RNA–Protein interactions for RNA: ENST00000518221.5

MCM4-203, Transcript of minichromosome maintenance complex component 4, humanhuman

TSL 4

Gene MCM4, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4-203ENST00000518221 NISCHQ9Y2I1 1504 aa26.14■■□□□ 1.77
MCM4-203ENST00000518221 ABCC9O60706 1549 aa23.42■■□□□ 1.34
MCM4-203ENST00000518221 CCDC180Q9P1Z9 1646 aa23.29■■□□□ 1.32
MCM4-203ENST00000518221 RB1CC1Q8TDY2 1594 aa22.23■■□□□ 1.15
MCM4-203ENST00000518221 DNAJC5BQ9UF47 199 aa22.18■■□□□ 1.14
MCM4-203ENST00000518221 NACADO15069 1562 aa22.05■■□□□ 1.12
MCM4-203ENST00000518221 ZCCHC6Q5VYS8 1495 aaKnown RBP21.86■■□□□ 1.09
MCM4-203ENST00000518221 DCAF8L2P0C7V8 631 aa21.82■■□□□ 1.08
MCM4-203ENST00000518221 UNC13AQ9UPW8 1703 aa21.77■■□□□ 1.08
MCM4-203ENST00000518221 PABPN1Q86U42 306 aaKnown RBP eCLIP21.77■■□□□ 1.08
MCM4-203ENST00000518221 MYO15BQ96JP2 1530 aa21.72■■□□□ 1.07
MCM4-203ENST00000518221 BICRAQ9NZM4 1560 aa21.64■■□□□ 1.05
MCM4-203ENST00000518221 DCAF1Q9Y4B6 1507 aa21.64■■□□□ 1.05
MCM4-203ENST00000518221 SHROOM4Q9ULL8 1493 aa21.3■■□□□ 1
MCM4-203ENST00000518221 SCRIBQ14160 1630 aa21.18■□□□□ 0.98
MCM4-203ENST00000518221 CC2D2AQ9P2K1 1620 aa21.17■□□□□ 0.98
MCM4-203ENST00000518221 CECR2Q9BXF3 1484 aa21.13■□□□□ 0.97
MCM4-203ENST00000518221 EIF4G1Q04637 1599 aaKnown RBP21.09■□□□□ 0.97
MCM4-203ENST00000518221 DNAJC5Q9H3Z4 198 aa20.48■□□□□ 0.87
MCM4-203ENST00000518221 NCAPD3P42695 1498 aa20.38■□□□□ 0.85
MCM4-203ENST00000518221 BAZ1AQ9NRL2 1556 aaPredicted RBP20.29■□□□□ 0.84
MCM4-203ENST00000518221 CUX2O14529 1486 aa20.28■□□□□ 0.84
MCM4-203ENST00000518221 ATAD2BQ9ULI0 1458 aa20.27■□□□□ 0.84
MCM4-203ENST00000518221 SMARCA4P51532 1647 aa20.27■□□□□ 0.83
MCM4-203ENST00000518221 ERCC6Q03468 1493 aa20.2■□□□□ 0.82
MCM4-203ENST00000518221 HMGXB3Q12766 1538 aa20.19■□□□□ 0.82
MCM4-203ENST00000518221 SMARCA2P51531 1590 aa20.19■□□□□ 0.82
MCM4-203ENST00000518221 MROH2BQ7Z745 1585 aa20.14■□□□□ 0.81
MCM4-203ENST00000518221 NESP48681 1621 aa20.08■□□□□ 0.8
MCM4-203ENST00000518221 PEG3Q9GZU2 1588 aa20.04■□□□□ 0.8
MCM4-203ENST00000518221 BAZ1BQ9UIG0 1483 aaKnown RBP20.04■□□□□ 0.8
MCM4-203ENST00000518221 WIZO95785 1651 aa20.02■□□□□ 0.8
MCM4-203ENST00000518221 RSF1Q96T23 1441 aaPredicted RBP20.02■□□□□ 0.79
MCM4-203ENST00000518221 LAMC3Q9Y6N6 1575 aa19.94■□□□□ 0.78
MCM4-203ENST00000518221 THOC2Q8NI27 1593 aaKnown RBP19.93■□□□□ 0.78
MCM4-203ENST00000518221 SUPT5HO00267 1087 aaKnown RBP19.84■□□□□ 0.77
MCM4-203ENST00000518221 KIF21AQ7Z4S6 1674 aa19.84■□□□□ 0.77
MCM4-203ENST00000518221 TOP2AP11388 1531 aaKnown RBP19.81■□□□□ 0.76
MCM4-203ENST00000518221 PDS5BQ9NTI5 1447 aa19.8■□□□□ 0.76
MCM4-203ENST00000518221 CADPSQ9ULU8 1353 aa19.72■□□□□ 0.75
MCM4-203ENST00000518221 MRC2Q9UBG0 1479 aa19.64■□□□□ 0.73
MCM4-203ENST00000518221 WDR62O43379 1518 aa19.61■□□□□ 0.73
MCM4-203ENST00000518221 AEBP2Q6ZN18 517 aaPredicted RBP19.61■□□□□ 0.73
MCM4-203ENST00000518221 CEP164Q9UPV0 1460 aa19.52■□□□□ 0.72
MCM4-203ENST00000518221 CCDC88BA6NC98 1476 aa19.51■□□□□ 0.71
MCM4-203ENST00000518221 FANCD2Q9BXW9 1451 aa19.48■□□□□ 0.71
MCM4-203ENST00000518221 CFTRP13569 1480 aa19.48■□□□□ 0.71
MCM4-203ENST00000518221 TRIM41Q8WV44 630 aa19.44■□□□□ 0.7
MCM4-203ENST00000518221 PRDM2Q13029 1718 aa19.42■□□□□ 0.7
MCM4-203ENST00000518221 URB2Q14146 1524 aaKnown RBP19.35■□□□□ 0.69
MCM4-203ENST00000518221 OSCARQ8IYS5 282 aa19.31■□□□□ 0.68
MCM4-203ENST00000518221 IFT140Q96RY7 1462 aa19.15■□□□□ 0.66
MCM4-203ENST00000518221 ZNF608Q9ULD9 1512 aaPredicted RBP19.14■□□□□ 0.65
MCM4-203ENST00000518221 TOPBP1Q92547 1522 aa19.1■□□□□ 0.65
MCM4-203ENST00000518221 RIMBP3CA6NJZ7 1639 aa19.09■□□□□ 0.65
MCM4-203ENST00000518221 RIMBP3BA6NNM3 1639 aa19.09■□□□□ 0.65
MCM4-203ENST00000518221 RIMBP3Q9UFD9 1639 aa19.09■□□□□ 0.65
MCM4-203ENST00000518221 ABCC8Q09428 1581 aa19.06■□□□□ 0.64
MCM4-203ENST00000518221 DNMBPQ6XZF7 1577 aa19.02■□□□□ 0.64
MCM4-203ENST00000518221 EIF4G3O43432 1585 aaKnown RBP19.02■□□□□ 0.63
MCM4-203ENST00000518221 ARHGEF11O15085 1522 aa19■□□□□ 0.63
MCM4-203ENST00000518221 CHIC1Q5VXU3 224 aa19■□□□□ 0.63
MCM4-203ENST00000518221 TARBP1Q13395 1621 aaKnown RBP18.98■□□□□ 0.63
MCM4-203ENST00000518221 AQRO60306 1485 aaKnown RBP eCLIP18.94■□□□□ 0.624e-11■■■■■ 47.1
MCM4-203ENST00000518221 WRNQ14191 1432 aaPredicted RBP eCLIP18.91■□□□□ 0.62
MCM4-203ENST00000518221 CHD1O14646 1710 aa18.91■□□□□ 0.62
MCM4-203ENST00000518221 POLA1P09884 1462 aaPredicted RBP18.9■□□□□ 0.62
MCM4-203ENST00000518221 BIVM-ERCC5R4GMW8 1640 aa18.9■□□□□ 0.62
MCM4-203ENST00000518221 CUX1P39880 1505 aa18.89■□□□□ 0.61
MCM4-203ENST00000518221 SYNJ1O43426 1573 aa18.88■□□□□ 0.61
MCM4-203ENST00000518221 TOP2BQ02880 1626 aa18.87■□□□□ 0.61
MCM4-203ENST00000518221 CYB5RLQ6IPT4 315 aa18.86■□□□□ 0.61
MCM4-203ENST00000518221 RAD54L2Q9Y4B4 1467 aa18.83■□□□□ 0.6
MCM4-203ENST00000518221 ARAP1Q96P48 1450 aa18.81■□□□□ 0.6
MCM4-203ENST00000518221 SOGA1O94964 1423 aa18.81■□□□□ 0.6
MCM4-203ENST00000518221 FBLN2P98095 1184 aa18.8■□□□□ 0.6
MCM4-203ENST00000518221 FGD5Q6ZNL6 1462 aa18.79■□□□□ 0.6
MCM4-203ENST00000518221 TDRD9Q8NDG6 1382 aaKnown RBP18.79■□□□□ 0.6
MCM4-203ENST00000518221 WDR97A6NE52 1622 aa18.77■□□□□ 0.6
MCM4-203ENST00000518221 SNAPC4Q5SXM2 1469 aa18.72■□□□□ 0.59
MCM4-203ENST00000518221 CLASP1Q7Z460 1538 aa18.71■□□□□ 0.59
MCM4-203ENST00000518221 MAGI1Q96QZ7 1491 aaPredicted RBP18.69■□□□□ 0.58
MCM4-203ENST00000518221 TRHP20396 242 aaPredicted RBP18.68■□□□□ 0.58
MCM4-203ENST00000518221 GRIN2BQ13224 1484 aa18.66■□□□□ 0.58
MCM4-203ENST00000518221 CHMP7Q8WUX9 453 aaPredicted RBP18.66■□□□□ 0.58
MCM4-203ENST00000518221 SYNJ2O15056 1496 aa18.63■□□□□ 0.57
MCM4-203ENST00000518221 ABCA10Q8WWZ4 1543 aa18.6■□□□□ 0.57
MCM4-203ENST00000518221 PBRM1Q86U86 1689 aa18.59■□□□□ 0.57
MCM4-203ENST00000518221 GAPVD1Q14C86 1478 aa18.58■□□□□ 0.56
MCM4-203ENST00000518221 ABCA5Q8WWZ7 1642 aa18.55■□□□□ 0.56
MCM4-203ENST00000518221 KIF27Q86VH2 1401 aa18.5■□□□□ 0.55
MCM4-203ENST00000518221 GRIN2AQ12879 1464 aa18.43■□□□□ 0.54
MCM4-203ENST00000518221 ERICH3Q5RHP9 1530 aa18.42■□□□□ 0.54
MCM4-203ENST00000518221 CUL7Q14999 1698 aa18.41■□□□□ 0.54
MCM4-203ENST00000518221 EEA1Q15075 1411 aa18.4■□□□□ 0.54
MCM4-203ENST00000518221 ERCC6L2Q5T890 1561 aa18.4■□□□□ 0.54
MCM4-203ENST00000518221 RUSC2Q8N2Y8 1516 aa18.39■□□□□ 0.54
MCM4-203ENST00000518221 ADAMTS12P58397 1594 aa18.39■□□□□ 0.53
MCM4-203ENST00000518221 NUP160Q12769 1436 aa18.39■□□□□ 0.53
MCM4-203ENST00000518221 CEP170Q5SW79 1584 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms