RNA–Protein interactions for RNA: ENST00000373603.5

NEK6-204, Transcript of NIMA related kinase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK6, Length 3,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-204ENST00000373603 NISCHQ9Y2I1 1504 aa18.12■□□□□ 0.49
NEK6-204ENST00000373603 SHROOM4Q9ULL8 1493 aa16.17■□□□□ 0.18
NEK6-204ENST00000373603 SUPT5HO00267 1087 aaKnown RBP15.99■□□□□ 0.15
NEK6-204ENST00000373603 PELP1Q8IZL8 1130 aaKnown RBP15.66■□□□□ 0.1
NEK6-204ENST00000373603 DCAF8L2P0C7V8 631 aa15.6■□□□□ 0.09
NEK6-204ENST00000373603 CHIC1Q5VXU3 224 aa15.44■□□□□ 0.06
NEK6-204ENST00000373603 PCGF6Q9BYE7 350 aa15.42■□□□□ 0.06
NEK6-204ENST00000373603 MYO15BQ96JP2 1530 aa15.42■□□□□ 0.06
NEK6-204ENST00000373603 HRCP23327 699 aa15.39■□□□□ 0.05
NEK6-204ENST00000373603 MYT1Q01538 1121 aa15.37■□□□□ 0.05
NEK6-204ENST00000373603 ZCCHC6Q5VYS8 1495 aaKnown RBP15.32■□□□□ 0.04
NEK6-204ENST00000373603 PPARGC1BQ86YN6 1023 aaKnown RBP15.29■□□□□ 0.04
NEK6-204ENST00000373603 LOC105371045A0A1W2PR82 267 aa15.2■□□□□ 0.02
NEK6-204ENST00000373603 CCDC180Q9P1Z9 1646 aa15.02□□□□□ -0.01
NEK6-204ENST00000373603 EHMT2Q96KQ7 1210 aa14.91□□□□□ -0.02
NEK6-204ENST00000373603 FAM9AQ8IZU1 332 aaPredicted RBP14.85□□□□□ -0.03
NEK6-204ENST00000373603 TRIM26Q12899 539 aaPredicted RBP14.84□□□□□ -0.03
NEK6-204ENST00000373603 DCAF1Q9Y4B6 1507 aa14.83□□□□□ -0.04
NEK6-204ENST00000373603 TRIM41Q8WV44 630 aa14.72□□□□□ -0.05
NEK6-204ENST00000373603 TTBK1Q5TCY1 1321 aaPredicted RBP14.65□□□□□ -0.06
NEK6-204ENST00000373603 PRKCSHP14314 528 aaPredicted RBP14.59□□□□□ -0.07
NEK6-204ENST00000373603 RSF1Q96T23 1441 aaPredicted RBP14.55□□□□□ -0.08
NEK6-204ENST00000373603 ZEB1P37275 1124 aaPredicted RBP14.52□□□□□ -0.09
NEK6-204ENST00000373603 SCRIBQ14160 1630 aa14.52□□□□□ -0.09
NEK6-204ENST00000373603 ABCC9O60706 1549 aa14.48□□□□□ -0.09
NEK6-204ENST00000373603 SCAF1Q9H7N4 1312 aaKnown RBP14.46□□□□□ -0.09
NEK6-204ENST00000373603 RB1CC1Q8TDY2 1594 aa14.43□□□□□ -0.1
NEK6-204ENST00000373603 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.42□□□□□ -0.1
NEK6-204ENST00000373603 CCER1Q8TC90 406 aaPredicted RBP14.34□□□□□ -0.11
NEK6-204ENST00000373603 BCL11AQ9H165 835 aa14.32□□□□□ -0.12
NEK6-204ENST00000373603 CECR2Q9BXF3 1484 aa14.31□□□□□ -0.12
NEK6-204ENST00000373603 ERICH6Q7L0X2 663 aa14.27□□□□□ -0.13
NEK6-204ENST00000373603 MROH2BQ7Z745 1585 aa14.21□□□□□ -0.14
NEK6-204ENST00000373603 NEUROD1Q13562 356 aa14.19□□□□□ -0.14
NEK6-204ENST00000373603 DIEXFQ68CQ4 756 aaKnown RBP14.14□□□□□ -0.15
NEK6-204ENST00000373603 ACIN1Q9UKV3 1341 aaKnown RBP14.14□□□□□ -0.15
NEK6-204ENST00000373603 WIZO95785 1651 aa14.13□□□□□ -0.15
NEK6-204ENST00000373603 GTF3C3Q9Y5Q9 886 aa14.1□□□□□ -0.15
NEK6-204ENST00000373603 UBTFP17480 764 aaKnown RBP14.06□□□□□ -0.16
NEK6-204ENST00000373603 YTHDC1Q96MU7 727 aaKnown RBP14.05□□□□□ -0.16
NEK6-204ENST00000373603 ABCC8Q09428 1581 aa14.02□□□□□ -0.17
NEK6-204ENST00000373603 CENPBP07199 599 aaPredicted RBP14.01□□□□□ -0.17
NEK6-204ENST00000373603 CCDC88BA6NC98 1476 aa14□□□□□ -0.17
NEK6-204ENST00000373603 SLC24A1O60721 1099 aa13.99□□□□□ -0.17
NEK6-204ENST00000373603 APLP2Q06481 763 aa13.99□□□□□ -0.17
NEK6-204ENST00000373603 SOGA1O94964 1423 aa13.97□□□□□ -0.17
NEK6-204ENST00000373603 RANGAP1P46060 587 aaPredicted RBP13.97□□□□□ -0.17
NEK6-204ENST00000373603 HNRNPUL2Q1KMD3 747 aaKnown RBP13.97□□□□□ -0.17
NEK6-204ENST00000373603 CEP162Q5TB80 1403 aa13.96□□□□□ -0.17
NEK6-204ENST00000373603 NACADO15069 1562 aa13.95□□□□□ -0.18
NEK6-204ENST00000373603 CSRNP3Q8WYN3 585 aa13.91□□□□□ -0.18
NEK6-204ENST00000373603 RUSC2Q8N2Y8 1516 aa13.9□□□□□ -0.18
NEK6-204ENST00000373603 ZNF316A6NFI3 1004 aaPredicted RBP13.89□□□□□ -0.19
NEK6-204ENST00000373603 BAZ1AQ9NRL2 1556 aaPredicted RBP13.89□□□□□ -0.19
NEK6-204ENST00000373603 PABPN1Q86U42 306 aaKnown RBP eCLIP13.84□□□□□ -0.19
NEK6-204ENST00000373603 MIER1Q8N108 512 aa13.84□□□□□ -0.19
NEK6-204ENST00000373603 TNIKQ9UKE5 1360 aa13.83□□□□□ -0.2
NEK6-204ENST00000373603 WRNQ14191 1432 aaPredicted RBP eCLIP13.83□□□□□ -0.2
NEK6-204ENST00000373603 EIF4G1Q04637 1599 aaKnown RBP13.83□□□□□ -0.2
NEK6-204ENST00000373603 TOP2AP11388 1531 aaKnown RBP13.77□□□□□ -0.21
NEK6-204ENST00000373603 SMARCA2P51531 1590 aa13.75□□□□□ -0.21
NEK6-204ENST00000373603 SMARCA4P51532 1647 aa13.71□□□□□ -0.21
NEK6-204ENST00000373603 GOLGA3Q08378 1498 aa13.7□□□□□ -0.22
NEK6-204ENST00000373603 CLIP1P30622 1438 aa13.66□□□□□ -0.22
NEK6-204ENST00000373603 EEA1Q15075 1411 aa13.66□□□□□ -0.22
NEK6-204ENST00000373603 ITGAEP38570 1179 aa13.58□□□□□ -0.23
NEK6-204ENST00000373603 CEP164Q9UPV0 1460 aa13.58□□□□□ -0.24
NEK6-204ENST00000373603 RAPGEF2Q9Y4G8 1499 aa13.57□□□□□ -0.24
NEK6-204ENST00000373603 ANP32EQ9BTT0 268 aa13.55□□□□□ -0.24
NEK6-204ENST00000373603 VPS8Q8N3P4 1428 aa13.55□□□□□ -0.24
NEK6-204ENST00000373603 SYNJ1O43426 1573 aa13.55□□□□□ -0.24
NEK6-204ENST00000373603 KANK4Q5T7N3 995 aaPredicted RBP13.52□□□□□ -0.24
NEK6-204ENST00000373603 EIF5BO60841 1220 aaKnown RBP13.51□□□□□ -0.25
NEK6-204ENST00000373603 UNC13AQ9UPW8 1703 aa13.49□□□□□ -0.25
NEK6-204ENST00000373603 DHX57Q6P158 1386 aaKnown RBP13.45□□□□□ -0.26
NEK6-204ENST00000373603 KIF21BO75037 1637 aa13.45□□□□□ -0.26
NEK6-204ENST00000373603 SUPT16HQ9Y5B9 1047 aaKnown RBP13.44□□□□□ -0.26
NEK6-204ENST00000373603 KCNH8Q96L42 1107 aa13.44□□□□□ -0.26
NEK6-204ENST00000373603 BAZ1BQ9UIG0 1483 aaKnown RBP13.4□□□□□ -0.26
NEK6-204ENST00000373603 BCANQ96GW7 911 aa13.4□□□□□ -0.26
NEK6-204ENST00000373603 ATAD2BQ9ULI0 1458 aa13.38□□□□□ -0.27
NEK6-204ENST00000373603 BICRAQ9NZM4 1560 aa13.38□□□□□ -0.27
NEK6-204ENST00000373603 ANO8Q9HCE9 1232 aaPredicted RBP13.38□□□□□ -0.27
NEK6-204ENST00000373603 DAXXQ9UER7 740 aaPredicted RBP13.36□□□□□ -0.27
NEK6-204ENST00000373603 ATP1B4Q9UN42 357 aaPredicted RBP13.34□□□□□ -0.27
NEK6-204ENST00000373603 HIRIP3Q9BW71 556 aaPredicted RBP13.33□□□□□ -0.27
NEK6-204ENST00000373603 ARAP1Q96P48 1450 aa13.32□□□□□ -0.28
NEK6-204ENST00000373603 CLSPNQ9HAW4 1339 aa13.32□□□□□ -0.28
NEK6-204ENST00000373603 DDX10Q13206 875 aaKnown RBP13.3□□□□□ -0.28
NEK6-204ENST00000373603 PLEKHG5O94827 1062 aa13.29□□□□□ -0.28
NEK6-204ENST00000373603 SIN3AQ96ST3 1273 aa13.29□□□□□ -0.28
NEK6-204ENST00000373603 FAM50AQ14320 339 aaKnown RBP13.28□□□□□ -0.28
NEK6-204ENST00000373603 P3H3Q8IVL6 736 aa13.28□□□□□ -0.28
NEK6-204ENST00000373603 TSHZ2Q9NRE2 1034 aa13.28□□□□□ -0.28
NEK6-204ENST00000373603 CCNB3Q8WWL7 1395 aa13.28□□□□□ -0.28
NEK6-204ENST00000373603 PEG3Q9GZU2 1588 aa13.27□□□□□ -0.28
NEK6-204ENST00000373603 PRXQ9BXM0 1461 aa13.25□□□□□ -0.29
NEK6-204ENST00000373603 TOP2BQ02880 1626 aa13.25□□□□□ -0.29
NEK6-204ENST00000373603 RAB3GAP2Q9H2M9 1393 aa13.24□□□□□ -0.29
NEK6-204ENST00000373603 FKBP8Q14318 412 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms