RNA–Protein interactions for RNA: ENST00000520898.5

UBR5-208, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

TSL 3

Gene UBR5, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-208ENST00000520898 CHIC1Q5VXU3 224 aa16.87■□□□□ 0.29
UBR5-208ENST00000520898 AEBP2Q6ZN18 517 aaPredicted RBP16.8■□□□□ 0.28
UBR5-208ENST00000520898 PHF23Q9BUL5 403 aaPredicted RBP14.89□□□□□ -0.03
UBR5-208ENST00000520898 SENP3Q9H4L4 574 aaPredicted RBP14.19□□□□□ -0.14
UBR5-208ENST00000520898 PLPPR3Q6T4P5 718 aa13.92□□□□□ -0.18
UBR5-208ENST00000520898 NISCHQ9Y2I1 1504 aa13.22□□□□□ -0.29
UBR5-208ENST00000520898 FOXD1Q16676 465 aa13.1□□□□□ -0.31
UBR5-208ENST00000520898 ADRA2BP18089 450 aa13.01□□□□□ -0.33
UBR5-208ENST00000520898 PPP6R1Q9UPN7 881 aa12.98□□□□□ -0.33
UBR5-208ENST00000520898 KCNA4P22459 653 aa12.57□□□□□ -0.4
UBR5-208ENST00000520898 PIAS4Q8N2W9 510 aaPredicted RBP12.48□□□□□ -0.41
UBR5-208ENST00000520898 PPP4R3CPQ6ZMV5 832 aa12.32□□□□□ -0.44
UBR5-208ENST00000520898 EHMT2Q96KQ7 1210 aa12.25□□□□□ -0.45
UBR5-208ENST00000520898 NCBP3Q53F19 620 aaKnown RBP12.14□□□□□ -0.47
UBR5-208ENST00000520898 ABCC9O60706 1549 aa12.11□□□□□ -0.47
UBR5-208ENST00000520898 SLC4A1APQ9BWU0 796 aaKnown RBP12.06□□□□□ -0.48
UBR5-208ENST00000520898 CCDC180Q9P1Z9 1646 aa11.97□□□□□ -0.49
UBR5-208ENST00000520898 NPM3O75607 178 aaKnown RBP11.96□□□□□ -0.49
UBR5-208ENST00000520898 MSH5O43196 834 aa11.92□□□□□ -0.5
UBR5-208ENST00000520898 SCAF1Q9H7N4 1312 aaKnown RBP11.9□□□□□ -0.5
UBR5-208ENST00000520898 CSRNP3Q8WYN3 585 aa11.89□□□□□ -0.51
UBR5-208ENST00000520898 CNKSR2Q8WXI2 1034 aa11.88□□□□□ -0.51
UBR5-208ENST00000520898 MAPK8IP2Q13387 824 aaPredicted RBP11.65□□□□□ -0.54
UBR5-208ENST00000520898 DNAJC5BQ9UF47 199 aa11.59□□□□□ -0.55
UBR5-208ENST00000520898 ZBTB22O15209 634 aa11.57□□□□□ -0.56
UBR5-208ENST00000520898 RNF216Q9NWF9 866 aaPredicted RBP11.53□□□□□ -0.56
UBR5-208ENST00000520898 RB1CC1Q8TDY2 1594 aa11.46□□□□□ -0.57
UBR5-208ENST00000520898 FOXD4L1Q9NU39 408 aa11.44□□□□□ -0.58
UBR5-208ENST00000520898 DMRT2Q9Y5R5 561 aa11.4□□□□□ -0.58
UBR5-208ENST00000520898 HOXD11P31277 338 aaPredicted RBP11.35□□□□□ -0.59
UBR5-208ENST00000520898 NACADO15069 1562 aa11.35□□□□□ -0.59
UBR5-208ENST00000520898 UNC13AQ9UPW8 1703 aa11.25□□□□□ -0.61
UBR5-208ENST00000520898 PABPN1Q86U42 306 aaKnown RBP eCLIP11.23□□□□□ -0.61
UBR5-208ENST00000520898 BICRAQ9NZM4 1560 aa11.17□□□□□ -0.62
UBR5-208ENST00000520898 SLC4A2P04920 1241 aa11.17□□□□□ -0.62
UBR5-208ENST00000520898 MYO15BQ96JP2 1530 aa11.15□□□□□ -0.62
UBR5-208ENST00000520898 DCAF8L2P0C7V8 631 aa11.15□□□□□ -0.62
UBR5-208ENST00000520898 MYCNP04198 464 aaPredicted RBP11.04□□□□□ -0.64
UBR5-208ENST00000520898 ATXN8OSP0DMR3 200 aa11□□□□□ -0.65
UBR5-208ENST00000520898 SHROOM4Q9ULL8 1493 aa11□□□□□ -0.65
UBR5-208ENST00000520898 CC2D2AQ9P2K1 1620 aa10.96□□□□□ -0.65
UBR5-208ENST00000520898 CECR2Q9BXF3 1484 aa10.94□□□□□ -0.66
UBR5-208ENST00000520898 DCAF1Q9Y4B6 1507 aa10.93□□□□□ -0.66
UBR5-208ENST00000520898 ZCCHC6Q5VYS8 1495 aaKnown RBP10.91□□□□□ -0.66
UBR5-208ENST00000520898 EIF4G1Q04637 1599 aaKnown RBP10.89□□□□□ -0.67
UBR5-208ENST00000520898 DCAF8L1A6NGE4 600 aa10.88□□□□□ -0.67
UBR5-208ENST00000520898 SCRIBQ14160 1630 aa10.84□□□□□ -0.67
UBR5-208ENST00000520898 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.82□□□□□ -0.683e-9■■□□□ 14
UBR5-208ENST00000520898 DNAJC5Q9H3Z4 198 aa10.78□□□□□ -0.68
UBR5-208ENST00000520898 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.74□□□□□ -0.69
UBR5-208ENST00000520898 HNRNPUL2Q1KMD3 747 aaKnown RBP10.74□□□□□ -0.69
UBR5-208ENST00000520898 FKBP8Q14318 412 aa10.73□□□□□ -0.69
UBR5-208ENST00000520898 SAMD1Q6SPF0 538 aaPredicted RBP10.72□□□□□ -0.69
UBR5-208ENST00000520898 ATF5Q9Y2D1 282 aaPredicted RBP10.7□□□□□ -0.7
UBR5-208ENST00000520898 U3KPZ7 1027 aaPredicted RBP10.69□□□□□ -0.7
UBR5-208ENST00000520898 AMER1Q5JTC6 1135 aaPredicted RBP10.61□□□□□ -0.71
UBR5-208ENST00000520898 RTN4Q9NQC3 1192 aaKnown RBP10.59□□□□□ -0.71
UBR5-208ENST00000520898 CUX2O14529 1486 aa10.55□□□□□ -0.72
UBR5-208ENST00000520898 APLP2Q06481 763 aa10.51□□□□□ -0.73
UBR5-208ENST00000520898 ZNF219Q9P2Y4 722 aaPredicted RBP10.49□□□□□ -0.73
UBR5-208ENST00000520898 NCAPD3P42695 1498 aa10.49□□□□□ -0.73
UBR5-208ENST00000520898 ERCC6Q03468 1493 aa10.45□□□□□ -0.74
UBR5-208ENST00000520898 ATAD2BQ9ULI0 1458 aa10.41□□□□□ -0.74
UBR5-208ENST00000520898 HMGXB3Q12766 1538 aa10.38□□□□□ -0.75
UBR5-208ENST00000520898 SMARCA2P51531 1590 aa10.37□□□□□ -0.75
UBR5-208ENST00000520898 NESP48681 1621 aa10.36□□□□□ -0.75
UBR5-208ENST00000520898 SMARCA4P51532 1647 aa10.36□□□□□ -0.75
UBR5-208ENST00000520898 SLC24A1O60721 1099 aa10.33□□□□□ -0.76
UBR5-208ENST00000520898 THOC2Q8NI27 1593 aaKnown RBP10.32□□□□□ -0.76
UBR5-208ENST00000520898 PEG3Q9GZU2 1588 aa10.28□□□□□ -0.76
UBR5-208ENST00000520898 LAMC3Q9Y6N6 1575 aa10.27□□□□□ -0.76
UBR5-208ENST00000520898 SPDYE4A6NLX3 237 aa10.27□□□□□ -0.77
UBR5-208ENST00000520898 BAZ1BQ9UIG0 1483 aaKnown RBP10.27□□□□□ -0.77
UBR5-208ENST00000520898 TRHP20396 242 aaPredicted RBP10.26□□□□□ -0.77
UBR5-208ENST00000520898 MKRN4PQ13434 485 aaPredicted RBP10.26□□□□□ -0.77
UBR5-208ENST00000520898 BAZ1AQ9NRL2 1556 aaPredicted RBP10.26□□□□□ -0.77
UBR5-208ENST00000520898 RNF39Q9H2S5 420 aa10.25□□□□□ -0.77
UBR5-208ENST00000520898 SPINK5Q9NQ38 1064 aaPredicted RBP10.25□□□□□ -0.77
UBR5-208ENST00000520898 KIF21AQ7Z4S6 1674 aa10.24□□□□□ -0.77
UBR5-208ENST00000520898 FBLN2P98095 1184 aa10.23□□□□□ -0.77
UBR5-208ENST00000520898 FBXO3Q9UK99 471 aa10.23□□□□□ -0.77
UBR5-208ENST00000520898 POLA2Q14181 598 aa10.21□□□□□ -0.77
UBR5-208ENST00000520898 CAPN15O75808 1086 aa10.2□□□□□ -0.78
UBR5-208ENST00000520898 PDS5BQ9NTI5 1447 aa10.2□□□□□ -0.78
UBR5-208ENST00000520898 MROH2BQ7Z745 1585 aa10.18□□□□□ -0.78
UBR5-208ENST00000520898 C1QBPQ07021 282 aaKnown RBP10.16□□□□□ -0.78
UBR5-208ENST00000520898 PROM2Q8N271 834 aa10.16□□□□□ -0.78
UBR5-208ENST00000520898 TRIM41Q8WV44 630 aa10.14□□□□□ -0.79
UBR5-208ENST00000520898 CADPSQ9ULU8 1353 aa10.14□□□□□ -0.79
UBR5-208ENST00000520898 WDR62O43379 1518 aa10.13□□□□□ -0.79
UBR5-208ENST00000520898 MRC2Q9UBG0 1479 aa10.12□□□□□ -0.79
UBR5-208ENST00000520898 ZBTB12Q9Y330 459 aaPredicted RBP10.08□□□□□ -0.8
UBR5-208ENST00000520898 VASPP50552 380 aaPredicted RBP10.07□□□□□ -0.8
UBR5-208ENST00000520898 WIZO95785 1651 aa10.04□□□□□ -0.8
UBR5-208ENST00000520898 ABCB7O75027 752 aa10.04□□□□□ -0.8
UBR5-208ENST00000520898 CEP164Q9UPV0 1460 aa10.03□□□□□ -0.8
UBR5-208ENST00000520898 POTEDQ86YR6 584 aa10.01□□□□□ -0.81
UBR5-208ENST00000520898 OSCARQ8IYS5 282 aa10.01□□□□□ -0.81
UBR5-208ENST00000520898 FANCD2Q9BXW9 1451 aa10.01□□□□□ -0.81
UBR5-208ENST00000520898 CFTRP13569 1480 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms