RNA–Protein interactions for RNA: ENST00000374825.8

BRD2-201, Transcript of bromodomain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene BRD2, Length 4,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD2-201ENST00000374825 NISCHQ9Y2I1 1504 aa27.5■■□□□ 1.99
BRD2-201ENST00000374825 DCAF8L2P0C7V8 631 aa27.49■■□□□ 1.99
BRD2-201ENST00000374825 SUPT5HO00267 1087 aaKnown RBP27.35■■□□□ 1.97
BRD2-201ENST00000374825 PELP1Q8IZL8 1130 aaKnown RBP26.87■■□□□ 1.89
BRD2-201ENST00000374825 SHROOM4Q9ULL8 1493 aa26.63■■□□□ 1.85
BRD2-201ENST00000374825 PCGF6Q9BYE7 350 aa26.56■■□□□ 1.84
BRD2-201ENST00000374825 MYT1Q01538 1121 aa26.49■■□□□ 1.83
BRD2-201ENST00000374825 ZEB1P37275 1124 aaPredicted RBP26.32■■□□□ 1.8
BRD2-201ENST00000374825 CENPBP07199 599 aaPredicted RBP26.23■■□□□ 1.79
BRD2-201ENST00000374825 EHMT2Q96KQ7 1210 aa25.99■■□□□ 1.75
BRD2-201ENST00000374825 HRCP23327 699 aa25.97■■□□□ 1.75
BRD2-201ENST00000374825 APLP2Q06481 763 aa25.68■■□□□ 1.7
BRD2-201ENST00000374825 CCER1Q8TC90 406 aaPredicted RBP25.66■■□□□ 1.7
BRD2-201ENST00000374825 FAM9AQ8IZU1 332 aaPredicted RBP25.65■■□□□ 1.7
BRD2-201ENST00000374825 TRIM26Q12899 539 aaPredicted RBP25.52■■□□□ 1.68
BRD2-201ENST00000374825 ERICH6Q7L0X2 663 aa25.51■■□□□ 1.67
BRD2-201ENST00000374825 TRIM41Q8WV44 630 aa25.37■■□□□ 1.65
BRD2-201ENST00000374825 TTBK1Q5TCY1 1321 aaPredicted RBP25.32■■□□□ 1.64
BRD2-201ENST00000374825 YTHDC1Q96MU7 727 aaKnown RBP25.24■■□□□ 1.63
BRD2-201ENST00000374825 PPARGC1BQ86YN6 1023 aaKnown RBP25.17■■□□□ 1.62
BRD2-201ENST00000374825 NEFLP07196 543 aa25.15■■□□□ 1.62
BRD2-201ENST00000374825 CHIC1Q5VXU3 224 aa25.06■■□□□ 1.6
BRD2-201ENST00000374825 LOC105371045A0A1W2PR82 267 aa24.86■■□□□ 1.57
BRD2-201ENST00000374825 UBTFP17480 764 aaKnown RBP24.8■■□□□ 1.56
BRD2-201ENST00000374825 DIEXFQ68CQ4 756 aaKnown RBP24.73■■□□□ 1.55
BRD2-201ENST00000374825 RANGAP1P46060 587 aaPredicted RBP24.61■■□□□ 1.53
BRD2-201ENST00000374825 GTF3C3Q9Y5Q9 886 aa24.6■■□□□ 1.53
BRD2-201ENST00000374825 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.47■■□□□ 1.51
BRD2-201ENST00000374825 ACIN1Q9UKV3 1341 aaKnown RBP24.44■■□□□ 1.5
BRD2-201ENST00000374825 HNRNPUL2Q1KMD3 747 aaKnown RBP24.27■■□□□ 1.48
BRD2-201ENST00000374825 ATP1B4Q9UN42 357 aaPredicted RBP24.25■■□□□ 1.47
