Protein–RNA interactions for Protein: O15371

EIF3D, Eukaryotic translation initiation factor 3 subunit D, humanhuman

Known RBP eCLIP

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3DO15371 MYL6-217ENST00000550639 419 ntTSL 510.38□□□□□ -0.753e-6■■■■□ 21.9
EIF3DO15371 MYL6-214ENST00000549392 411 ntTSL 510.29□□□□□ -0.763e-6■■■■□ 21.9
EIF3DO15371 MYL6B-203ENST00000548571 223 ntTSL 49.4□□□□□ -0.93e-6■■■■□ 21.9
EIF3DO15371 HEATR5A-209ENST00000552500 489 ntTSL 39.17□□□□□ -0.943e-6■■■■□ 21.9
EIF3DO15371 MYL6-207ENST00000547649 655 ntAPPRIS ALT1 TSL 1 (best) BASIC9.13□□□□□ -0.953e-6■■■■□ 21.9
EIF3DO15371 MYL6-201ENST00000293422 664 ntAPPRIS ALT1 TSL 2 BASIC9.13□□□□□ -0.953e-6■■■■□ 21.9
EIF3DO15371 MMADHC-202ENST00000422782 1462 ntTSL 5 BASIC8.87□□□□□ -0.993e-6■■■■□ 21.9
EIF3DO15371 MYL6-211ENST00000548580 528 ntTSL 2 BASIC8.15□□□□□ -1.13e-6■■■■□ 21.9
EIF3DO15371 MMADHC-204ENST00000460311 324 ntTSL 27.25□□□□□ -1.253e-6■■■■□ 21.9
EIF3DO15371 HEATR5A-206ENST00000550366 2687 ntTSL 26.95□□□□□ -1.33e-6■■■■□ 21.9
EIF3DO15371 MYL6-221ENST00000552297 454 ntTSL 36.65□□□□□ -1.343e-6■■■■□ 21.9
EIF3DO15371 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.09□□□□□ -1.433e-6■■■■□ 21.9
EIF3DO15371 HEATR5A-202ENST00000538864 5237 ntTSL 55.62□□□□□ -1.513e-6■■■■□ 21.9
EIF3DO15371 CALM1-210ENST00000555132 554 ntTSL 417.93■□□□□ 0.462e-10■■■■□ 21.9
EIF3DO15371 UBR4-211ENST00000467272 891 ntTSL 512.91□□□□□ -0.344e-9■■■■□ 21.6
EIF3DO15371 NEK6-209ENST00000444973 790 ntTSL 530.2■■■□□ 2.433e-6■■■■□ 21.5
EIF3DO15371 NEK6-211ENST00000454453 732 ntTSL 326.97■■□□□ 1.913e-6■■■■□ 21.5
EIF3DO15371 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.443e-6■■■■□ 21.5
EIF3DO15371 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.313e-6■■■■□ 21.5
EIF3DO15371 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.043e-6■■■■□ 21.5
EIF3DO15371 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC14.14□□□□□ -0.153e-6■■■■□ 21.5
EIF3DO15371 NEK6-202ENST00000373596 758 ntTSL 313.93□□□□□ -0.183e-6■■■■□ 21.5
EIF3DO15371 NEK6-213ENST00000540326 2578 ntTSL 1 (best) BASIC13.5□□□□□ -0.253e-6■■■■□ 21.5
EIF3DO15371 NEK6-208ENST00000425237 806 ntTSL 312.64□□□□□ -0.393e-6■■■■□ 21.5
EIF3DO15371 NEK6-203ENST00000373600 3619 ntTSL 1 (best) BASIC12.63□□□□□ -0.393e-6■■■■□ 21.5
EIF3DO15371 AL669831.3-208ENST00000634337 891 ntTSL 5 BASIC12.1□□□□□ -0.473e-6■■■■□ 21.5
EIF3DO15371 NEK6-201ENST00000320246 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.473e-6■■■■□ 21.5
EIF3DO15371 NEK6-204ENST00000373603 3447 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.833e-6■■■■□ 21.5
EIF3DO15371 TBC1D8B-201ENST00000276175 3538 ntAPPRIS ALT1 TSL 5 BASIC9.82□□□□□ -0.843e-6■■■■□ 21.5
EIF3DO15371 CHD8-210ENST00000555962 1232 ntTSL 59.8□□□□□ -0.843e-6■■■■□ 21.5
EIF3DO15371 AL669831.3-207ENST00000635509 941 ntTSL 59.77□□□□□ -0.853e-6■■■■□ 21.5
EIF3DO15371 TBC1D8B-206ENST00000481617 4098 ntTSL 1 (best) BASIC9.69□□□□□ -0.863e-6■■■■□ 21.5
EIF3DO15371 F5-202ENST00000367797 7024 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.913e-6■■■■□ 21.5
EIF3DO15371 F5-201ENST00000367796 7039 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.913e-6■■■■□ 21.5
EIF3DO15371 CHD8-209ENST00000555935 2617 ntTSL 58.31□□□□□ -1.083e-6■■■■□ 21.5
EIF3DO15371 UBR5-205ENST00000519365 602 ntTSL 36.37□□□□□ -1.393e-6■■■■□ 21.5
EIF3DO15371 UBR5-208ENST00000520898 582 ntTSL 35.35□□□□□ -1.553e-6■■■■□ 21.5
EIF3DO15371 CHD8-207ENST00000554384 735 ntTSL 34.95□□□□□ -1.623e-6■■■■□ 21.5
EIF3DO15371 RTEL1-TNFRSF6B-204ENST00000496281 5314 ntTSL 219.03■□□□□ 0.644e-7■■■■□ 21.5
EIF3DO15371 KMT2B-202ENST00000585476 2864 ntTSL 1 (best)16.14■□□□□ 0.174e-7■■■■□ 21.4
EIF3DO15371 SPATA5-202ENST00000422835 2492 ntTSL 1 (best)10.04□□□□□ -0.82e-6■■■■□ 21.4
EIF3DO15371 DOCK1-206ENST00000623213 5761 ntTSL 1 (best) BASIC9.7□□□□□ -0.868e-8■■■■□ 21.4
EIF3DO15371 DOCK1-201ENST00000280333 6797 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.928e-8■■■■□ 21.4
EIF3DO15371 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.482e-6■■■■□ 21.4
EIF3DO15371 AC138969.2-201ENST00000532739 9932 ntBASIC15.84■□□□□ 0.133e-8■■■■□ 21.4
EIF3DO15371 RNF213-201ENST00000319921 5316 ntTSL 1 (best) BASIC13□□□□□ -0.332e-7■■■■□ 21.3
EIF3DO15371 RNF213-207ENST00000559070 4644 ntTSL 1 (best)11.95□□□□□ -0.52e-7■■■■□ 21.3
EIF3DO15371 ANP32A-208ENST00000495420 707 ntTSL 218.24■□□□□ 0.511e-7■■■■□ 21.3
EIF3DO15371 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.351e-7■■■■□ 21.3
EIF3DO15371 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.121e-7■■■■□ 21.3
EIF3DO15371 ANP32A-202ENST00000409628 2001 ntTSL 514.78□□□□□ -0.041e-7■■■■□ 21.3
EIF3DO15371 PKD1P5-203ENST00000542593 761 ntTSL 518.23■□□□□ 0.513e-7■■■■□ 21.1
EIF3DO15371 PKD1P5-201ENST00000532415 10291 ntBASIC16.91■□□□□ 0.33e-7■■■■□ 21.1
EIF3DO15371 MCM4-210ENST00000520934 621 ntTSL 326.03■■□□□ 1.766e-6■■■■□ 21
EIF3DO15371 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC25.94■■□□□ 1.746e-6■■■■□ 21
EIF3DO15371 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.646e-6■■■■□ 21
EIF3DO15371 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.526e-6■■■■□ 21
EIF3DO15371 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.496e-6■■■■□ 21
EIF3DO15371 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.46e-6■■■■□ 21
EIF3DO15371 MCM4-211ENST00000520994 522 ntTSL 322.62■■□□□ 1.216e-6■■■■□ 21
EIF3DO15371 PKD1-221ENST00000488185 737 ntTSL 522.19■■□□□ 1.146e-6■■■■□ 21
EIF3DO15371 FLCN-205ENST00000417064 757 ntTSL 222.11■■□□□ 1.136e-6■■■■□ 21
EIF3DO15371 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.93■■□□□ 1.16e-6■■■■□ 21
EIF3DO15371 PKD1-237ENST00000569983 722 ntTSL 521.82■■□□□ 1.086e-6■■■■□ 21
EIF3DO15371 ASF1B-203ENST00000589468 587 ntTSL 321.76■■□□□ 1.076e-6■■■■□ 21
EIF3DO15371 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 16e-6■■■■□ 21
EIF3DO15371 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 16e-6■■■■□ 21
EIF3DO15371 AKT1-215ENST00000555926 553 ntTSL 320.94■□□□□ 0.946e-6■■■■□ 21
EIF3DO15371 PRKCA-203ENST00000578063 1733 ntTSL 1 (best)20.52■□□□□ 0.886e-6■■■■□ 21
EIF3DO15371 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.97■□□□□ 0.796e-6■■■■□ 21
EIF3DO15371 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.772e-7■■■■□ 21
EIF3DO15371 PKD1-235ENST00000568591 2545 ntTSL 219.82■□□□□ 0.766e-6■■■■□ 21
EIF3DO15371 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.766e-6■■■■□ 21
EIF3DO15371 PKD1-204ENST00000468674 490 ntTSL 519.08■□□□□ 0.646e-6■■■■□ 21
EIF3DO15371 PIEZO1-214ENST00000521877 686 ntTSL 218.87■□□□□ 0.616e-6■■■■□ 21
EIF3DO15371 PKD1-214ENST00000483024 465 ntTSL 518.28■□□□□ 0.526e-6■■■■□ 21
EIF3DO15371 FLCN-204ENST00000389171 2523 ntTSL 217.99■□□□□ 0.476e-6■■■■□ 21
EIF3DO15371 ASF1B-204ENST00000590835 746 ntTSL 517.62■□□□□ 0.416e-6■■■■□ 21
EIF3DO15371 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.386e-6■■■■□ 21
EIF3DO15371 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.336e-6■■■■□ 21
EIF3DO15371 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC15.96■□□□□ 0.156e-6■■■■□ 21
EIF3DO15371 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.066e-6■■■■□ 21
EIF3DO15371 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.056e-6■■■■□ 21
EIF3DO15371 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.046e-6■■■■□ 21
EIF3DO15371 CIC-204ENST00000572681 8218 ntTSL 5 BASIC13.79□□□□□ -0.26e-6■■■■□ 21
EIF3DO15371 MCM4-215ENST00000523944 4105 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.236e-6■■■■□ 21
EIF3DO15371 MCM4-216ENST00000524086 547 ntTSL 513.53□□□□□ -0.246e-6■■■■□ 21
EIF3DO15371 UHRF1-206ENST00000622802 3230 ntTSL 1 (best) BASIC13.51□□□□□ -0.256e-6■■■■□ 21
EIF3DO15371 TGFBRAP1-203ENST00000595531 5595 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.266e-6■■■■□ 21
EIF3DO15371 ACACA-234ENST00000614482 2177 ntTSL 213.42□□□□□ -0.266e-6■■■■□ 21
EIF3DO15371 FLCN-201ENST00000285071 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.296e-6■■■■□ 21
EIF3DO15371 AKT1-208ENST00000554581 3916 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.336e-6■■■■□ 21
EIF3DO15371 AKT1-212ENST00000555380 534 ntTSL 412.71□□□□□ -0.376e-6■■■■□ 21
EIF3DO15371 MCM4-207ENST00000519170 734 ntTSL 312.43□□□□□ -0.426e-6■■■■□ 21
EIF3DO15371 MCM4-203ENST00000518221 572 ntTSL 412.17□□□□□ -0.466e-6■■■■□ 21
EIF3DO15371 AKT1-202ENST00000402615 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.476e-6■■■■□ 21
EIF3DO15371 POLQ-203ENST00000488282 839 ntTSL 311.5□□□□□ -0.576e-6■■■■□ 21
EIF3DO15371 RNF213-217ENST00000573919 899 ntTSL 39.98□□□□□ -0.816e-6■■■■□ 21
EIF3DO15371 ACACA-245ENST00000619546 5315 ntTSL 1 (best)9.91□□□□□ -0.826e-6■■■■□ 21
EIF3DO15371 SCN9A-203ENST00000409672 9768 ntAPPRIS P2 TSL 5 BASIC8.63□□□□□ -1.036e-6■■■■□ 21
Retrieved 100 of 4,069 protein–RNA pairs in 279.6 ms