RNA–Protein interactions for RNA: ENST00000496281.1

RTEL1-TNFRSF6B-204, Transcript of RTEL1-TNFRSF6B readthrough (NMD candidate), humanhuman

TSL 2

Gene RTEL1-TNFRSF6B, Length 5,314 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTEL1-TNFRSF6B-204ENST00000496281 DCAF8L2P0C7V8 631 aa31.11■■■□□ 2.57
RTEL1-TNFRSF6B-204ENST00000496281 NISCHQ9Y2I1 1504 aa29.98■■■□□ 2.39
RTEL1-TNFRSF6B-204ENST00000496281 SUPT5HO00267 1087 aaKnown RBP29.82■■■□□ 2.36
RTEL1-TNFRSF6B-204ENST00000496281 SHROOM4Q9ULL8 1493 aa29.23■■■□□ 2.27
RTEL1-TNFRSF6B-204ENST00000496281 EHMT2Q96KQ7 1210 aa28.78■■■□□ 2.2
RTEL1-TNFRSF6B-204ENST00000496281 PELP1Q8IZL8 1130 aaKnown RBP28.58■■■□□ 2.17
RTEL1-TNFRSF6B-204ENST00000496281 PCGF6Q9BYE7 350 aa28.2■■■□□ 2.1
RTEL1-TNFRSF6B-204ENST00000496281 ZEB1P37275 1124 aaPredicted RBP28.15■■■□□ 2.1
RTEL1-TNFRSF6B-204ENST00000496281 FAM9AQ8IZU1 332 aaPredicted RBP28.11■■■□□ 2.09
RTEL1-TNFRSF6B-204ENST00000496281 APLP2Q06481 763 aa28.11■■■□□ 2.09
RTEL1-TNFRSF6B-204ENST00000496281 MYT1Q01538 1121 aa28.03■■■□□ 2.08
RTEL1-TNFRSF6B-204ENST00000496281 CENPBP07199 599 aaPredicted RBP27.92■■■□□ 2.06
RTEL1-TNFRSF6B-204ENST00000496281 TTBK1Q5TCY1 1321 aaPredicted RBP27.83■■■□□ 2.04
RTEL1-TNFRSF6B-204ENST00000496281 TRIM41Q8WV44 630 aa27.56■■■□□ 2
RTEL1-TNFRSF6B-204ENST00000496281 HRCP23327 699 aa27.55■■■□□ 2
RTEL1-TNFRSF6B-204ENST00000496281 RANGAP1P46060 587 aaPredicted RBP27.45■■□□□ 1.98
RTEL1-TNFRSF6B-204ENST00000496281 CCER1Q8TC90 406 aaPredicted RBP27.38■■□□□ 1.97
RTEL1-TNFRSF6B-204ENST00000496281 TRIM26Q12899 539 aaPredicted RBP27.26■■□□□ 1.95
RTEL1-TNFRSF6B-204ENST00000496281 UBTFP17480 764 aaKnown RBP27.19■■□□□ 1.94
RTEL1-TNFRSF6B-204ENST00000496281 ERICH6Q7L0X2 663 aa27.15■■□□□ 1.94
RTEL1-TNFRSF6B-204ENST00000496281 ATP1B4Q9UN42 357 aaPredicted RBP27.11■■□□□ 1.93
RTEL1-TNFRSF6B-204ENST00000496281 PPARGC1BQ86YN6 1023 aaKnown RBP26.91■■□□□ 1.9
RTEL1-TNFRSF6B-204ENST00000496281 NEFLP07196 543 aa26.84■■□□□ 1.89
RTEL1-TNFRSF6B-204ENST00000496281 CHIC1Q5VXU3 224 aa26.8■■□□□ 1.88
RTEL1-TNFRSF6B-204ENST00000496281 YTHDC1Q96MU7 727 aaKnown RBP26.79■■□□□ 1.88
RTEL1-TNFRSF6B-204ENST00000496281 LOC105371045A0A1W2PR82 267 aa26.59■■□□□ 1.85
RTEL1-TNFRSF6B-204ENST00000496281 ITGAEP38570 1179 aa26.36■■□□□ 1.81
RTEL1-TNFRSF6B-204ENST00000496281 DIEXFQ68CQ4 756 aaKnown RBP26.3■■□□□ 1.8
RTEL1-TNFRSF6B-204ENST00000496281 HNRNPUL2Q1KMD3 747 aaKnown RBP26.27■■□□□ 1.8
RTEL1-TNFRSF6B-204ENST00000496281 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.11■■□□□ 1.77
RTEL1-TNFRSF6B-204ENST00000496281 POLR3GLQ9BT43 218 aa26.05■■□□□ 1.76
RTEL1-TNFRSF6B-204ENST00000496281 GTF3C3Q9Y5Q9 886 aa26.02■■□□□ 1.76
RTEL1-TNFRSF6B-204ENST00000496281 MYT1LQ9UL68 1186 aa25.9■■□□□ 1.74
RTEL1-TNFRSF6B-204ENST00000496281 ACIN1Q9UKV3 1341 aaKnown RBP25.9■■□□□ 1.74
RTEL1-TNFRSF6B-204ENST00000496281 CNGB1Q14028 1251 aaPredicted RBP25.88■■□□□ 1.73
RTEL1-TNFRSF6B-204ENST00000496281 DAXXQ9UER7 740 aaPredicted RBP25.8■■□□□ 1.72
RTEL1-TNFRSF6B-204ENST00000496281 DCAF1Q9Y4B6 1507 aa25.73■■□□□ 1.71
RTEL1-TNFRSF6B-204ENST00000496281 ZNF316A6NFI3 1004 aaPredicted RBP25.72■■□□□ 1.71
RTEL1-TNFRSF6B-204ENST00000496281 RTL5Q5HYW3 569 aaPredicted RBP25.67■■□□□ 1.7
RTEL1-TNFRSF6B-204ENST00000496281 FAM50AQ14320 339 aaKnown RBP25.65■■□□□ 1.7
RTEL1-TNFRSF6B-204ENST00000496281 CLSPNQ9HAW4 1339 aa25.63■■□□□ 1.69
RTEL1-TNFRSF6B-204ENST00000496281 PABPN1Q86U42 306 aaKnown RBP eCLIP25.61■■□□□ 1.692e-7■■■■■ 28.3
RTEL1-TNFRSF6B-204ENST00000496281 ABCC9O60706 1549 aa25.55■■□□□ 1.68
RTEL1-TNFRSF6B-204ENST00000496281 NEUROD1Q13562 356 aa25.48■■□□□ 1.67
RTEL1-TNFRSF6B-204ENST00000496281 TRIM52Q96A61 297 aa25.46■■□□□ 1.67
RTEL1-TNFRSF6B-204ENST00000496281 SLC4A1APQ9BWU0 796 aaKnown RBP25.42■■□□□ 1.66
RTEL1-TNFRSF6B-204ENST00000496281 CDK11AQ9UQ88 783 aaPredicted RBP25.41■■□□□ 1.66
RTEL1-TNFRSF6B-204ENST00000496281 ANP32CO43423 234 aa25.35■■□□□ 1.65
RTEL1-TNFRSF6B-204ENST00000496281 BCANQ96GW7 911 aa25.31■■□□□ 1.64
RTEL1-TNFRSF6B-204ENST00000496281 SCAF1Q9H7N4 1312 aaKnown RBP25.25■■□□□ 1.63
RTEL1-TNFRSF6B-204ENST00000496281 CSRNP3Q8WYN3 585 aa25.2■■□□□ 1.62
RTEL1-TNFRSF6B-204ENST00000496281 ZNF326Q5BKZ1 582 aaKnown RBP25.2■■□□□ 1.62
RTEL1-TNFRSF6B-204ENST00000496281 P3H3Q8IVL6 736 aa25.07■■□□□ 1.6
RTEL1-TNFRSF6B-204ENST00000496281 FBLN2P98095 1184 aa25.03■■□□□ 1.6
RTEL1-TNFRSF6B-204ENST00000496281 ZCCHC6Q5VYS8 1495 aaKnown RBP25.03■■□□□ 1.6
RTEL1-TNFRSF6B-204ENST00000496281 ANP32AP39687 249 aaKnown RBP24.96■■□□□ 1.59
RTEL1-TNFRSF6B-204ENST00000496281 ARID3CA6NKF2 412 aa24.94■■□□□ 1.58
RTEL1-TNFRSF6B-204ENST00000496281 CCDC180Q9P1Z9 1646 aa24.92■■□□□ 1.58
RTEL1-TNFRSF6B-204ENST00000496281 FKBP8Q14318 412 aa24.9■■□□□ 1.58
RTEL1-TNFRSF6B-204ENST00000496281 MYO15BQ96JP2 1530 aa24.83■■□□□ 1.57
RTEL1-TNFRSF6B-204ENST00000496281 ZNF777Q9ULD5 760 aaPredicted RBP24.76■■□□□ 1.55
RTEL1-TNFRSF6B-204ENST00000496281 MIER1Q8N108 512 aa24.71■■□□□ 1.55
RTEL1-TNFRSF6B-204ENST00000496281 ZBTB47Q9UFB7 747 aaPredicted RBP24.7■■□□□ 1.54
RTEL1-TNFRSF6B-204ENST00000496281 CANXP27824 592 aaKnown RBP24.69■■□□□ 1.54
RTEL1-TNFRSF6B-204ENST00000496281 SCRIBQ14160 1630 aa24.67■■□□□ 1.54
RTEL1-TNFRSF6B-204ENST00000496281 TONSLQ96HA7 1378 aa24.63■■□□□ 1.53
RTEL1-TNFRSF6B-204ENST00000496281 BCL11AQ9H165 835 aa24.6■■□□□ 1.53
RTEL1-TNFRSF6B-204ENST00000496281 DDX10Q13206 875 aaKnown RBP24.6■■□□□ 1.53
RTEL1-TNFRSF6B-204ENST00000496281 HNRNPUQ00839 825 aaKnown RBP eCLIP24.59■■□□□ 1.53
RTEL1-TNFRSF6B-204ENST00000496281 ANP32EQ9BTT0 268 aa24.58■■□□□ 1.53
RTEL1-TNFRSF6B-204ENST00000496281 NEFMP07197 916 aa24.55■■□□□ 1.52
RTEL1-TNFRSF6B-204ENST00000496281 SLC24A1O60721 1099 aa24.5■■□□□ 1.51
RTEL1-TNFRSF6B-204ENST00000496281 NPM2Q86SE8 214 aaKnown RBP24.46■■□□□ 1.51
RTEL1-TNFRSF6B-204ENST00000496281 FAM9BQ8IZU0 186 aa24.45■■□□□ 1.51
RTEL1-TNFRSF6B-204ENST00000496281 EEA1Q15075 1411 aa24.43■■□□□ 1.5
RTEL1-TNFRSF6B-204ENST00000496281 CHIC2Q9UKJ5 165 aa24.42■■□□□ 1.5
RTEL1-TNFRSF6B-204ENST00000496281 GLIPR1L2Q4G1C9 344 aa24.41■■□□□ 1.5
RTEL1-TNFRSF6B-204ENST00000496281 EIF5BO60841 1220 aaKnown RBP24.39■■□□□ 1.5
RTEL1-TNFRSF6B-204ENST00000496281 CCDC136Q96JN2 1154 aa24.37■■□□□ 1.49
RTEL1-TNFRSF6B-204ENST00000496281 CHGAP10645 457 aaKnown RBP24.33■■□□□ 1.49
RTEL1-TNFRSF6B-204ENST00000496281 SALL2Q9Y467 1007 aaPredicted RBP24.33■■□□□ 1.49
RTEL1-TNFRSF6B-204ENST00000496281 CLIP1P30622 1438 aa24.32■■□□□ 1.48
RTEL1-TNFRSF6B-204ENST00000496281 CEP162Q5TB80 1403 aa24.31■■□□□ 1.48
RTEL1-TNFRSF6B-204ENST00000496281 NBR1Q14596 966 aa24.29■■□□□ 1.48
RTEL1-TNFRSF6B-204ENST00000496281 TMC1Q8TDI8 760 aa24.28■■□□□ 1.48
RTEL1-TNFRSF6B-204ENST00000496281 GOLGA3Q08378 1498 aa24.25■■□□□ 1.47
RTEL1-TNFRSF6B-204ENST00000496281 ANP32BQ92688 251 aaKnown RBP24.25■■□□□ 1.47
RTEL1-TNFRSF6B-204ENST00000496281 UPF2Q9HAU5 1272 aaKnown RBP24.24■■□□□ 1.47
RTEL1-TNFRSF6B-204ENST00000496281 MTUS2Q5JR59 1369 aa24.23■■□□□ 1.47
RTEL1-TNFRSF6B-204ENST00000496281 HIRIP3Q9BW71 556 aaPredicted RBP24.23■■□□□ 1.47
RTEL1-TNFRSF6B-204ENST00000496281 MRS2Q9HD23 443 aa24.22■■□□□ 1.47
RTEL1-TNFRSF6B-204ENST00000496281 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.22■■□□□ 1.472e-6■■□□□ 13.3
RTEL1-TNFRSF6B-204ENST00000496281 TNIKQ9UKE5 1360 aa24.22■■□□□ 1.47
RTEL1-TNFRSF6B-204ENST00000496281 RSF1Q96T23 1441 aaPredicted RBP24.21■■□□□ 1.47
RTEL1-TNFRSF6B-204ENST00000496281 SUPT16HQ9Y5B9 1047 aaKnown RBP24.2■■□□□ 1.46
RTEL1-TNFRSF6B-204ENST00000496281 TSPY4P0CV99 314 aa24.18■■□□□ 1.46
RTEL1-TNFRSF6B-204ENST00000496281 TSPY10P0CW01 314 aa24.18■■□□□ 1.46
RTEL1-TNFRSF6B-204ENST00000496281 ESF1Q9H501 851 aaKnown RBP24.17■■□□□ 1.46
RTEL1-TNFRSF6B-204ENST00000496281 STAG3Q9UJ98 1225 aa24.17■■□□□ 1.46
RTEL1-TNFRSF6B-204ENST00000496281 KDM2AQ9Y2K7 1162 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 8438.4 ms