BRD2-201ENST00000374825 DAXXQ9UER7 740 aaPredicted RBP24.17■■□□□ 1.46
BRD2-201ENST00000374825 RTL5Q5HYW3 569 aaPredicted RBP24.14■■□□□ 1.45
BRD2-201ENST00000374825 ZNF316A6NFI3 1004 aaPredicted RBP24.11■■□□□ 1.45
BRD2-201ENST00000374825 ITGAEP38570 1179 aa23.99■■□□□ 1.43
BRD2-201ENST00000374825 CLSPNQ9HAW4 1339 aa23.97■■□□□ 1.43
BRD2-201ENST00000374825 DCAF1Q9Y4B6 1507 aa23.96■■□□□ 1.43
BRD2-201ENST00000374825 SCAF1Q9H7N4 1312 aaKnown RBP23.95■■□□□ 1.42
BRD2-201ENST00000374825 BCANQ96GW7 911 aa23.89■■□□□ 1.41
BRD2-201ENST00000374825 CDK11AQ9UQ88 783 aaPredicted RBP23.86■■□□□ 1.41
BRD2-201ENST00000374825 NEUROD1Q13562 356 aa23.84■■□□□ 1.41
BRD2-201ENST00000374825 ANP32CO43423 234 aa23.68■■□□□ 1.38
BRD2-201ENST00000374825 POLR3GLQ9BT43 218 aa23.66■■□□□ 1.38
BRD2-201ENST00000374825 MYT1LQ9UL68 1186 aa23.59■■□□□ 1.37
BRD2-201ENST00000374825 CNGB1Q14028 1251 aaPredicted RBP23.48■■□□□ 1.35
BRD2-201ENST00000374825 FKBP8Q14318 412 aa23.44■■□□□ 1.34
BRD2-201ENST00000374825 ANP32AP39687 249 aaKnown RBP23.42■■□□□ 1.34
BRD2-201ENST00000374825 FAM50AQ14320 339 aaKnown RBP23.4■■□□□ 1.34
BRD2-201ENST00000374825 MIER1Q8N108 512 aa23.27■■□□□ 1.32
BRD2-201ENST00000374825 ANP32EQ9BTT0 268 aa23.27■■□□□ 1.32
BRD2-201ENST00000374825 CSRNP3Q8WYN3 585 aa23.26■■□□□ 1.31
BRD2-201ENST00000374825 MYO15BQ96JP2 1530 aa23.21■■□□□ 1.31
BRD2-201ENST00000374825 TRIM52Q96A61 297 aa23.17■■□□□ 1.3
BRD2-201ENST00000374825 CCDC180Q9P1Z9 1646 aa23.17■■□□□ 1.3
BRD2-201ENST00000374825 EIF5BO60841 1220 aaKnown RBP23.15■■□□□ 1.3
BRD2-201ENST00000374825 HNRNPUQ00839 825 aaKnown RBP eCLIP23.06■■□□□ 1.289e-6■□□□□ 8.1
BRD2-201ENST00000374825 DDX10Q13206 875 aaKnown RBP23.05■■□□□ 1.28
BRD2-201ENST00000374825 GLIPR1L2Q4G1C9 344 aa23.03■■□□□ 1.28
BRD2-201ENST00000374825 NPM2Q86SE8 214 aaKnown RBP23.02■■□□□ 1.28
BRD2-201ENST00000374825 ZBTB47Q9UFB7 747 aaPredicted RBP23.01■■□□□ 1.27
BRD2-201ENST00000374825 NBR1Q14596 966 aa22.96■■□□□ 1.27
BRD2-201ENST00000374825 ZCCHC6Q5VYS8 1495 aaKnown RBP22.94■■□□□ 1.26
BRD2-201ENST00000374825 TONSLQ96HA7 1378 aa22.88■■□□□ 1.25
BRD2-201ENST00000374825 CCDC136Q96JN2 1154 aa22.87■■□□□ 1.25
BRD2-201ENST00000374825 ZNF326Q5BKZ1 582 aaKnown RBP22.86■■□□□ 1.25
BRD2-201ENST00000374825 BCL11AQ9H165 835 aa22.85■■□□□ 1.25
BRD2-201ENST00000374825 SUPT16HQ9Y5B9 1047 aaKnown RBP22.81■■□□□ 1.24
BRD2-201ENST00000374825 FAM9BQ8IZU0 186 aa22.79■■□□□ 1.24
BRD2-201ENST00000374825 SLC4A1APQ9BWU0 796 aaKnown RBP22.79■■□□□ 1.24
BRD2-201ENST00000374825 CANXP27824 592 aaKnown RBP22.75■■□□□ 1.23
BRD2-201ENST00000374825 ANP32BQ92688 251 aaKnown RBP22.71■■□□□ 1.23
BRD2-201ENST00000374825 IRX6P78412 446 aaPredicted RBP22.67■■□□□ 1.22
BRD2-201ENST00000374825 UPF2Q9HAU5 1272 aaKnown RBP22.65■■□□□ 1.22
BRD2-201ENST00000374825 MRS2Q9HD23 443 aa22.65■■□□□ 1.22
BRD2-201ENST00000374825 TMC1Q8TDI8 760 aa22.57■■□□□ 1.2
BRD2-201ENST00000374825 DDRGK1Q96HY6 314 aa22.56■■□□□ 1.2
BRD2-201ENST00000374825 CEP162Q5TB80 1403 aa22.56■■□□□ 1.2
BRD2-201ENST00000374825 P3H3Q8IVL6 736 aa22.54■■□□□ 1.2
BRD2-201ENST00000374825 CLIP1P30622 1438 aa22.54■■□□□ 1.2
BRD2-201ENST00000374825 PPM1GO15355 546 aaPredicted RBP22.52■■□□□ 1.2
BRD2-201ENST00000374825 PPP4R2Q9NY27 417 aa22.52■■□□□ 1.2
BRD2-201ENST00000374825 EEA1Q15075 1411 aa22.52■■□□□ 1.2
BRD2-201ENST00000374825 RBM19Q9Y4C8 960 aaKnown RBP22.51■■□□□ 1.19
BRD2-201ENST00000374825 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.5■■□□□ 1.19
BRD2-201ENST00000374825 NOP58Q9Y2X3 529 aaKnown RBP22.49■■□□□ 1.19
BRD2-201ENST00000374825 HSP90AA1P07900 732 aaKnown RBP22.47■■□□□ 1.19
BRD2-201ENST00000374825 PABPN1Q86U42 306 aaKnown RBP eCLIP22.46■■□□□ 1.194e-8■■□□□ 14.2
BRD2-201ENST00000374825 HIRIP3Q9BW71 556 aaPredicted RBP22.46■■□□□ 1.19
BRD2-201ENST00000374825 EIF4G2P78344 907 aaKnown RBP eCLIP22.44■■□□□ 1.186e-12■■□□□ 12.7
BRD2-201ENST00000374825 TNIKQ9UKE5 1360 aa22.44■■□□□ 1.18
BRD2-201ENST00000374825 NEFMP07197 916 aa22.43■■□□□ 1.18
BRD2-201ENST00000374825 ERICH6BQ5W0A0 696 aa22.43■■□□□ 1.18
BRD2-201ENST00000374825 ABCC9O60706 1549 aa22.43■■□□□ 1.18
BRD2-201ENST00000374825 TSHZ2Q9NRE2 1034 aa22.42■■□□□ 1.18
BRD2-201ENST00000374825 DEKP35659 375 aaKnown RBP22.41■■□□□ 1.18
BRD2-201ENST00000374825 SALL2Q9Y467 1007 aaPredicted RBP22.4■■□□□ 1.18
BRD2-201ENST00000374825 GOLGA3Q08378 1498 aa22.4■■□□□ 1.18
BRD2-201ENST00000374825 RSF1Q96T23 1441 aaPredicted RBP22.35■■□□□ 1.17
BRD2-201ENST00000374825 BECN1Q14457 450 aa22.34■■□□□ 1.17
BRD2-201ENST00000374825 SCRIBQ14160 1630 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms