RNA–Protein interactions for RNA: ENST00000425237.5

NEK6-208, Transcript of NIMA related kinase 6, humanhuman

TSL 3

Gene NEK6, Length 806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-208ENST00000425237 NISCHQ9Y2I1 1504 aa27.27■■□□□ 1.96
NEK6-208ENST00000425237 CCDC180Q9P1Z9 1646 aa24.04■■□□□ 1.44
NEK6-208ENST00000425237 ABCC9O60706 1549 aa23.23■■□□□ 1.31
NEK6-208ENST00000425237 ZCCHC6Q5VYS8 1495 aaKnown RBP22.79■■□□□ 1.24
NEK6-208ENST00000425237 DCAF8L2P0C7V8 631 aa22.64■■□□□ 1.21
NEK6-208ENST00000425237 DCAF1Q9Y4B6 1507 aa22.62■■□□□ 1.21
NEK6-208ENST00000425237 MYO15BQ96JP2 1530 aa22.61■■□□□ 1.21
NEK6-208ENST00000425237 NACADO15069 1562 aa22.59■■□□□ 1.21
NEK6-208ENST00000425237 RB1CC1Q8TDY2 1594 aa22.5■■□□□ 1.19
NEK6-208ENST00000425237 SCRIBQ14160 1630 aa21.95■■□□□ 1.1
NEK6-208ENST00000425237 UNC13AQ9UPW8 1703 aa21.87■■□□□ 1.09
NEK6-208ENST00000425237 BICRAQ9NZM4 1560 aa21.8■■□□□ 1.08
NEK6-208ENST00000425237 PABPN1Q86U42 306 aaKnown RBP eCLIP21.8■■□□□ 1.08
NEK6-208ENST00000425237 SHROOM4Q9ULL8 1493 aa21.7■■□□□ 1.06
NEK6-208ENST00000425237 DNAJC5BQ9UF47 199 aa21.21■□□□□ 0.99
NEK6-208ENST00000425237 EIF4G1Q04637 1599 aaKnown RBP21.2■□□□□ 0.98
NEK6-208ENST00000425237 CECR2Q9BXF3 1484 aa21.19■□□□□ 0.98
NEK6-208ENST00000425237 BAZ1AQ9NRL2 1556 aaPredicted RBP21.1■□□□□ 0.97
NEK6-208ENST00000425237 SMARCA4P51532 1647 aa21.04■□□□□ 0.96
NEK6-208ENST00000425237 CC2D2AQ9P2K1 1620 aa21.01■□□□□ 0.95
NEK6-208ENST00000425237 MROH2BQ7Z745 1585 aa21■□□□□ 0.95
NEK6-208ENST00000425237 RSF1Q96T23 1441 aaPredicted RBP20.92■□□□□ 0.94
NEK6-208ENST00000425237 ATAD2BQ9ULI0 1458 aa20.9■□□□□ 0.94
NEK6-208ENST00000425237 SMARCA2P51531 1590 aa20.89■□□□□ 0.93
NEK6-208ENST00000425237 PEG3Q9GZU2 1588 aa20.88■□□□□ 0.93
NEK6-208ENST00000425237 NCAPD3P42695 1498 aa20.87■□□□□ 0.93
NEK6-208ENST00000425237 HMGXB3Q12766 1538 aa20.75■□□□□ 0.91
NEK6-208ENST00000425237 WIZO95785 1651 aa20.74■□□□□ 0.91
NEK6-208ENST00000425237 BAZ1BQ9UIG0 1483 aaKnown RBP20.73■□□□□ 0.91
NEK6-208ENST00000425237 SUPT5HO00267 1087 aaKnown RBP20.61■□□□□ 0.89
NEK6-208ENST00000425237 TOP2AP11388 1531 aaKnown RBP20.59■□□□□ 0.89
NEK6-208ENST00000425237 CCDC88BA6NC98 1476 aa20.37■□□□□ 0.85
NEK6-208ENST00000425237 CADPSQ9ULU8 1353 aa20.28■□□□□ 0.84
NEK6-208ENST00000425237 CFTRP13569 1480 aa20.22■□□□□ 0.83
NEK6-208ENST00000425237 LAMC3Q9Y6N6 1575 aa20.21■□□□□ 0.83
NEK6-208ENST00000425237 NESP48681 1621 aa20.2■□□□□ 0.82
NEK6-208ENST00000425237 PDS5BQ9NTI5 1447 aa20.12■□□□□ 0.81
NEK6-208ENST00000425237 ERCC6Q03468 1493 aa20.04■□□□□ 0.8
NEK6-208ENST00000425237 FANCD2Q9BXW9 1451 aa20.01■□□□□ 0.79
NEK6-208ENST00000425237 CEP164Q9UPV0 1460 aa19.95■□□□□ 0.78
NEK6-208ENST00000425237 PRDM2Q13029 1718 aa19.94■□□□□ 0.78
NEK6-208ENST00000425237 KIF21AQ7Z4S6 1674 aa19.89■□□□□ 0.77
NEK6-208ENST00000425237 CUX2O14529 1486 aa19.86■□□□□ 0.77
NEK6-208ENST00000425237 MRC2Q9UBG0 1479 aa19.86■□□□□ 0.77
NEK6-208ENST00000425237 THOC2Q8NI27 1593 aaKnown RBP19.79■□□□□ 0.76
NEK6-208ENST00000425237 ABCC8Q09428 1581 aa19.78■□□□□ 0.76
NEK6-208ENST00000425237 URB2Q14146 1524 aaKnown RBP19.77■□□□□ 0.76
NEK6-208ENST00000425237 DNAJC5Q9H3Z4 198 aa19.77■□□□□ 0.76
NEK6-208ENST00000425237 WDR62O43379 1518 aa19.76■□□□□ 0.75
NEK6-208ENST00000425237 TOPBP1Q92547 1522 aa19.71■□□□□ 0.75
NEK6-208ENST00000425237 DNMBPQ6XZF7 1577 aa19.71■□□□□ 0.75
NEK6-208ENST00000425237 WRNQ14191 1432 aaPredicted RBP eCLIP19.71■□□□□ 0.75
NEK6-208ENST00000425237 CUX1P39880 1505 aa19.68■□□□□ 0.74
NEK6-208ENST00000425237 TOP2BQ02880 1626 aa19.59■□□□□ 0.73
NEK6-208ENST00000425237 SYNJ1O43426 1573 aa19.58■□□□□ 0.73
NEK6-208ENST00000425237 POLA1P09884 1462 aaPredicted RBP19.58■□□□□ 0.72
NEK6-208ENST00000425237 BIVM-ERCC5R4GMW8 1640 aa19.57■□□□□ 0.72
NEK6-208ENST00000425237 FGD5Q6ZNL6 1462 aa19.56■□□□□ 0.72
NEK6-208ENST00000425237 IFT140Q96RY7 1462 aa19.54■□□□□ 0.72
NEK6-208ENST00000425237 SOGA1O94964 1423 aa19.53■□□□□ 0.72
NEK6-208ENST00000425237 TRIM41Q8WV44 630 aa19.48■□□□□ 0.71
NEK6-208ENST00000425237 RAD54L2Q9Y4B4 1467 aa19.48■□□□□ 0.71
NEK6-208ENST00000425237 CHIC1Q5VXU3 224 aa19.47■□□□□ 0.71
NEK6-208ENST00000425237 TARBP1Q13395 1621 aaKnown RBP19.45■□□□□ 0.7
NEK6-208ENST00000425237 ABCA10Q8WWZ4 1543 aa19.42■□□□□ 0.7
NEK6-208ENST00000425237 ZNF608Q9ULD9 1512 aaPredicted RBP19.39■□□□□ 0.69
NEK6-208ENST00000425237 TDRD9Q8NDG6 1382 aaKnown RBP19.36■□□□□ 0.69
NEK6-208ENST00000425237 WDR97A6NE52 1622 aa19.36■□□□□ 0.69
NEK6-208ENST00000425237 AQRO60306 1485 aaKnown RBP eCLIP19.33■□□□□ 0.682e-7■□□□□ 10.1
NEK6-208ENST00000425237 GAPVD1Q14C86 1478 aa19.29■□□□□ 0.68
NEK6-208ENST00000425237 KIF27Q86VH2 1401 aa19.29■□□□□ 0.68
NEK6-208ENST00000425237 EIF4G3O43432 1585 aaKnown RBP19.28■□□□□ 0.68
NEK6-208ENST00000425237 ABCA5Q8WWZ7 1642 aa19.26■□□□□ 0.67
NEK6-208ENST00000425237 GRIN2BQ13224 1484 aa19.26■□□□□ 0.67
NEK6-208ENST00000425237 ERICH3Q5RHP9 1530 aa19.19■□□□□ 0.66
NEK6-208ENST00000425237 IGF1RP08069 1367 aa19.19■□□□□ 0.66
NEK6-208ENST00000425237 EEA1Q15075 1411 aa19.17■□□□□ 0.66
NEK6-208ENST00000425237 MAGI1Q96QZ7 1491 aaPredicted RBP19.16■□□□□ 0.66
NEK6-208ENST00000425237 RUSC2Q8N2Y8 1516 aa19.16■□□□□ 0.66
NEK6-208ENST00000425237 SNAPC4Q5SXM2 1469 aa19.16■□□□□ 0.66
NEK6-208ENST00000425237 PBRM1Q86U86 1689 aa19.13■□□□□ 0.65
NEK6-208ENST00000425237 FHAD1B1AJZ9 1412 aa19.11■□□□□ 0.65
NEK6-208ENST00000425237 CSRNP3Q8WYN3 585 aa19.09■□□□□ 0.65
NEK6-208ENST00000425237 SYNJ2O15056 1496 aa19.09■□□□□ 0.65
NEK6-208ENST00000425237 CHMP7Q8WUX9 453 aaPredicted RBP19.07■□□□□ 0.64
NEK6-208ENST00000425237 CARMIL1Q5VZK9 1371 aa19.06■□□□□ 0.64
NEK6-208ENST00000425237 ADAMTS12P58397 1594 aa19.06■□□□□ 0.64
NEK6-208ENST00000425237 FBLN2P98095 1184 aa19.04■□□□□ 0.64
NEK6-208ENST00000425237 CUL7Q14999 1698 aa19.04■□□□□ 0.64
NEK6-208ENST00000425237 OSCARQ8IYS5 282 aa19.02■□□□□ 0.64
NEK6-208ENST00000425237 FAM9AQ8IZU1 332 aaPredicted RBP19.02■□□□□ 0.64
NEK6-208ENST00000425237 PRXQ9BXM0 1461 aa19■□□□□ 0.63
NEK6-208ENST00000425237 GRIN2AQ12879 1464 aa18.99■□□□□ 0.63
NEK6-208ENST00000425237 RAPGEF2Q9Y4G8 1499 aa18.97■□□□□ 0.63
NEK6-208ENST00000425237 CHD1O14646 1710 aa18.93■□□□□ 0.62
NEK6-208ENST00000425237 NUP160Q12769 1436 aa18.91■□□□□ 0.62
NEK6-208ENST00000425237 KIF21BO75037 1637 aa18.86■□□□□ 0.61
NEK6-208ENST00000425237 CEP170Q5SW79 1584 aa18.85■□□□□ 0.61
NEK6-208ENST00000425237 KIAA0586Q9BVV6 1533 aa18.83■□□□□ 0.6
NEK6-208ENST00000425237 CLASP1Q7Z460 1538 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms