RNA–Protein interactions for RNA: ENST00000559070.5

RNF213-207, Transcript of ring finger protein 213, humanhuman

TSL 1 (best)

Gene RNF213, Length 4,644 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213-207ENST00000559070 DCAF8L2P0C7V8 631 aa20.63■□□□□ 0.89
RNF213-207ENST00000559070 NISCHQ9Y2I1 1504 aa20.59■□□□□ 0.89
RNF213-207ENST00000559070 SUPT5HO00267 1087 aaKnown RBP19.2■□□□□ 0.66
RNF213-207ENST00000559070 SHROOM4Q9ULL8 1493 aa19.19■□□□□ 0.66
RNF213-207ENST00000559070 EHMT2Q96KQ7 1210 aa18.37■□□□□ 0.53
RNF213-207ENST00000559070 FAM9AQ8IZU1 332 aaPredicted RBP18.05■□□□□ 0.48
RNF213-207ENST00000559070 ABCC9O60706 1549 aa17.99■□□□□ 0.47
RNF213-207ENST00000559070 TRIM41Q8WV44 630 aa17.81■□□□□ 0.44
RNF213-207ENST00000559070 APLP2Q06481 763 aa17.81■□□□□ 0.44
RNF213-207ENST00000559070 RANGAP1P46060 587 aaPredicted RBP17.74■□□□□ 0.43
RNF213-207ENST00000559070 PABPN1Q86U42 306 aaKnown RBP eCLIP17.73■□□□□ 0.43
RNF213-207ENST00000559070 TTBK1Q5TCY1 1321 aaPredicted RBP17.62■□□□□ 0.41
RNF213-207ENST00000559070 UBTFP17480 764 aaKnown RBP17.54■□□□□ 0.4
RNF213-207ENST00000559070 ATP1B4Q9UN42 357 aaPredicted RBP17.52■□□□□ 0.39
RNF213-207ENST00000559070 PCGF6Q9BYE7 350 aa17.25■□□□□ 0.35
RNF213-207ENST00000559070 CHIC1Q5VXU3 224 aa17.15■□□□□ 0.34
RNF213-207ENST00000559070 PPARGC1BQ86YN6 1023 aaKnown RBP17.1■□□□□ 0.33
RNF213-207ENST00000559070 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.07■□□□□ 0.32
RNF213-207ENST00000559070 HNRNPUL2Q1KMD3 747 aaKnown RBP17.07■□□□□ 0.32
RNF213-207ENST00000559070 LOC105371045A0A1W2PR82 267 aa17.04■□□□□ 0.32
RNF213-207ENST00000559070 CCDC180Q9P1Z9 1646 aa17.01■□□□□ 0.31
RNF213-207ENST00000559070 ZCCHC6Q5VYS8 1495 aaKnown RBP17.01■□□□□ 0.31
RNF213-207ENST00000559070 SCRIBQ14160 1630 aa17■□□□□ 0.31
RNF213-207ENST00000559070 CCER1Q8TC90 406 aaPredicted RBP16.95■□□□□ 0.3
RNF213-207ENST00000559070 MYT1LQ9UL68 1186 aa16.87■□□□□ 0.29
RNF213-207ENST00000559070 ITGAEP38570 1179 aa16.85■□□□□ 0.29
RNF213-207ENST00000559070 FBLN2P98095 1184 aa16.85■□□□□ 0.29
RNF213-207ENST00000559070 RB1CC1Q8TDY2 1594 aa16.74■□□□□ 0.27
RNF213-207ENST00000559070 ZEB1P37275 1124 aaPredicted RBP16.66■□□□□ 0.26
RNF213-207ENST00000559070 TRIM26Q12899 539 aaPredicted RBP16.65■□□□□ 0.26
RNF213-207ENST00000559070 NACADO15069 1562 aa16.59■□□□□ 0.25
RNF213-207ENST00000559070 CSRNP3Q8WYN3 585 aa16.56■□□□□ 0.24
RNF213-207ENST00000559070 P3H3Q8IVL6 736 aa16.53■□□□□ 0.24
RNF213-207ENST00000559070 FAM50AQ14320 339 aaKnown RBP16.5■□□□□ 0.23
RNF213-207ENST00000559070 ARID3CA6NKF2 412 aa16.48■□□□□ 0.23
RNF213-207ENST00000559070 RSF1Q96T23 1441 aaPredicted RBP16.38■□□□□ 0.21
RNF213-207ENST00000559070 POLR3GLQ9BT43 218 aa16.36■□□□□ 0.21
RNF213-207ENST00000559070 PELP1Q8IZL8 1130 aaKnown RBP16.34■□□□□ 0.21
RNF213-207ENST00000559070 TRIM52Q96A61 297 aa16.32■□□□□ 0.2
RNF213-207ENST00000559070 BAZ1BQ9UIG0 1483 aaKnown RBP16.29■□□□□ 0.2
RNF213-207ENST00000559070 DCAF1Q9Y4B6 1507 aa16.28■□□□□ 0.2
RNF213-207ENST00000559070 CECR2Q9BXF3 1484 aa16.25■□□□□ 0.19
RNF213-207ENST00000559070 CHMP7Q8WUX9 453 aaPredicted RBP16.25■□□□□ 0.19
RNF213-207ENST00000559070 ZNF777Q9ULD5 760 aaPredicted RBP16.22■□□□□ 0.19
RNF213-207ENST00000559070 CDK11AQ9UQ88 783 aaPredicted RBP16.22■□□□□ 0.19
RNF213-207ENST00000559070 CNGB1Q14028 1251 aaPredicted RBP16.22■□□□□ 0.19
RNF213-207ENST00000559070 CENPBP07199 599 aaPredicted RBP16.22■□□□□ 0.19
RNF213-207ENST00000559070 NPM1P06748 294 aaKnown RBP eCLIP16.19■□□□□ 0.18
RNF213-207ENST00000559070 YTHDC1Q96MU7 727 aaKnown RBP16.19■□□□□ 0.18
RNF213-207ENST00000559070 BAZ1AQ9NRL2 1556 aaPredicted RBP16.15■□□□□ 0.18
RNF213-207ENST00000559070 NEUROD1Q13562 356 aa16.15■□□□□ 0.18
RNF213-207ENST00000559070 HRCP23327 699 aa16.13■□□□□ 0.17
RNF213-207ENST00000559070 SLC4A1APQ9BWU0 796 aaKnown RBP16.12■□□□□ 0.17
RNF213-207ENST00000559070 ERCC6Q03468 1493 aa16.08■□□□□ 0.16
RNF213-207ENST00000559070 ZNF326Q5BKZ1 582 aaKnown RBP16.07■□□□□ 0.16
RNF213-207ENST00000559070 WRNQ14191 1432 aaPredicted RBP eCLIP16.07■□□□□ 0.16
RNF213-207ENST00000559070 NEFLP07196 543 aa15.98■□□□□ 0.15
RNF213-207ENST00000559070 MROH2BQ7Z745 1585 aa15.97■□□□□ 0.15
RNF213-207ENST00000559070 ESF1Q9H501 851 aaKnown RBP15.96■□□□□ 0.15
RNF213-207ENST00000559070 BCANQ96GW7 911 aa15.94■□□□□ 0.14
RNF213-207ENST00000559070 MYO15BQ96JP2 1530 aa15.93■□□□□ 0.14
RNF213-207ENST00000559070 KIF27Q86VH2 1401 aa15.92■□□□□ 0.14
RNF213-207ENST00000559070 PLPPR3Q6T4P5 718 aa15.91■□□□□ 0.14
RNF213-207ENST00000559070 KCNH8Q96L42 1107 aa15.91■□□□□ 0.14
RNF213-207ENST00000559070 CHIC2Q9UKJ5 165 aa15.9■□□□□ 0.14
RNF213-207ENST00000559070 MTUS2Q5JR59 1369 aa15.9■□□□□ 0.14
RNF213-207ENST00000559070 CLIP1P30622 1438 aa15.89■□□□□ 0.14
RNF213-207ENST00000559070 EEA1Q15075 1411 aa15.87■□□□□ 0.13
RNF213-207ENST00000559070 TSPY4P0CV99 314 aa15.85■□□□□ 0.13
RNF213-207ENST00000559070 TSPY10P0CW01 314 aa15.85■□□□□ 0.13
RNF213-207ENST00000559070 SMARCA2P51531 1590 aa15.85■□□□□ 0.13
RNF213-207ENST00000559070 CHGAP10645 457 aaKnown RBP15.84■□□□□ 0.13
RNF213-207ENST00000559070 PLEKHD1A6NEE1 506 aa15.83■□□□□ 0.13
RNF213-207ENST00000559070 CCDC88BA6NC98 1476 aa15.83■□□□□ 0.12
RNF213-207ENST00000559070 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.82■□□□□ 0.128e-7■■□□□ 13.6
RNF213-207ENST00000559070 PDS5BQ9NTI5 1447 aa15.81■□□□□ 0.12
RNF213-207ENST00000559070 STAG3Q9UJ98 1225 aa15.8■□□□□ 0.12
RNF213-207ENST00000559070 GOLGA3Q08378 1498 aa15.79■□□□□ 0.12
RNF213-207ENST00000559070 DIEXFQ68CQ4 756 aaKnown RBP15.79■□□□□ 0.12
RNF213-207ENST00000559070 CUX2O14529 1486 aa15.77■□□□□ 0.12
RNF213-207ENST00000559070 TDRD9Q8NDG6 1382 aaKnown RBP15.73■□□□□ 0.11
RNF213-207ENST00000559070 ATAD2BQ9ULI0 1458 aa15.73■□□□□ 0.11
RNF213-207ENST00000559070 CARMIL1Q5VZK9 1371 aa15.73■□□□□ 0.11
RNF213-207ENST00000559070 CADPSQ9ULU8 1353 aa15.73■□□□□ 0.11
RNF213-207ENST00000559070 CEP162Q5TB80 1403 aa15.73■□□□□ 0.11
RNF213-207ENST00000559070 CEP164Q9UPV0 1460 aa15.7■□□□□ 0.1
RNF213-207ENST00000559070 SOGA1O94964 1423 aa15.7■□□□□ 0.1
RNF213-207ENST00000559070 WIZO95785 1651 aa15.68■□□□□ 0.1
RNF213-207ENST00000559070 RRP7BPQ9NSQ0 103 aa15.67■□□□□ 0.1
RNF213-207ENST00000559070 CFDP1Q9UEE9 299 aaPredicted RBP15.67■□□□□ 0.1
RNF213-207ENST00000559070 TNIKQ9UKE5 1360 aa15.66■□□□□ 0.1
RNF213-207ENST00000559070 TONSLQ96HA7 1378 aa15.65■□□□□ 0.1
RNF213-207ENST00000559070 ABCC8Q09428 1581 aa15.63■□□□□ 0.09
RNF213-207ENST00000559070 ANP32CO43423 234 aa15.63■□□□□ 0.09
RNF213-207ENST00000559070 ERICH6Q7L0X2 663 aa15.61■□□□□ 0.09
RNF213-207ENST00000559070 TOP2AP11388 1531 aaKnown RBP15.61■□□□□ 0.09
RNF213-207ENST00000559070 EIF4G1Q04637 1599 aaKnown RBP15.59■□□□□ 0.09
RNF213-207ENST00000559070 ZNF316A6NFI3 1004 aaPredicted RBP15.59■□□□□ 0.09
RNF213-207ENST00000559070 TRHP20396 242 aaPredicted RBP15.58■□□□□ 0.08
RNF213-207ENST00000559070 SMARCA4P51532 1647 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 209.9 ms