RNA–Protein interactions for RNA: ENST00000280527.6

CRIM1-201, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRIM1, Length 5,912 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-201ENST00000280527 DCAF8L2P0C7V8 631 aa38.45■■■■□ 3.75
CRIM1-201ENST00000280527 SUPT5HO00267 1087 aaKnown RBP36.47■■■■□ 3.43
CRIM1-201ENST00000280527 PELP1Q8IZL8 1130 aaKnown RBP36.45■■■■□ 3.43
CRIM1-201ENST00000280527 EHMT2Q96KQ7 1210 aa35.98■■■■□ 3.35
CRIM1-201ENST00000280527 SHROOM4Q9ULL8 1493 aa35.44■■■■□ 3.26
CRIM1-201ENST00000280527 ERICH6Q7L0X2 663 aa35.3■■■■□ 3.24
CRIM1-201ENST00000280527 PCGF6Q9BYE7 350 aa35.06■■■■□ 3.2
CRIM1-201ENST00000280527 CENPBP07199 599 aaPredicted RBP34.95■■■■□ 3.19
CRIM1-201ENST00000280527 TTBK1Q5TCY1 1321 aaPredicted RBP34.91■■■■□ 3.18
CRIM1-201ENST00000280527 APLP2Q06481 763 aa34.9■■■■□ 3.18
CRIM1-201ENST00000280527 CCER1Q8TC90 406 aaPredicted RBP34.77■■■■□ 3.16
CRIM1-201ENST00000280527 NISCHQ9Y2I1 1504 aa34.68■■■■□ 3.14
CRIM1-201ENST00000280527 MYT1Q01538 1121 aa34.66■■■■□ 3.14
CRIM1-201ENST00000280527 FAM9AQ8IZU1 332 aaPredicted RBP34.62■■■■□ 3.13
CRIM1-201ENST00000280527 YTHDC1Q96MU7 727 aaKnown RBP34.37■■■■□ 3.09
CRIM1-201ENST00000280527 ZEB1P37275 1124 aaPredicted RBP34.31■■■■□ 3.08
CRIM1-201ENST00000280527 RANGAP1P46060 587 aaPredicted RBP34.2■■■■□ 3.07
CRIM1-201ENST00000280527 NEFLP07196 543 aa34.14■■■■□ 3.06
CRIM1-201ENST00000280527 ATP1B4Q9UN42 357 aaPredicted RBP33.88■■■■□ 3.01
CRIM1-201ENST00000280527 TRIM41Q8WV44 630 aa33.47■■■□□ 2.95
CRIM1-201ENST00000280527 PPARGC1BQ86YN6 1023 aaKnown RBP33.41■■■□□ 2.94
CRIM1-201ENST00000280527 DAXXQ9UER7 740 aaPredicted RBP33.36■■■□□ 2.93
CRIM1-201ENST00000280527 UBTFP17480 764 aaKnown RBP33.28■■■□□ 2.92
CRIM1-201ENST00000280527 HRCP23327 699 aa33.21■■■□□ 2.91
CRIM1-201ENST00000280527 TRIM26Q12899 539 aaPredicted RBP33.03■■■□□ 2.88
CRIM1-201ENST00000280527 POLR3GLQ9BT43 218 aa32.88■■■□□ 2.85
CRIM1-201ENST00000280527 RTL5Q5HYW3 569 aaPredicted RBP32.84■■■□□ 2.85
CRIM1-201ENST00000280527 CNGB1Q14028 1251 aaPredicted RBP32.79■■■□□ 2.84
CRIM1-201ENST00000280527 MYT1LQ9UL68 1186 aa32.7■■■□□ 2.82
CRIM1-201ENST00000280527 ITGAEP38570 1179 aa32.68■■■□□ 2.82
CRIM1-201ENST00000280527 ZNF316A6NFI3 1004 aaPredicted RBP32.62■■■□□ 2.81
CRIM1-201ENST00000280527 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.51■■■□□ 2.8
CRIM1-201ENST00000280527 HNRNPUL2Q1KMD3 747 aaKnown RBP32.51■■■□□ 2.8
CRIM1-201ENST00000280527 DIEXFQ68CQ4 756 aaKnown RBP32.45■■■□□ 2.79
CRIM1-201ENST00000280527 CLSPNQ9HAW4 1339 aa32.4■■■□□ 2.78
CRIM1-201ENST00000280527 LOC105371045A0A1W2PR82 267 aa32.38■■■□□ 2.77
CRIM1-201ENST00000280527 BCANQ96GW7 911 aa32.38■■■□□ 2.77
CRIM1-201ENST00000280527 CHIC1Q5VXU3 224 aa32.38■■■□□ 2.77
CRIM1-201ENST00000280527 GTF3C3Q9Y5Q9 886 aa32.32■■■□□ 2.76
CRIM1-201ENST00000280527 SLC4A1APQ9BWU0 796 aaKnown RBP32.17■■■□□ 2.74
CRIM1-201ENST00000280527 CDK11AQ9UQ88 783 aaPredicted RBP31.93■■■□□ 2.7
CRIM1-201ENST00000280527 EIF5BO60841 1220 aaKnown RBP31.73■■■□□ 2.67
CRIM1-201ENST00000280527 NEUROD1Q13562 356 aa31.65■■■□□ 2.66
CRIM1-201ENST00000280527 ACIN1Q9UKV3 1341 aaKnown RBP31.59■■■□□ 2.65
CRIM1-201ENST00000280527 ANP32CO43423 234 aa31.56■■■□□ 2.64
CRIM1-201ENST00000280527 FAM50AQ14320 339 aaKnown RBP31.53■■■□□ 2.64
CRIM1-201ENST00000280527 BCL11AQ9H165 835 aa31.52■■■□□ 2.64
CRIM1-201ENST00000280527 NPM2Q86SE8 214 aaKnown RBP31.47■■■□□ 2.63
CRIM1-201ENST00000280527 TRIM52Q96A61 297 aa31.46■■■□□ 2.63
CRIM1-201ENST00000280527 ANP32AP39687 249 aaKnown RBP31.45■■■□□ 2.63
CRIM1-201ENST00000280527 ZBTB47Q9UFB7 747 aaPredicted RBP31.4■■■□□ 2.62
CRIM1-201ENST00000280527 ZNF326Q5BKZ1 582 aaKnown RBP31.32■■■□□ 2.6
CRIM1-201ENST00000280527 CANXP27824 592 aaKnown RBP31.3■■■□□ 2.6
CRIM1-201ENST00000280527 SLC24A1O60721 1099 aa31.2■■■□□ 2.59
CRIM1-201ENST00000280527 FKBP8Q14318 412 aa31.14■■■□□ 2.58
CRIM1-201ENST00000280527 GLIPR1L2Q4G1C9 344 aa31.13■■■□□ 2.57
CRIM1-201ENST00000280527 NBR1Q14596 966 aa31.05■■■□□ 2.56
CRIM1-201ENST00000280527 ANP32BQ92688 251 aaKnown RBP31.03■■■□□ 2.56
CRIM1-201ENST00000280527 FBLN2P98095 1184 aa30.93■■■□□ 2.54
CRIM1-201ENST00000280527 ARXQ96QS3 562 aa30.9■■■□□ 2.54
CRIM1-201ENST00000280527 HSP90AA1P07900 732 aaKnown RBP30.85■■■□□ 2.53
CRIM1-201ENST00000280527 PABPN1Q86U42 306 aaKnown RBP eCLIP30.85■■■□□ 2.53
CRIM1-201ENST00000280527 ARID3CA6NKF2 412 aa30.79■■■□□ 2.52
CRIM1-201ENST00000280527 HNRNPUQ00839 825 aaKnown RBP eCLIP30.69■■■□□ 2.5
CRIM1-201ENST00000280527 NEFMP07197 916 aa30.69■■■□□ 2.5
CRIM1-201ENST00000280527 SCAF1Q9H7N4 1312 aaKnown RBP30.69■■■□□ 2.5
CRIM1-201ENST00000280527 UPF2Q9HAU5 1272 aaKnown RBP30.64■■■□□ 2.5
CRIM1-201ENST00000280527 P3H3Q8IVL6 736 aa30.62■■■□□ 2.49
CRIM1-201ENST00000280527 FAM9BQ8IZU0 186 aa30.6■■■□□ 2.49
CRIM1-201ENST00000280527 SALL2Q9Y467 1007 aaPredicted RBP30.56■■■□□ 2.48
CRIM1-201ENST00000280527 CCDC136Q96JN2 1154 aa30.53■■■□□ 2.48
CRIM1-201ENST00000280527 ZNF777Q9ULD5 760 aaPredicted RBP30.51■■■□□ 2.48
CRIM1-201ENST00000280527 DDX10Q13206 875 aaKnown RBP30.5■■■□□ 2.47
CRIM1-201ENST00000280527 IRX6P78412 446 aaPredicted RBP30.47■■■□□ 2.47
CRIM1-201ENST00000280527 PLPPR3Q6T4P5 718 aa30.41■■■□□ 2.46
CRIM1-201ENST00000280527 ABCC9O60706 1549 aa30.36■■■□□ 2.45
CRIM1-201ENST00000280527 CHGAP10645 457 aaKnown RBP30.29■■■□□ 2.44
CRIM1-201ENST00000280527 TONSLQ96HA7 1378 aa30.24■■■□□ 2.43
CRIM1-201ENST00000280527 ANP32EQ9BTT0 268 aa30.23■■■□□ 2.43
CRIM1-201ENST00000280527 ESF1Q9H501 851 aaKnown RBP30.21■■■□□ 2.43
CRIM1-201ENST00000280527 MIER1Q8N108 512 aa30.21■■■□□ 2.43
CRIM1-201ENST00000280527 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.2■■■□□ 2.43
CRIM1-201ENST00000280527 RTN4Q9NQC3 1192 aaKnown RBP30.19■■■□□ 2.42
CRIM1-201ENST00000280527 STAG3Q9UJ98 1225 aa30.18■■■□□ 2.42
CRIM1-201ENST00000280527 TRIM44Q96DX7 344 aaPredicted RBP30.15■■■□□ 2.42
CRIM1-201ENST00000280527 TMC1Q8TDI8 760 aa30.14■■■□□ 2.42
CRIM1-201ENST00000280527 MRS2Q9HD23 443 aa30.09■■■□□ 2.41
CRIM1-201ENST00000280527 TNNT2P45379 298 aaPredicted RBP30.01■■■□□ 2.39
CRIM1-201ENST00000280527 DDRGK1Q96HY6 314 aa29.99■■■□□ 2.39
CRIM1-201ENST00000280527 HIRIP3Q9BW71 556 aaPredicted RBP29.98■■■□□ 2.39
CRIM1-201ENST00000280527 CSRNP3Q8WYN3 585 aa29.96■■■□□ 2.39
CRIM1-201ENST00000280527 NAP1L5Q96NT1 182 aaPredicted RBP29.96■■■□□ 2.39
CRIM1-201ENST00000280527 WDR43Q15061 677 aaKnown RBP eCLIP29.95■■■□□ 2.39
CRIM1-201ENST00000280527 BECN1Q14457 450 aa29.93■■■□□ 2.38
CRIM1-201ENST00000280527 NCLP19338 710 aaKnown RBP29.91■■■□□ 2.38
CRIM1-201ENST00000280527 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.89■■■□□ 2.371e-11■■□□□ 11.4
CRIM1-201ENST00000280527 LAS1LQ9Y4W2 734 aaKnown RBP29.86■■■□□ 2.37
CRIM1-201ENST00000280527 PTMAP06454 111 aaKnown RBP29.85■■■□□ 2.37
CRIM1-201ENST00000280527 DNTTIP2Q5QJE6 756 aaKnown RBP29.84■■■□□ 2.37
CRIM1-201ENST00000280527 SENP3-EIF4A1A0A087X0R7 540 aa29.83■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms