460 aa18.54■□□□□ 0.56
BRD2-205ENST00000449085 RAPGEF2Q9Y4G8 1499 aa18.51■□□□□ 0.55
BRD2-205ENST00000449085 HMGXB3Q12766 1538 aa18.49■□□□□ 0.55
BRD2-205ENST00000449085 TOP2BQ02880 1626 aa18.48■□□□□ 0.55
BRD2-205ENST00000449085 CLIP1P30622 1438 aa18.46■□□□□ 0.55
BRD2-205ENST00000449085 KIF21BO75037 1637 aa18.46■□□□□ 0.55
BRD2-205ENST00000449085 PRKCSHP14314 528 aaPredicted RBP18.46■□□□□ 0.55
BRD2-205ENST00000449085 APLP2Q06481 763 aa18.41■□□□□ 0.54
BRD2-205ENST00000449085 CUX1P39880 1505 aa18.4■□□□□ 0.54
BRD2-205ENST00000449085 BIVM-ERCC5R4GMW8 1640 aa18.38■□□□□ 0.53
BRD2-205ENST00000449085 CFTRP13569 1480 aa18.37■□□□□ 0.53
BRD2-205ENST00000449085 SLC24A1O60721 1099 aa18.37■□□□□ 0.53
BRD2-205ENST00000449085 HNRNPUL2Q1KMD3 747 aaKnown RBP18.34■□□□□ 0.53
BRD2-205ENST00000449085 VPS8Q8N3P4 1428 aa18.32■□□□□ 0.52
BRD2-205ENST00000449085 PRXQ9BXM0 1461 aa18.27■□□□□ 0.52
BRD2-205ENST00000449085 KIF27Q86VH2 1401 aa18.26■□□□□ 0.51
BRD2-205ENST00000449085 CC2D2AQ9P2K1 1620 aa18.24■□□□□ 0.51
BRD2-205ENST00000449085 CADPSQ9ULU8 1353 aa18.23■□□□□ 0.51
BRD2-205ENST00000449085 ERICH3Q5RHP9 1530 aa18.2■□□□□ 0.5
BRD2-205ENST00000449085 ERICH6Q7L0X2 663 aa18.18■□□□□ 0.5
BRD2-205ENST00000449085 CUX2O14529 1486 aa18.17■□□□□ 0.5
BRD2-205ENST00000449085 ARAP1Q96P48 1450 aa18.16■□□□□ 0.5
BRD2-205ENST00000449085 KANK4Q5T7N3 995 aaPredicted RBP18.15■□□□□ 0.5
BRD2-205ENST00000449085 FGD5Q6ZNL6 1462 aa18.12■□□□□ 0.49
BRD2-205ENST00000449085 IGF1RP08069 1367 aa18.11■□□□□ 0.49
BRD2-205ENST00000449085 PRDM2Q13029 1718 aa18.11■□□□□ 0.49
BRD2-205ENST00000449085 NESP48681 1621 aa18.08■□□□□ 0.48
BRD2-205ENST00000449085 FANCD2Q9BXW9 1451 aa18.07■□□□□ 0.48
BRD2-205ENST00000449085 ARHGAP35Q9NRY4 1499 aa18.05■□□□□ 0.48
BRD2-205ENST00000449085 DIEXFQ68CQ4 756 aaKnown RBP18.04■□□□□ 0.48
BRD2-205ENST00000449085 CARMIL1Q5VZK9 1371 aa18.04■□□□□ 0.48
BRD2-205ENST00000449085 DNAJC5BQ9UF47 199 aa18.02■□□□□ 0.48
BRD2-205ENST00000449085 RAD54L2Q9Y4B4 1467 aa18.01■□□□□ 0.47
BRD2-205ENST00000449085 P3H3Q8IVL6 736 aa18■□□□□ 0.47
BRD2-205ENST00000449085 ITGAEP38570 1179 aa17.97■□□□□ 0.47
BRD2-205ENST00000449085 ATP1B4Q9UN42 357 aaPredicted RBP17.94■□□□□ 0.46
BRD2-205ENST00000449085 POLA1P09884 1462 aaPredicted RBP17.92■□□□□ 0.46
BRD2-205ENST00000449085 TOPBP1Q92547 1522 aa17.92■□□□□ 0.46
BRD2-205ENST00000449085 ZNF316A6NFI3 1004 aaPredicted RBP17.91■□□□□ 0.46
BRD2-205ENST00000449085 DNMBPQ6XZF7 1577 aa17.89■□□□□ 0.46
BRD2-205ENST00000449085 SCAF1Q9H7N4 1312 aaKnown RBP17.85■□□□□ 0.45
BRD2-205ENST00000449085 CCNB3Q8WWL7 1395 aa17.84■□□□□ 0.45
BRD2-205ENST00000449085 ABCA10Q8WWZ4 1543 aa17.84■□□□□ 0.45
BRD2-205ENST00000449085 RRBP1Q9P2E9 1410 aaKnown RBP17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms